| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_145 | 1 = | 0 (0.000) | 51 (0.170) | 31/210 | 0.3 | 100% | intergenic (–/–) | –/– | –/– |
| ? | Xen14_32 | = 55348 | 0 (0.000) | intergenic (+261/–) | Xen14_03070/– | hypothetical protein/– | |||||
GCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_145/113‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagatgctgcatttgcatagtgcaatctccccttacttatccGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCACACT < Xen14_32/55348‑55244 GCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGA > 1:3538829/1‑150 CTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAG < 1:3038933/150‑1 CTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAG < 1:883621/150‑1 CTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAG < 1:2985243/150‑1 CTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAG < 1:2335836/150‑1 ATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAA > 1:2426499/1‑150 ATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAA > 1:2426498/1‑150 TGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGC > 1:235644/1‑150 TGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTAGCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGC > 1:235640/1‑150 TGAAAGCCTCAACACATAATCGGCCGTTTGGTAGTACTTCGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGC > 1:2601673/1‑150 GAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCT < 1:573973/150‑1 AAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGC > 1:2928886/1‑145 CCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGT > 1:9831/1‑150 CCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCAGGAGGCAATTGCAATATCTCTGTGAACTTAAACAGGAGAAAGGCTATGAAACGCTCTGGT > 1:2243486/1‑150 CTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTG < 1:1355657/150‑1 CTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTG < 1:1355654/150‑1 TCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCGGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGG < 1:1834868/150‑1 CGCATAATCGGCCGTTTGGTAGTACTTATGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTG < 1:1254685/150‑1 CGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTG < 1:1743688/150‑1 ATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGNGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCT < 1:3893910/150‑1 TCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGATATGAAGCGCTCTGGTGGTGTGTCTGCTC > 1:3200679/1‑150 GGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCAT > 1:3607623/1‑150 GGCCGTTTGGTAGTACTGATGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCAT < 1:3967655/150‑1 CCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTA < 1:3075870/150‑1 GTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATC > 1:2825487/1‑150 TTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACGGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCT > 1:3123527/1‑150 TTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACGGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCT > 1:3027860/1‑150 TTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTG > 1:4079287/1‑150 TGGTGGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGC < 1:423252/150‑1 TAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAACTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATT < 1:3503781/150‑1 GTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTAC < 1:628378/150‑1 GTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTAC < 1:628389/150‑1 GTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTAC < 1:628387/150‑1 GTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTAC < 1:628383/150‑1 GTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTAC < 1:628379/150‑1 ACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGA > 1:3196658/1‑150 GGATAGCCAACCATTAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTG < 1:1077960/150‑1 GGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTG < 1:1077952/150‑1 GGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTG < 1:1077953/150‑1 GGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTG < 1:1077959/150‑1 GGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTG < 1:1077958/150‑1 TAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACA > 1:3558413/1‑150 AGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACAT < 1:1063117/150‑1 AGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACAT < 1:1063116/150‑1 GCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATT > 1:3774598/1‑150 GCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCCGCATTACGATTCTGACATT < 1:3136267/150‑1 CAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCA < 1:2682189/150‑1 CAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCACTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCA > 1:2025869/1‑150 AACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCAC < 1:1436220/150‑1 AACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCAC < 1:963596/150‑1 CATCAGATGCTGCATTTGCATAGTGCAGTCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCACACT < 1:3237641/150‑1 GCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_145/113‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagatgctgcatttgcatagtgcaatctccccttacttatccGGAGGCAATTGCAATATCTCTGTGAACTTACACAGGAGAAAGGCTATGAAGCGCTCTGGTGGTGTGTCTGCTCATTATCTGCATTACGATTCTGACATTCACACT < Xen14_32/55348‑55244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |