| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_192 | 1 = | 0 (0.000) | 52 (0.500) +A |
39/294 | 1.5 | 100% | intergenic (–/+152) | –/Xen14_04785 | –/hypothetical protein |
| ? | Xen14_198 | = 431 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CTTTTCCTGCATTCAGCAGACTACCCGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_192/149‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTTAAAAAATAGCTAAAGGAAT < Xen14_198/431‑286 | CTTTTCCTGCATTCAGCAGACTACCCGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTA > 1:2373689/1‑150CTTTTCCTGCATTCAGCAGACTACCCGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTA > 1:2373690/1‑150CTTTTCCTGCATTCAGCAGACTACCCGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTA > 1:2373691/1‑150 GCATTCAGCAGACTACCCGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTT‑CCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTC > 1:3467613/1‑150 ATTCAGCAGACTACCCGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCG < 1:3066608/150‑1 CTACCCGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGG > 1:2994160/1‑150 CGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTC > 1:1524138/1‑150 GATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCT < 1:2763862/150‑1 ATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTC > 1:1449906/1‑150 ATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTC > 1:1449908/1‑150 ATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTC > 1:1765461/1‑150 GAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGAC < 1:34936/150‑1 ATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCG > 1:55053/1‑150 ATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCG > 1:55054/1‑150 ATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCG > 1:55052/1‑150 ATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCG < 1:3651312/150‑1 CGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGC > 1:1741076/1‑150 GGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCG > 1:2202111/1‑150 ACCCTTGAGTTTCCGTTGACTCTACCCCCGGGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCG < 1:326878/150‑1 CCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTT < 1:2284692/150‑1 CCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTT < 1:2693287/150‑1 CCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTT < 1:3838967/150‑1 CCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTT < 1:1218602/150‑1 tgatTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCT < 1:3859678/146‑1 GTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGTCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCG > 1:4175976/1‑150 GTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGTCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCG > 1:3195539/1‑150 CTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCC > 1:2097256/1‑150 ACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCACCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTAT > 1:380819/1‑150 CCCGTGTGACAGGGCGGTGGTTTATCCTTGCCAAAACACGCCAAGAATCATCATCATTGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCC < 1:1942762/143‑1 CGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCT < 1:2232799/150‑1 TACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGC < 1:67072/116‑1 ACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCG < 1:2752495/150‑1 AAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGC > 1:399210/1‑150 AAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGC > 1:399209/1‑150 AAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCAGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGC > 1:681246/1‑150 GACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGT > 1:374993/1‑150 GGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGC < 1:3634346/150‑1 GGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGC > 1:1070476/1‑150 GGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGC > 1:3555249/1‑150 CCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGG > 1:93495/1‑150 CCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGA > 1:1659412/1‑150 CCTGCCCAAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGA < 1:807167/150‑1 AAACACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAA < 1:2414490/150‑1 ACGCCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATAC < 1:3104591/150‑1 CCAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGCCTCGGATACGAAAATACGAT > 1:1191261/1‑150 CAAGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATT > 1:1565692/1‑150 AAGAATCATCATCATCGTGATTATCGTCCGTCGTTACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTT < 1:3188056/150‑1 AGAATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCATGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTTA > 1:4007863/1‑150 ATCATCATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTTAAAA > 1:2786467/1‑150 CATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCTTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTTAAAAAATAG < 1:2418676/150‑1 CATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTTAAAAAATAG > 1:2072889/1‑150 CATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTTAAAAAATAG > 1:2072888/1‑150 ATCATCGTGATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTTAAAAAATAGC < 1:1774509/150‑1 ATTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAGAATACGATTTAAAAAATAGCTAAAGGAAT > 1:3606516/1‑150 TTATCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCCGGCGTTCCTCCGTCCTCATCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATAC < 1:1383026/125‑1 | CTTTTCCTGCATTCAGCAGACTACCCGCGAAGGATCGAAAGGATACGGTTTAACTGGAAACCCTTGAGTTTCCGTTGACTCTACCCCCGTGTTACAAGACGGGGGTTTATCCCTGCCCAAACACGCCAAGAATCATCATCATCGTGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_192/149‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCGTCCGTCGTCACGGCAGGCGCTCCCGTCCTCGACCCTGCGGGCGGGTGCGGCTGGCGTTCCTCCGTCCTCCTCCCCTTATCTTCTTCATCGGCGTGCTGGCGTCTCGGATACGAAAATACGATTTAAAAAATAGCTAAAGGAAT < Xen14_198/431‑286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |