| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_138 | = 1361 | 0 (0.000) | 58 (0.080) | 35/204 | 1.8 | 100% | intergenic (‑134/–) | scrY_2/– | Sucrose porin/– |
| ? | Xen14_141 | 47 = | 0 (0.000) | coding (24/1002 nt) | Xen14_04755 | hypothetical protein | |||||
AGCGGCATCATTCATCAGTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_138/1213‑1361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttatggtcacttttgagacagttatggaaattaaaatcctgcacaaGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAACGTTATTTGCA > Xen14_141/47‑118 AGCGGCATCATTCATCAGTTGTCACGAACGGTGCAATAGTGATCCACACCCAACACCTGAAATCAGCCCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCAACTTTGCGACAGTTATGGAAATTAAAATCCTGCACAAG > 1:811430/1‑150 GCATCATTCATCAGTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGG > 1:4026824/1‑150 CATCATTCATCAGTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGG > 1:3859666/1‑150 ATCATTCATCAGTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGA < 1:1306435/150‑1 TCATTCATCAGTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCA‑TTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAAT < 1:2158785/150‑1 TTCATCAGTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGA > 1:1512300/1‑150 CATCAGTTGTCACGAACAGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTACTCTCCTGATTCAGGAGAGCCTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGc < 1:3504818/150‑2 GTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAATAGCCGGGC > 1:1078521/1‑150 GTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTACACAAGCAGGGAATGAGTAGCCGGGC < 1:2579559/150‑1 TCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCG < 1:4102971/150‑1 TCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTGTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCG > 1:2350608/1‑150 CACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGA > 1:2104572/1‑150 CACGAACGGTGCAATAGTGATCCACACCCAACGCATGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGA > 1:2948510/1‑150 CGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATT > 1:770218/1‑150 CGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGA < 1:866831/132‑1 GGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAG > 1:1607718/1‑150 GTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGA > 1:3967606/1‑150 TGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGTCAGAG < 1:1984530/150‑1 TGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAG < 1:2376444/150‑1 GCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGA < 1:2964210/150‑1 AGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGG > 1:3523712/1‑150 GTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGCGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCAGGGCGATTGCCAGAGAACTGGG > 1:4132259/1‑150 GTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGG > 1:2712973/1‑150 GTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGG > 1:2712974/1‑150 GTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGA < 1:4222092/134‑1 GTGATCCACACCCAACGCATGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGG > 1:3397904/1‑150 TGATCCACACCCAGTGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGG < 1:1102140/150‑1 TGATCCACACCCAATGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGG < 1:1896143/150‑1 TGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGAGTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGG < 1:3051685/150‑1 TGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTACTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGG < 1:4015337/150‑1 GATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGA > 1:4032087/1‑150 GATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGA > 1:438297/1‑150 TCCACACCCAACGCCTGAGATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATC > 1:362470/1‑150 TCCACACCCAACACCTGAGATCCGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGGCAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGAGGATC > 1:362467/1‑150 CACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCC < 1:1363580/150‑1 ACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGGTTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCG < 1:1003163/150‑1 CCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGC > 1:2802254/1‑150 CGCCGGAAATCAGATCCAAGGGGTAATCGGCTCTCCTGATTCAGGAGAGCTTATGTTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGG < 1:3946741/136‑1 CTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGT > 1:575178/1‑150 CTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGT > 1:2745948/1‑150 TGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGGGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTT > 1:2715563/1‑150 TGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTT > 1:1323608/1‑150 TGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTT > 1:1323606/1‑150 ATCAGATCCAAGGGGTACTCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGTCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAAC > 1:2230346/1‑150 ATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGGGAACTGGGGATCTCCCGCAATACGGTTAAAC > 1:2103617/1‑150 ATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAAC < 1:584374/150‑1 ATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAAC < 1:585397/150‑1 ATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAAC > 1:3578113/1‑150 ATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAAC > 1:4127083/1‑150 ATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAAC > 1:1889631/1‑150 ATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAAC > 1:2103612/1‑150 ATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAAGTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAAC < 1:584375/150‑1 TCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAACG < 1:2440712/150‑1 GATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAACGTTA > 1:1055671/1‑150 CCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCAGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAACGTTATTT > 1:3839192/1‑150 CAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAACGTTATTTG < 1:2361193/150‑1 AAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAACGTTATTTGC < 1:1357864/150‑1 AGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAACGTTATTTGCA > 1:3129953/1‑150 AGCGGCATCATTCATCAGTTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAAGGGGTAATCTGCTCTCCTGATTCAGGAGAGCTTATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_138/1213‑1361‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttatggtcacttttgagacagttatggaaattaaaatcctgcacaaGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACTGGGGATCTCCCGCAATACGGTTAAACGTTATTTGCA > Xen14_141/47‑118 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |