| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_17 | 79,624 | 0 | T | G | 76.1% | 932.6 / inf | 1109 | S216R (AGC→CGC) | Xen14_02064 | IS4 family transposase ISEc13 |
| Reads supporting (aligned to +/- strand): ref base T (147/118); new base G (510/332); total (658/451) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1115 total aligned reads displayed.
ACGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTATTTTCTCACAG > Xen14_17/79478‑79772 | cccccatctttgaccTGTCTCTTGATCAGATCTCCTGATCCAGAGACTTCCTCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACACCACTACCCAACCGGGGATGCTTGTGTGTTTGCTGTCATGCCATCGcc > 1:2514269/15‑150 (MQ=17) cccatctttgaccTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGcccc > 1:3443934/13‑150 (MQ=255) cccatctttgaccTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCAAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGcccc > 1:776079/13‑150 (MQ=17) ttGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCaaac < 1:1324497/150‑4 (MQ=255) gATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAg > 1:526431/1‑150 (MQ=255) cAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCACCAGTTTAGCCAGTTTCAAACAGGca > 1:2714603/1‑149 (MQ=255) aGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATCTCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAAACAGGccc > 1:4081229/1‑150 (MQ=255) gATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCa > 1:103706/1‑150 (MQ=255) gATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACACAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAACTTAGTCAGTTTCAAACAGGCCCa > 1:1698779/1‑150 (MQ=17) ctcCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCAttt > 1:2393269/1‑150 (MQ=255) tcCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTc > 1:1231533/1‑150 (MQ=255) tGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCACCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAgg > 1:3063744/1‑149 (MQ=255) cAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGAGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCg > 1:2012610/1‑150 (MQ=17) agagACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggt > 1:555974/1‑149 (MQ=255) atatCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCTGGGCTGCTGGTGCGTTTGCTGTCATGTCGTCGCCCCAGTTTAGCTAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGc < 1:3725977/150‑1 (MQ=9) cTGAAGTCTGAACCGGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:3592075/1‑150 (MQ=1) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCTATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:212593/1‑150 (MQ=255) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:964515/1‑150 (MQ=1) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:1667894/1‑150 (MQ=1) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc > 1:2368687/4‑150 (MQ=11) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc > 1:2922954/4‑150 (MQ=11) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc < 1:2961636/147‑1 (MQ=11) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc > 1:3966147/4‑150 (MQ=11) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc < 1:1773050/147‑1 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc > 1:3312819/1‑147 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca < 1:2782107/150‑1 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:1005026/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCACCCCAATTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:2187862/1‑150 (MQ=11) tCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACag > 1:4006276/1‑150 (MQ=11) tCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACag > 1:579673/1‑150 (MQ=11) tCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACag > 1:2264329/1‑150 (MQ=17) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGTTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:1509012/150‑2 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:1422723/150‑2 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:4261190/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:1261600/150‑2 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:3356169/150‑2 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:1973803/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCACCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATATGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:3521612/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGATGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:1111353/150‑2 (MQ=11) cTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACagt > 1:2162081/1‑150 (MQ=18) tGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagca > 1:2044710/1‑148 (MQ=11) gaatcAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag > 1:4373265/5‑147 (MQ=11) gAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTTCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACagtag < 1:4463676/150‑1 (MQ=18) aaCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAAGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcagt > 1:3791765/1‑150 (MQ=11) aaCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAAACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcagt > 1:1898570/1‑150 (MQ=11) aCCAGCCATCCCACATGCCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGAAAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTTCTTCCAGCTTAACACACAGCAGtt > 1:4120551/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt < 1:2066858/150‑1 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:3155985/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt < 1:733082/150‑1 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCACCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:2991704/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGACGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACTGGCCCATTTCCGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCATCTTAACCCACAGCAGtt > 1:2810976/1‑150 (MQ=11) ccatccctCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGttt < 1:3859810/143‑1 (MQ=14) cAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTc > 1:3032052/1‑150 (MQ=14) cAGCCATCCCACATGACTACCCAACCAGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTc > 1:210744/1‑150 (MQ=14) cAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTc < 1:2327811/150‑1 (MQ=18) cAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTc < 1:616085/150‑1 (MQ=18) aGCCATCCCACATGACTACCCAACCGGTGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:1586277/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCGTTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:694041/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc > 1:369346/1‑150 (MQ=14) aGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTcc < 1:1542218/150‑1 (MQ=18) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCa > 1:2745396/1‑150 (MQ=14) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCAAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCa > 1:257708/1‑150 (MQ=14) gCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCa < 1:3826372/150‑1 (MQ=18) ccATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAc < 1:1845532/150‑1 (MQ=14) ccATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct < 1:3649140/150‑1 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTGTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct < 1:4047493/150‑1 (MQ=14) cATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCAct < 1:2857653/150‑1 (MQ=18) aTCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActct > 1:262201/1‑150 (MQ=14) tCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActct < 1:4182452/150‑1 (MQ=14) cccACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTg > 1:4149302/1‑150 (MQ=21) ccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGt < 1:909364/150‑1 (MQ=14) cacaTTACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:66353/1‑150 (MQ=17) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCGTGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:3238884/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGGAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:1953282/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:1455401/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:2651460/1‑150 (MQ=14) acaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg < 1:825282/150‑1 (MQ=17) acaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg < 1:162666/150‑1 (MQ=17) catgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCgg < 1:241604/146‑1 (MQ=17) atgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCATAGCAGTTTCCACTCTGTCGGc < 1:244754/147‑1 (MQ=14) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGTGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg > 1:319280/3‑150 (MQ=17) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg > 1:392974/3‑150 (MQ=17) tgaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCg < 1:2680329/148‑1 (MQ=17) taCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTTTCGGCCTCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCCGTTTCCACTCTGTCGGCGt > 1:3118629/2‑150 (MQ=17) gaCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGt > 1:1741763/2‑150 (MQ=17) aCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTc < 1:374506/150‑1 (MQ=17) tACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAg < 1:874718/150‑1 (MQ=17) tACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCATCAg > 1:1181542/1‑150 (MQ=17) aCCCAACCGGGGCGACCGGTGCGTTTGTTGTTATGCCGTCTCACTGGTTTCGCCAGTTTCAGACGGGTCAATTTCAGTGTCGGCATCTGTGATGGAAGCGGTTTTCCTTCCAGTTTAACTCATAGTAGTTTCCACTCTGTTGGCGTCAGt > 1:3550589/1‑150 (MQ=9) aCCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGt > 1:3377284/1‑150 (MQ=18) aCCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCATCAGt > 1:3411123/1‑150 (MQ=17) aCCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTCCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGt > 1:28950/1‑150 (MQ=17) cccAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:1352397/1‑150 (MQ=255) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGtg > 1:1387780/1‑149 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:181704/1‑150 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:221704/1‑150 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:464512/1‑150 (MQ=18) cccAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCGGCGTCAGTa > 1:3894658/1‑150 (MQ=18) cAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTAtt < 1:497095/150‑1 (MQ=25) aCCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTAtttt > 1:3495475/1‑150 (MQ=25) | ACGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGCGTCAGTATTTTCTCACAG > Xen14_17/79478‑79772 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |