New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_115 = 77NA (NA)73 (0.570) 35/296 2.4 51.8% intergenic (–/‑777) –/Xen14_04695 –/hypothetical protein
?Xen14_43 = 39557 68 (0.640)intergenic (‑21/+364) yhdJ_2/Xen14_03575 DNA adenine methyltransferase YhdJ/hypothetical protein

‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGTTCAGACATCAGGATATGGCTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_115/1‑77
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGTAAGAGAAGGAGTTTTGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTCCGTGACCGTTCCGGGCGCACCATC  <  Xen14_43/39557‑39411
                                                                                                                                                                                                                                              
tcatgtgggatggcTGGTTCGGACTTCAGGATATGGTTGAGGGTTACCTGGTGATTAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTAT                                                                                          <  1:3667828/136‑1
   tgtgggatggcTGGTTCAGACTTCAGGATATGGTTGAGGGTTAACTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGC                                                                                       >  1:3928303/12‑150
    gtgggatggcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTAGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCC                                                                                      >  1:4252918/11‑150
      gggatggcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCG                                                                                    >  1:3457767/9‑150
         atggcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTTATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTAT                                                                                 <  1:235297/145‑1
            gcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCC                                                                              >  1:720787/3‑150
             cTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTA                                                                                                          <  1:2034563/120‑1
              TGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTG                                                                            <  1:4163951/150‑1
               GGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCGGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGA                                                                           >  1:3494878/1‑150
               GGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGA                                                                           >  1:1027410/1‑150
                GTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGGTCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGAT                                                                          >  1:3134688/1‑150
                GTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGAT                                                                          <  1:331541/150‑1
                GTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGAT                                                                          <  1:331542/150‑1
                 TTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATTAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTATCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                         >  1:1979263/1‑150
                 TTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                         >  1:1032260/1‑150
                 TTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTATCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTCTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                         >  1:2446554/1‑150
                  TCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAA                                                                        >  1:3686301/1‑150
                      actTCAGGATATGGTTGGGGGCTACCTGGTGATGAAGTCTTTTGATCAGGAGAGCTGATCAAGAGACGGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCC                                                                    <  1:1523416/147‑1
                       ctTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCA                                                                   >  1:1852396/3‑150
                       ctTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCA                                                                   >  1:2273153/3‑150
                         TCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGAAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATT                                                                 >  1:761268/1‑150
                            GGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGAT                                                              >  1:3450542/1‑150
                                      GAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCA                                                    <  1:511868/150‑1
                                        GGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGGCAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACC                                                  >  1:1288167/1‑150
                                        GGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACC                                                  >  1:2853863/1‑150
                                        GGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACC                                                  >  1:999876/1‑150
                                        GGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACC                                                  >  1:2212515/1‑150
                                         GGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCG                                                 >  1:1231447/1‑150
                                            TACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCAACC                                              >  1:351111/1‑150
                                               CTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGC                                           >  1:1536978/1‑150
                                                tgaTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCC                                          >  1:1634787/4‑150
                                                TGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATATCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCC                                          >  1:221580/1‑150
                                                     ATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGATCCGCCGTACC                                     <  1:2722374/150‑1
                                                         AGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTACCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGT                                 >  1:4035552/1‑150
                                                          GTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTC                                <  1:2732357/150‑1
                                                            CTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGG                              <  1:2372377/150‑1
                                                            CTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGG                              <  1:2372376/150‑1
                                                              CTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCG                                                 <  1:308412/129‑1
                                                               TTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTT                           <  1:1911763/150‑1
                                                                tgatcagatctcCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTt                          >  1:2791027/13‑149
                                                                TGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTt                          >  1:17568/1‑149
                                                                TGATCAGGAGATCTGATCAAGAGACAGCAGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTt                          <  1:1873140/150‑2
                                                                 GATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtc                         >  1:805641/1‑148
                                                                  ATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCTTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtcg                        >  1:2436791/1‑147
                                                                  ATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtcg                        >  1:1564355/1‑147
                                                                  ATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtcg                        >  1:1564359/1‑147
                                                                  ATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtcg                        >  1:1564363/1‑147
                                                                  ATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtcg                        >  1:1564354/1‑147
                                                                  ATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCATTTTGTCCTCGGTAGCTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtcg                        >  1:1888256/1‑147
                                                                    CAGGAGCTCTGCTCAAGAGACAGCTGTCAGAGAAGGAGTTTGGTATGTCACGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCAGCCGCACCTCGTCGGTTTTCGTG                      >  1:3618386/1‑150
                                                                    CAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTG                      <  1:398161/150‑1
                                                                    CAGGAGATCTGATCAAGAAACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTG                      <  1:3782912/150‑1
                                                                     AGGAGATCTGATCAAGAGACAGCTGTANGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGA                     <  1:3850133/150‑1
                                                                     AGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCGTCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGA                     >  1:3519458/1‑150
                                                                      GGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTACGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGAC                    >  1:2314435/1‑150
                                                                         GATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtcg                        >  1:3995989/1‑140
                                                                          ATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAANTGCATCGATGTTATGGCCCGTATCCCTGATAACGTCATTGATTTCATCCTCACCGNCCCCCCGTACCTCGTCGGTTTTCGTGACCGTc                <  1:3720298/150‑2
                                                                          ATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAANTGCATCGATGTTATGGCCCGTATCCCTGATAACGTCATTGATTTCATCCTCACCGNCCCCCCGTACCTCGTCGGTTTTCGTGACCGTc                <  1:3720299/150‑2
                                                                          ATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAANTGCATCGATGTTATGGCCCGTATCCCTGATAACGTCATTGATTTCATCCTCACCGNCCCCCCGTACCTCGTCGGTTTTCGTGACCGTc                <  1:3720301/150‑2
                                                                            CTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcag              >  1:1227574/1‑147
                                                                            CTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcag              >  1:2927555/1‑147
                                                                            CTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcag              >  1:977698/1‑147
                                                                            CTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcag              >  1:977701/1‑147
                                                                            CTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTAGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcag              >  1:2935905/1‑147
                                                                              GATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTGACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggg            <  1:1161811/150‑6
                                                                               ATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcagggg           >  1:2137630/1‑144
                                                                                TCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCACGTATCCCTGATAACGCCATTGATTTCATCCTCACCGATCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggggc          >  1:2862267/1‑143
                                                                                  AAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggggcgt        <  1:2201512/150‑10
                                                                                    GAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggggcgtac      <  1:4045568/150‑12
                                                                                    GAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggggcgtac      <  1:4045566/150‑12
                                                                                    GAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggggcgtac      >  1:2349232/1‑139
                                                                                     AGACAGCTGTAAGAGAANGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCCTCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggggcgtacc     >  1:2218898/1‑138
                                                                                        CAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCGTCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggggcgtaccatt  >  1:3815160/1‑135
                                                                                                                                                                                                                                              
‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGGTTCAGACATCAGGATATGGCTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_115/1‑77
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGTAAGAGAAGGAGTTTTGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTCCGTGACCGTTCCGGGCGCACCATC  <  Xen14_43/39557‑39411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.