| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_172 | 1 = | 0 (0.000) | 44 (0.740) | 29/294 | 0.3 | 54.0% | intergenic (–/+60) | –/Xen14_04777 | –/hypothetical protein |
| ? | Xen14_64 | = 2419 | 75 (1.050) | coding (62/699 nt) | Xen14_04183 | hypothetical protein | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGTCACCTTTA > Xen14_172/1‑146 | gctcattacagaaaaaataactttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGGGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTgc > 1:3804417‑M1/64‑150 (MQ=255)gctcattacagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTgc > 1:3084195‑M1/64‑150 (MQ=255)gctcattacagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTgc > 1:3084194‑M1/64‑150 (MQ=255) ttacagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGa > 1:1328270‑M1/59‑150 (MQ=255) ttacagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCAGCAGTTCACCACCTGTTCAAACTCTGCGCTGa > 1:1328268‑M1/59‑150 (MQ=255) ttacagaaaaaataacgttctccaccgacccctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGa > 1:3772087‑M1/59‑150 (MQ=255) acagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAAc > 1:235799‑M1/57‑150 (MQ=255) acagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCACTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAAc > 1:1083232‑M1/57‑150 (MQ=255) acagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCACTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAAc > 1:1083233‑M1/57‑150 (MQ=255) agaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTc < 1:2614290‑M1/96‑1 (MQ=255) agaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTc > 1:2383752‑M1/55‑150 (MQ=255) aaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCaa < 1:1267436‑M1/98‑1 (MQ=255) aaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAac > 1:2811385‑M1/52‑150 (MQ=255) aaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAac > 1:3261643‑M1/52‑150 (MQ=255) aaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAaca < 1:1033715‑M1/100‑1 (MQ=255) aacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACgcag > 1:2318374‑M1/46‑150 (MQ=255) acgttctccatcgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACgcagc > 1:1544937‑M1/45‑150 (MQ=255) acgttctccatcgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACgcagc > 1:1544938‑M1/45‑150 (MQ=255) acgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACgcagc < 1:1351231‑M1/106‑1 (MQ=255) acgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACgcagc > 1:2429640‑M1/45‑150 (MQ=255) tccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTg > 1:3047044‑M1/39‑150 (MQ=255) ccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGa < 1:4180382‑M1/113‑1 (MQ=255) ccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGAccc < 1:2978659‑M1/116‑1 (MQ=255) cgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCcg < 1:3011433‑M1/117‑1 (MQ=255) ctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGcgacga < 1:4159397‑M1/123‑1 (MQ=255) tgtcaggtcgatttcccagagcaccaCGCCGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCgacgac > 1:671749‑M1/27‑150 (MQ=255) gtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGAcc > 1:3060599‑M1/26‑150 (MQ=255) ggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCAttt < 1:1956928‑M1/129‑1 (MQ=255) gatcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCAttt < 1:731433‑M1/129‑1 (MQ=255) tcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTg < 1:552685‑M1/131‑1 (MQ=255) cgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTgc > 1:3981325‑M1/19‑150 (MQ=255) cgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTgc > 1:4129243‑M1/19‑150 (MQ=255) cgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACCCAGCATACTGACCCGCGACGACCATTTTgc > 1:3175614‑M1/19‑150 (MQ=255) gatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCACGACGACCCTTTTgcg < 1:2872901‑M1/133‑1 (MQ=255) atttcccagagcaccaCGCTGGCCGACTGCTCCGTACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGCCGACCATTTTgcgc < 1:4235097‑M1/134‑1 (MQ=255) tttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCa > 1:2449610‑M1/16‑150 (MQ=255) tttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCa > 1:1205432‑M1/16‑150 (MQ=255) ttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAg < 1:2256406‑M1/136‑1 (MQ=255) ttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCCGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAg > 1:421296‑M1/15‑150 (MQ=255) tcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGTATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAgg > 1:2217181‑M1/14‑150 (MQ=255) cccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGt < 1:1662143‑M1/138‑1 (MQ=255) cccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGt < 1:1990933‑M1/138‑1 (MQ=255) cccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGt < 1:1662144‑M1/138‑1 (MQ=255) accaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGTCACCTTTa < 1:2104813‑M1/146‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGTCACCTTTA > Xen14_172/1‑146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |