| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_118 | 1 = | 0 (0.000) | 39 (0.090) | 28/234 | 0.6 | 100% | intergenic (–/+257) | –/cbpM | –/Chaperone modulatory protein CbpM |
| ? | Xen14_184 | = 442 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
GCCTGATGCGACGCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_118/149‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtttatgaaacattcatttgaagtaaaacTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC < Xen14_184/442‑371 GCCTGATGCGACGCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACT > 1:2872444/1‑150 GACGCTTTACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGT > 1:1965764/1‑150 GCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAGGTAAAACTTGCCGCTGTAAA > 1:3428729/1‑150 GCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAGGTAAAACTTGCCGCTGTAAA > 1:3183927/1‑150 GCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAA > 1:1879508/1‑150 CTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAAT > 1:3384849/1‑150 AACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCAT < 1:1680013/150‑1 CGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTA > 1:1416756/1‑150 ATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCT > 1:3752971/1‑150 TCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTATAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTG < 1:831183/150‑1 CAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGT < 1:2382646/150‑1 AGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTC > 1:3023802/1‑150 GCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCAT > 1:2769595/1‑150 GCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCAT > 1:2769594/1‑150 GCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCAT > 1:2769593/1‑150 CCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGC > 1:1173018/1‑150 CCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGC > 1:1173017/1‑150 CAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGG > 1:2968365/1‑150 CAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGG > 1:2968364/1‑150 AAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGC < 1:3194791/150‑1 AAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCA < 1:947266/150‑1 ACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTT < 1:1572926/150‑1 CTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCGTCATTTC > 1:2077918/1‑150 TGTTCCCGTAGGCCGGATAAGGCATTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCT > 1:618428/1‑150 TGTTCCCGTAGGCCGGATAAGGCATTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCT > 1:618425/1‑150 TTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTAC < 1:1818323/150‑1 TCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACG > 1:1314585/1‑150 CCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGG < 1:1752700/136‑1 CCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGC > 1:2903791/1‑150 GGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTTGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAAC < 1:3185821/150‑1 GGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAAC > 1:1458820/1‑150 gagAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTT < 1:2252638/147‑1 GATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTT < 1:1738204/150‑1 GATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTT > 1:4188026/1‑150 GATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGCTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTT < 1:2252641/150‑1 TTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGGAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT < 1:2481725/150‑1 TTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT < 1:537906/150‑1 TTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCT < 1:2481726/150‑1 TCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAACTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC < 1:2335298/150‑1 GCCTGATGCGACGCTTAACGCATCTTATCAGGCCCACAAAAAGCACTGTTCCCGTAGGCCGGATAAGGCGTTCTGAACTGCACCCCAAATGTTGGACATAATCTGACATCTGAAGGTACAGTTTATGAAACATTCATTTGAAGTAAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_118/149‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagtttatgaaacattcatttgaagtaaaacTTGCCGCTGTAAATCATTACCTGGCTGGTCATGCAGGCATCATTTCTACGGCAAAACTCTTTCAACTTTCTC < Xen14_184/442‑371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |