| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_138 | 1232 = | 121 (0.860) | 43 (0.030) | 32/296 | 1.9 | 2.9% | intergenic (‑5/–) | scrY_2/– | Sucrose porin/– |
| ? | Xen14_166 | 103 = | 2762 (1.110) | intergenic (–/–) | –/– | –/– | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
‑‑‑‑‑‑TTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCTTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_138/1361‑1232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCTTCGTGGTGCGTGCAGCACAG > Xen14_166/103‑247 ccctgcTTGTGCAGGATTTTGATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGG < 1:1646033/144‑1ccctgcTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGG < 1:1534614/144‑1 ctgcTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAG < 1:232206/146‑1 gcTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCG < 1:1883668/148‑1 TTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCA < 1:1257718/150‑1 TTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGG < 1:1324122/150‑1 TTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGG < 1:1324124/150‑1 TTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGG > 1:3333942/1‑150 TCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGG < 1:3964532/150‑1 CATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAG > 1:366515/1‑150 GTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGA < 1:2734127/150‑1 TCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTCGGATGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAAC > 1:1222586/1‑150 AAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGG < 1:3632568/150‑1 AAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAACAGGCTTCGGAGCGCATGGCCGAACGGCTGGTGGAGATACAGAAACGGGT > 1:122463/1‑150 AGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTA < 1:902423/150‑1 AGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTA < 1:902422/150‑1 TACCCCATGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCAT > 1:1296888/1‑150 TGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGC > 1:1874907/1‑150 GATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCAT > 1:3296358/1‑150 GATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCAT > 1:3296359/1‑150 ATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATT > 1:1861508/1‑150 ATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATT > 1:3297097/1‑150 ATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATT > 1:1861510/1‑150 ATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATT > 1:1861509/1‑150 ATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATT < 1:3873154/150‑1 TGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATA > 1:175966/1‑150 TTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAG < 1:1563192/150‑1 TTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGT > 1:4116749/1‑150 CAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCA > 1:72508/1‑150 CAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCA > 1:72507/1‑150 CAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGAACGGGACGCGGATATCTGGCATTACCCGCATTCTAAAatcc > 1:3814373/1‑146 AGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAG > 1:2356418/1‑150 CGTTGGGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCA > 1:2857433/1‑150 GGTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGC > 1:1315857/1‑150 GTGTGGATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACCGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCA < 1:347357/150‑1 GATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCT > 1:771719/1‑150 GATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCT < 1:1232196/150‑1 ATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGttacaccaggttgcg > 1:2413927/1‑135 ATCACTATTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCTT > 1:2528389/1‑150 TTGCACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCTTCGTGGTG < 1:1373184/150‑1 ACCGTTCGTGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGCTACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGCTATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCTTCGTGGTGCGTG > 1:1135210/1‑150 TGACAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATGCAGAAACGGGTAATCACTTTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCTTCGTGGTGCGTGCAGCACAG < 1:626980/150‑1 tAGCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGATCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCTTCGTGGTGCGTGC > 1:3871141/2‑140 ‑‑‑‑‑‑TTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAGCTCTCCTGAATCAGGAGAGCAGATTACCCCTTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_138/1361‑1232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGCAGGCTTCGGAGCGCATGGCCGAACGGCTGGGGGAGATACAGAAACGGGTAATCACTGTCTGTGACCGGGAAGCGGATATCTGGCATTACCTGCATTATAAAGTCAGCCACGGGCAGCGCTTCGTGGTGCGTGCAGCACAG > Xen14_166/103‑247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |