| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_41 | 1 = | 0 (0.000) | 53 (0.890) | 28/162 | 1.0 | 100% | noncoding (1/76 nt) | Xen14_03432 | tRNA‑Arg(acg) |
| ? | Xen14_76 | = 12864 | 0 (0.000) | intergenic (+63/–) | Xen14_04356/– | tRNA‑Arg(acg)/– | |||||
AAGAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_41/149‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGA < Xen14_76/12864‑12785 AAGAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGC > 1:301263/1‑150AAGAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGC > 1:301261/1‑150 AAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCG > 1:1181767/1‑150 AATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGG > 1:3578030/1‑150 ATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGag > 1:833466/1‑148 AGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAGTATGGTGCATCCGGGAAGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAa < 1:392188/150‑2 AGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGATCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAa < 1:1090614/150‑2 ATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAGATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTCCGGCTGCATCGGGAAAATTTAT > 1:3640966/1‑150 ATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTAT < 1:3611203/150‑1 ATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTAT < 1:3743164/150‑1 TGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATT < 1:8828/150‑1 TGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATT < 1:281077/150‑1 TAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTAC < 1:1910288/150‑1 AAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACT < 1:545739/150‑1 AAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTa < 1:52150/150‑2 AAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTa < 1:52151/150‑2 GTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGAT < 1:460223/150‑1 GTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGAT < 1:1605708/150‑1 TTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATA < 1:1107806/150‑1 TTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATA < 1:1107804/150‑1 ATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATT < 1:508276/150‑1 TTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTG > 1:3664076/1‑150 TTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTG > 1:3578787/1‑150 TAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGAT < 1:2323849/150‑1 TGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCt < 1:2403248/150‑2 AGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCATAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCtac < 1:964368/150‑4 TTTTGAAGGAAATTTTTTGGAGGATATGGTGCATCCGGGAGGANTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑T < 1:3740795/113‑1 TTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGC < 1:34147/150‑1 TTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGC < 1:56256/150‑1 TTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGC < 1:3279350/150‑1 TTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTCACTACTGATATTGATATCGCTACTAAAGC > 1:3273692/1‑150 TTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCC < 1:288959/150‑1 TTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCC < 1:288966/150‑1 TTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCC < 1:288975/150‑1 TTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCC < 1:288967/150‑1 TGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCAT > 1:1323985/1‑150 AGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATC < 1:400313/150‑1 GAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAgt < 1:3928281/105‑3 AATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGT < 1:4160515/150‑1 AATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGT < 1:4160516/150‑1 ATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTA > 1:1369186/1‑150 tatcaagtaagagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAG > 1:2036354/14‑150 tcaagtaagagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAG < 1:725965/139‑1 TTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCC > 1:2680001/1‑137 gtaggagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCACGTAAGAGATGG > 1:3998124/8‑150 gtaggagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACCGCTGACATTGATACCGCCACTACAGCCATATCAAGTAAGAGATGG > 1:3012360/8‑150 gagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCCACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCA > 1:2297779/4‑150 gATGGTGCACCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATC > 1:3467512/2‑150 TGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCG > 1:2166185/1‑150 TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGG < 1:3113765/150‑1 TGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGA < 1:4144889/100‑1 GCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTACAGCCATATCAAATAAGAGATGGTGCATCCGGGAG > 1:900586/1‑150 ATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGCTATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGA > 1:3304730/1‑150 AAGAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_41/149‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGA < Xen14_76/12864‑12785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |