| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_134 | = 695 | 89 (0.840) | 34 (0.260) | 19/296 | 2.9 | 27.6% | intergenic (–/+152) | –/Xen14_04742 | –/tRNA‑Arg(tct) |
| ? | Xen14_162 | 691 = | NA (NA) | coding (388/390 nt) | Xen14_04771 | hypothetical protein | |||||
GAGTACAGAACAAAACTGTCAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCTCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_134/553‑695‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATG‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_162/691‑765 GAGTACAGAACAAAACTGTAAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTG < 1:1193746/150‑1 CAAAACTGTAAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAA > 1:4065412/1‑150 CTGTAAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGG < 1:3829243/150‑1 CTGTAAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGG < 1:1633681/150‑1 tgtaAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGC < 1:436443/146‑1 tgtaAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGC > 1:2836609/5‑150 gtaAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTAGCACACTGAATCTGGCC > 1:644188/4‑150 AAACGGCTGAAGGCCTTTACTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACC > 1:1764914/1‑150 AACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCT < 1:1053904/150‑1 CGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGA < 1:270287/150‑1 GCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAAC < 1:3079140/150‑1 AAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAG < 1:4031657/150‑1 catgGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGA < 1:3947229/146‑1 ATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAA > 1:1048726/1‑150 TTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTGCCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAAC < 1:427841/150‑1 TGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACA < 1:3488678/150‑1 TATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACAC < 1:4181285/150‑1 AATACGCTGCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTAATATGCTCACCTCAGAACAACACAGGTGC < 1:369309/150‑1 GCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGa > 1:2513357/1‑149 GCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGa > 1:2513355/1‑149 GCCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGa > 1:2513354/1‑149 CCTAAGGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaa > 1:2430211/1‑148 GGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaag > 1:1869660/1‑143 GGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaaa < 1:988699/150‑8 GGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaaa < 1:2717761/150‑8 GGATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACATGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAAT > 1:3261960/1‑142 ATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaaaga < 1:1409331/150‑10 ATGAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATG > 1:416324/1‑141 GAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaaagaaa < 1:620387/150‑12 GAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaaagaaa < 1:620388/150‑12 GAAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaaagaaa < 1:1345455/150‑12 AAACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaaagaaat > 1:3201672/1‑138 AACACCCCGACGCCCCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGaaaaaaagaaatt > 1:2497125/1‑137 ATATTCACTCTACCCACACCATATGAATGATAAATATTTAATTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATGa < 1:3802127/118‑2 GAGTACAGAACAAAACTGTCAAACGGCTGAAGGCCTTTGCTCGTGCTGCATTGACTATATCAATACGCTGCCTAAGGATGAAACACCCCGACGCCTCATCAATATTCACTCTACCCACACCATATGAATGATAAATATTTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_134/553‑695‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATG‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_162/691‑765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |