Predicted mutation
evidence seq id position mutation annotation gene description
RA Xen14_38 48,371 G→T A155A (GCC→GCA)  Xen14_03355 ← IS21 family transposase IS100kyp

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*Xen14_3848,3710GT86.6% 2394.1 / inf 1023A155A (GCC→GCA) Xen14_03355IS21 family transposase IS100kyp
Reads supporting (aligned to +/- strand):  ref base G (66/71);  new base T (465/421);  total (531/492)
Fisher's exact test for biased strand distribution p-value = 3.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 1023 total aligned reads displayed.

ACGACCCAATATTGATCCACCGTTTTACTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTATTTCATC  >  Xen14_38/48224‑48517
                                                                                                                                                   |                                                                                                                                                  
aCGACCCAATATTGATCCACCGTTTTACTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGc                                                                                                                                                  <  1:3315117/150‑1 (MQ=255)
            tGATCCACCGTTTTACTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGc                                                                                                                                      <  1:656772/150‑1 (MQ=255)
                  aCCGTTTTACTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGt                                                                                                                                >  1:293152/1‑150 (MQ=255)
                          aCTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATATGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATccc                                                                                                                        >  1:3291172/1‑150 (MQ=255)
                          aCTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATccc                                                                                                                        >  1:3534092/1‑150 (MQ=255)
                           cTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCa                                                                                                                       >  1:2626318/1‑150 (MQ=255)
                           cTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCa                                                                                                                       >  1:926730/1‑150 (MQ=255)
                                      cTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACg                                                                                                            >  1:1289455/1‑150 (MQ=255)
                                                              gTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGACAAATTGGATGTCAGGATCATTg                                                                                    >  1:3046829/1‑150 (MQ=255)
                                                                                        ccTTTGATTTGAACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATg                                                          <  1:3730993/150‑1 (MQ=2)
                                                                                         cTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGACAAATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGa                                                         <  1:589708/150‑1 (MQ=255)
                                                                                         cTTTGATTTGAACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGTTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGa                                                         >  1:3089113/1‑150 (MQ=11)
                                                                                         cTTTGATTTGAACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGa                                                         <  1:3238838/150‑1 (MQ=9)
                                                                                           ttgatttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGAcc                                                       <  1:2075235/150‑1 (MQ=255)
                                                                                            tgatttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATTATTGCGTTCTTTTCGTAACGTTTAGCAATGACCt                                                      >  1:3853480/1‑150 (MQ=11)
                                                                                             gatttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGTATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTg                                                     >  1:3683738/1‑150 (MQ=11)
                                                                                             gatttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTg                                                     >  1:1878139/1‑150 (MQ=255)
                                                                                              atttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGTGCTCTTTTCGTAACGTTTAGCAATGACCTgg                                                    >  1:1992803/1‑150 (MQ=11)
                                                                                              atttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTgg                                                    >  1:216383/1‑150 (MQ=255)
                                                                                              atttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTgg                                                    >  1:2514398/1‑150 (MQ=255)
                                                                                              atttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTgg                                                    >  1:1593303/1‑150 (MQ=255)
                                                                                              atttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTgg                                                    >  1:94982/1‑150 (MQ=255)
                                                                                              atttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTgg                                                    >  1:1119362/1‑150 (MQ=255)
                                                                                               tttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGga                                                   >  1:3119395/1‑150 (MQ=11)
                                                                                               tttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGga                                                   >  1:2288370/1‑150 (MQ=255)
                                                                                               tttgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGga                                                   >  1:3575527/1‑150 (MQ=255)
                                                                                               tntgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGga                                                   >  1:4219727/1‑150 (MQ=255)
                                                                                                 tgaATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGACAAATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGgaag                                                 <  1:1458993/150‑1 (MQ=255)
                                                                                                 tgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGgaag                                                 <  1:704320/150‑1 (MQ=255)
                                                                                                 tgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGgaag                                                 <  1:2550253/150‑1 (MQ=255)
                                                                                                 tgaACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGgaag                                                 <  1:841138/150‑1 (MQ=255)
                                                                                                  gaacgACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCCCTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGgaaga                                                >  1:2210874/5‑150 (MQ=11)
                                                                                                  gaacgACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGgaaga                                                >  1:418846/5‑150 (MQ=255)
                                                                                                  gaacgACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGgaaga                                                >  1:1919033/5‑150 (MQ=255)
                                                                                                   aacgACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGTACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGgaagaa                                               >  1:2121337/4‑150 (MQ=14)
                                                                                                    acgACATGTGAGTGATGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAAc                                              <  1:444544/148‑1 (MQ=255)
                                                                                                     cgACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGGAAGAACa                                             >  1:1064650/2‑150 (MQ=255)
                                                                                                     cgACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACa                                             <  1:3420784/149‑1 (MQ=255)
                                                                                                     cgACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACa                                             <  1:3612713/149‑1 (MQ=255)
                                                                                                     cgACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACa                                             <  1:1812720/149‑1 (MQ=255)
                                                                                                      gACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAg                                            <  1:500360/150‑1 (MQ=255)
                                                                                                      gACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAg                                            <  1:2799613/150‑1 (MQ=255)
                                                                                                        cATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGATCTGGAAGAACAGtt                                          <  1:1158366/150‑1 (MQ=255)
                                                                                                         aTGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGttt                                         >  1:883855/1‑150 (MQ=255)
                                                                                                           gtgAGTGGTGTAGGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTGGATCCCACTGCCCGAACGGCAGAGTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAgggttg                                       <  1:3465539/150‑6 (MQ=14)
                                                                                                           gtgAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTg                                       <  1:4034954/150‑1 (MQ=255)
                                                                                                           gtgAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTg                                       >  1:1740596/1‑150 (MQ=255)
                                                                                                           gtgAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTg                                       <  1:3880793/150‑1 (MQ=255)
                                                                                                           gtgAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTg                                       >  1:1425739/1‑150 (MQ=255)
                                                                                                           gtgAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTg                                       <  1:763007/150‑1 (MQ=255)
                                                                                                           gtgAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTCCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTg                                       >  1:4281037/1‑150 (MQ=255)
                                                                                                            tgAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGc                                      >  1:204924/1‑150 (MQ=255)
                                                                                                            tgAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGACAAATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGGAAGTACAGCTTTGc                                      <  1:3496182/150‑1 (MQ=17)
                                                                                                             gAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGct                                     <  1:3786965/150‑1 (MQ=255)
                                                                                                              agtggtgtAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGctt                                    <  1:1688190/146‑1 (MQ=255)
                                                                                                                 ggtgtAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGcttctt                                 >  1:558063/2‑150 (MQ=255)
                                                                                                                 ggtgtAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGACCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGcttctt                                 >  1:234659/2‑150 (MQ=255)
                                                                                                                 ggtgtAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAAATTGGATGTCAGGATCATTGCGCTCTTCTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGcttctt                                 >  1:1342144/2‑150 (MQ=255)
                                                                                                                  gtgtAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGTGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGGAAGAACAGCTTTGCttcttc                                >  1:2657368/1‑150 (MQ=17)
                                                                                                                   tgtAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTcc                               <  1:1392292/150‑1 (MQ=255)
                                                                                                                   tgtAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTcc                               <  1:397359/150‑1 (MQ=255)
                                                                                                                   tgtAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTcc                               <  1:3144424/150‑1 (MQ=255)
                                                                                                                     tAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCctg                             <  1:3650897/150‑1 (MQ=255)
                                                                                                                      aaGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGGAAGAACAGCTTTGCTTCTTCctga                            >  1:1976496/1‑150 (MQ=255)
                                                                                                                      aaGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCctga                            <  1:2484913/150‑1 (MQ=255)
                                                                                                                       aGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCctgac                           <  1:4091852/150‑1 (MQ=255)
                                                                                                                        gATACGGTCCAGCATCGCTGAGGTCAATGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCctgact                          >  1:3199600/1‑150 (MQ=255)
                                                                                                                         aTACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCGCTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTCAGCAATGACCTGGACGAACAGTTTTGCTTCCTCctgactg                         >  1:4362453/1‑150 (MQ=17)
                                                                                                                         aTACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCctgactg                         >  1:467783/1‑150 (MQ=255)
                                                                                                                         aTACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCctgactg                         <  1:1840257/150‑1 (MQ=255)
                                                                                                                         aTACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCctgactg                         >  1:2020111/1‑150 (MQ=255)
                                                                                                                          tACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTa                                                                <  1:2758747/110‑1 (MQ=17)
                                                                                                                          tACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCctgactga                        >  1:3913366/1‑150 (MQ=255)
                                                                                                                            cGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAAc                      >  1:383238/1‑150 (MQ=255)
                                                                                                                            cGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAAc                      >  1:1527511/1‑150 (MQ=255)
                                                                                                                             ggTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACg                     <  1:1252192/150‑1 (MQ=255)
                                                                                                                              gTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACgg                    >  1:3941437/1‑150 (MQ=255)
                                                                                                                              gTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACgg                    <  1:826480/150‑1 (MQ=255)
                                                                                                                               tCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGc                   <  1:2441261/150‑1 (MQ=255)
                                                                                                                                ccAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCa                  <  1:1950763/150‑1 (MQ=255)
                                                                                                                                ccAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCa                  >  1:161932/1‑150 (MQ=255)
                                                                                                                                ccAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCa                  >  1:1666116/1‑150 (MQ=255)
                                                                                                                                 cAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAg                 >  1:2266088/1‑150 (MQ=255)
                                                                                                                                  aGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCCCTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTCCCTAACTGAACGGCaaa                >  1:2700694/1‑148 (MQ=18)
                                                                                                                                   gCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCCTTGCGCTCTTTTCGTACCGTTTAGCACTGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGAt               >  1:1003723/1‑150 (MQ=18)
                                                                                                                                     aTCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAg             <  1:3356041/150‑1 (MQ=255)
                                                                                                                                     aTCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAg             >  1:1312974/1‑150 (MQ=255)
                                                                                                                                      tCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGc            >  1:3017801/1‑150 (MQ=255)
                                                                                                                                       cGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAAAGGCAGATAGcc           <  1:2727341/150‑1 (MQ=255)
                                                                                                                                        gCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGACAAATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGGAAGTACAGCTTTGCTTCTTCCTGACTGAACGGCAGATAGCCt          >  1:2846643/1‑150 (MQ=21)
                                                                                                                                         cTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTa         <  1:2879289/150‑1 (MQ=255)
                                                                                                                                         cTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTa         <  1:2978734/150‑1 (MQ=255)
                                                                                                                                         cTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTa         <  1:1779972/150‑1 (MQ=255)
                                                                                                                                          tGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTAt        >  1:611855/1‑150 (MQ=255)
                                                                                                                                          tGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTAt        <  1:4126950/150‑1 (MQ=255)
                                                                                                                                           gAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGGAAGAACAGCTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTAtt       <  1:2383255/150‑1 (MQ=255)
                                                                                                                                             ggTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTATTtc     <  1:1112885/150‑1 (MQ=255)
                                                                                                                                               tCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGGAAGAACAGCTTTGCTTCTTCCTGACTGAACGGCAg                 <  1:1207181/136‑1 (MQ=255)
                                                                                                                                               tCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTATTtcat   <  1:3397492/150‑1 (MQ=255)
                                                                                                                                               tCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAAATAGCCTATTtcat   <  1:529397/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
ACGACCCAATATTGATCCACCGTTTTACTCAGGATTAGCTTCTGCTATAAACTTGGCCTTTCGTTTCTATCTGAGTCGATAGCTTTCTCCTTTGATTTGAATGACATGTGAGTAGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGGGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCAATGACCTGGAAGAACAGTTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTATTTCATC  >  Xen14_38/48224‑48517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑