| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_168 | 1 = | 0 (0.000) | 38 (0.050) | 24/248 | 1.6 | 100% | intergenic (–/+59) | –/Xen14_04774 | –/IS200/IS605 family transposase IS200C |
| ? | Xen14_21 | 25 = | 0 (0.000) | intergenic (–/+52) | –/add | –/Adenosine deaminase | |||||
TTCCCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_168/97‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGAC > Xen14_21/25‑144 TTCCCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGT > 1:702684/1‑150TTCCCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGT > 1:702683/1‑150 TCCCTATCCTGGCAGCCCGTTTACGGGCCGTAATTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTT < 1:3805387/150‑1 TCCCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTc > 1:278997/1‑149 TCCCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTT > 1:3597771/1‑150 CCCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAAACTCCGGCTATGCCGGAGGATATTTATTTGTct > 1:4107665/1‑148 tCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAGTGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGTCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTctg < 1:1348393/149‑4 CCTATCCTGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTctg < 1:423249/150‑4 CCTATCCGGGCAGCCCGTTTACGGGCCGTATGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTctg > 1:3124997/1‑147 CCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGTCTTATAGGCGCATTTGAAAAACCTCCGGCGATGCCGGAGGATATTTATTTGTctg < 1:3686759/150‑4 CCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTctg < 1:1652051/150‑4 CCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTAC > 1:3134972/1‑150 CTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACT > 1:881192/1‑150 ATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGAATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTctgtag > 1:681854/1‑144 cttacggcccgtaaACGGGCTGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCG > 1:2492071/15‑150 CGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTctgtagaaa < 1:1555255/150‑10 CGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTctgtagaaa < 1:408308/150‑10 CGGGCAGCCCGTTTACGGGCCGTAAGTAACAAAGTTGGATGCAAATGTCAGATCGTGTGCGCATGTTCGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGTAGGATATTTATTTGTctgtagaaa > 1:4031847/1‑141 AGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGAC > 1:2389123/1‑150 GCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCGGCTCGTGTGCGCCTGTTCGGGCGCGGCTGGTAAGAGAGTCTTATAGGCGCAGTTGAAAAACCTACGGCTATGCAGGAGGATATTTATTTGTTcgtagagaagtagg > 1:3852322/1‑136 GCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACT > 1:2003676/1‑150 CGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTT > 1:2827710/1‑150 CGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTT > 1:2496995/1‑150 CGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGC > 1:208871/1‑150 GTAACGAAGTTGGATGCAAATGTCAGATCGTGTGTGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTT < 1:3426364/150‑1 ACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTT < 1:1501098/150‑1 CGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTC < 1:4196055/150‑1 GTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCT > 1:2899990/1‑150 gtgggtatAAATGTCAGATCGTGTGCGCCTTTTAGGGCGCGGCTGGGAAGAGAGCCTTATAGGCGTATTTGAAACACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTG < 1:2246438/142‑1 TTGGATGCAAACGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTGTCTCGCAGTGCGCGTTTTTCCTCTG < 1:1138871/150‑1 GATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGC < 1:54038/150‑1 CAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAG > 1:4211844/1‑150 CAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAG > 1:3239168/1‑150 GTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTCTGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAG > 1:3994711/1‑150 TCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCCCGCAGTGCGCGTTTTTCCTCTGCGCTGAG‑AAAGCC > 1:733892/1‑150 GTGCGCCTGTTATGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAG < 1:4001608/150‑1 TGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGA < 1:2140300/150‑1 GCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGAC > 1:3059191/1‑150 TTCCCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAACGAAGTTGGATGCAAATGTCAGATCGTGTGCGCCTGTTAGGGCGCGGCTGGTAAGAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_168/97‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCTGCGCTGAGGAAAGCCATTTCCAGAC > Xen14_21/25‑144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |