| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_119 | = 3208 | 0 (0.000) | 54 (0.070) | 34/246 | 1.5 | 100% | intergenic (+81/–) | crcB/– | Putative fluoride ion transporter CrcB/– |
| ? | Xen14_168 | 26 = | 0 (0.000) | intergenic (–/+34) | –/Xen14_04774 | –/IS200/IS605 family transposase IS200C | |||||
AATCTTTTGGGGTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_119/3059‑3208 | aaTCTTTTGGGGTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACa > 1:697691/1‑150 (MQ=255) ttttGGGGTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcg > 1:1559440‑M1/1‑146 (MQ=255) ttGGGGTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgca < 1:1963116‑M1/150‑7 (MQ=255) ggTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacg > 1:2629370‑M1/1‑140 (MQ=255) ggTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacg > 1:573263‑M1/1‑140 (MQ=255) cTTTTGCCATGACCGCACTGGGTTTCTGGCTGTTTTCGGCCTCGACCGCACACTAAAGACCAAATAAATATCCTACGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatc > 1:3829458‑M1/1‑137 (MQ=255) tttGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctg < 1:732051‑M1/150‑16 (MQ=255) tttGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctg < 1:1443757‑M1/150‑16 (MQ=255) ccATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacat > 1:4143705‑M1/1‑131 (MQ=255) gACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgc > 1:3112385‑M1/1‑127 (MQ=255) gACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgc > 1:3441770‑M1/1‑127 (MQ=255) ccGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcat > 1:1854710‑M1/1‑125 (MQ=255) gCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatcc > 1:342923‑M1/1‑123 (MQ=255) cTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaac < 1:2928111‑M1/150‑31 (MQ=255) cTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcg > 1:1768902‑M1/1‑116 (MQ=255) cTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcg > 1:2141015‑M1/1‑116 (MQ=255) cTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcg < 1:887376‑M1/150‑35 (MQ=255) cTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCAGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcatacgatctgccatttgcatccaacttcg > 1:527194‑M1/1‑116 (MQ=255) tttCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgt < 1:1368175‑M1/150‑36 (MQ=255) gCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttactta > 1:976075‑M1/1‑109 (MQ=255) tGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacg > 1:4011235‑M1/1‑107 (MQ=255) tGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGGTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacg < 1:3821508‑M1/150‑44 (MQ=255) gTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGTCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatc < 1:4197968‑M1/132‑27 (MQ=255) ttttCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggc < 1:1455981‑M1/150‑46 (MQ=255) ttCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggccc > 1:3358762‑M1/1‑103 (MQ=255) tCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccg < 1:1565862‑M1/150‑49 (MQ=255) ggCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgta < 1:29389‑M1/150‑51 (MQ=255) ccTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaa > 1:3619494‑M1/1‑98 (MQ=255) ccTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaa > 1:2915249‑M1/1‑98 (MQ=255) ccTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaa > 1:209179‑M1/1‑98 (MQ=255) cTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaac > 1:1670088‑M1/1‑97 (MQ=255) aaCCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg < 1:3625532‑M1/150‑57 (MQ=255) aaCCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg < 1:1857565‑M1/150‑57 (MQ=255) aCCGCACACTAAAGACCAAGTAAATATCCTCCGGCATAGCCGGAGGTTTGTCAAGTGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggc < 1:1221364‑M1/150‑58 (MQ=255) aCCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAGGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggc < 1:1626838‑M1/150‑58 (MQ=255) aCCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggc < 1:2133532‑M1/150‑58 (MQ=255) aCCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCACCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggc < 1:2202564‑M1/150‑58 (MQ=255) cGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctg > 1:1721187‑M1/1‑91 (MQ=255) acacTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgccc < 1:2884922‑M1/150‑63 (MQ=255) cacTAAAGACCAAATAAATATCCTCCGGAATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccg < 1:1054711‑M1/150‑64 (MQ=255) cacTAAAGACCAAATAAATATCCTCCGGAATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccg < 1:1054710‑M1/150‑64 (MQ=255) cTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcgcacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccgga > 1:4129701‑M1/1‑85 (MQ=255) aGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagg < 1:2386422‑M1/150‑70 (MQ=255) aGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagg < 1:329639‑M1/150‑70 (MQ=255) aCCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggataggga > 1:2579794‑M1/1‑79 (MQ=255) cAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgtacacgatctgacatttgcatcccacttcgttacttacggcccgtaaacgggctgcccggatagggaat > 1:868294‑M1/1‑77 (MQ=255) cAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaat > 1:4231753‑M1/1‑77 (MQ=255) cAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaat > 1:2288181‑M1/1‑77 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacggtctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc > 1:393435‑M1/1‑76 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:1888913‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:3807122‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:1083961‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:1083960‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacagttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:510738‑M1/150‑75 (MQ=255) aaataaatATCCACCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:3769582‑M1/150‑75 (MQ=255) | AATCTTTTGGGGTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_119/3059‑3208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |