| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_121 | 1 = | 0 (0.000) | 61 (0.130) | 39/236 | 0.8 | 100% | intergenic (–/+117) | –/Xen14_04715 | –/hypothetical protein |
| ? | Xen14_184 | = 443 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AAGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_121/146‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtttatgaaacattcatttgaagtaaaaCTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTCA < Xen14_184/443‑370 AAGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTG < 1:595841/150‑1 AGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGC > 1:2057126/1‑150 GGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCC < 1:2329038/150‑1 GGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTA > 1:3001459/1‑150 GACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAA > 1:3023640/1‑150 GACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAA < 1:445697/150‑1 ACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAA < 1:39855/150‑1 CATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAAT < 1:3461276/150‑1 ATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATC > 1:1860111/1‑150 TGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGCCGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATAAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCA > 1:3240539/1‑150 TGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCA > 1:3511690/1‑150 GGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCAT > 1:619130/1‑150 GGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCAT > 1:619123/1‑150 CCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCT > 1:4262237/1‑150 CCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCT > 1:942602/1‑150 GCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGG > 1:1389354/1‑150 cagcggctCGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGC > 1:4681/9‑150 cagcggctCGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGC > 1:1587890/9‑150 ATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTGCAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTG < 1:3541889/150‑1 TTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGG > 1:1960690/1‑150 AAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTC > 1:2792847/1‑150 GCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGC < 1:1246310/150‑1 TCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGG < 1:2877750/150‑1 ATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATT > 1:971415/1‑150 GGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTC > 1:3639331/1‑150 CACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACG < 1:1260401/150‑1 ACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGG < 1:43974/150‑1 ACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGG < 1:3687577/150‑1 ACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGG < 1:3567714/150‑1 CAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGC < 1:3322943/150‑1 CAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGC > 1:2443778/1‑150 gccgGATGCGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAA > 1:200736/5‑150 gccgGATGCGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAA > 1:200739/5‑150 CTGATGCGACACTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAA > 1:3678582/1‑146 TGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTC > 1:3932379/1‑150 TGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTCTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTC > 1:3130101/1‑150 TGCGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTT < 1:3652103/150‑1 TGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTT < 1:1268186/150‑1 TGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTT < 1:1268189/150‑1 TGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAAC > 1:1733572/1‑145 CGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCA < 1:79503/150‑1 CGACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCA < 1:79498/150‑1 CGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCA < 1:2508164/150‑1 CGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCA > 1:3368915/1‑150 GACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAA < 1:2925093/150‑1 GACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAA < 1:751444/150‑1 GACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAA > 1:3735898/1‑150 GACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAAC < 1:3627295/142‑1 ACGCTTGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAAC < 1:559838/150‑1 TAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTC < 1:1962002/150‑1 tGCTGCACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT > 1:791475/2‑150 tGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAGATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT < 1:361683/149‑1 tGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT > 1:2152946/2‑150 tGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT > 1:791477/2‑150 AGCTGAACTGCACCCCAAATGTTGGACATAATCTAACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT < 1:4131155/150‑1 GCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC < 1:339203/150‑1 GCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC > 1:4243663/1‑150 GCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC > 1:492905/1‑150 CTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTCA > 1:1982828/1‑150 CTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCAGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTCA > 1:2049073/1‑150 CTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCAGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTCA > 1:2049074/1‑150 AAGGCCGCGGACATGGACACCGCCATTAAACGCATCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_121/146‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtttatgaaacattcatttgaagtaaaaCTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTCA < Xen14_184/443‑370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |