| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_17 | 79,607 | 0 | A | G | 73.2% | 516.5 / inf | 817 | V221V (GTT→GTC) | Xen14_02064 | IS4 family transposase ISEc13 |
| Reads supporting (aligned to +/- strand): ref base A (118/100); new base G (360/235); total (482/335) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 821 total aligned reads displayed.
TTTCAGAGGTAGTCATGATGACGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGC > Xen14_17/79458‑79754 | tttCAGAGGTAGTCATGATGACGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGAGCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTTAACCAGCCACCCCACATa > 1:1183543/1‑150 (MQ=255) aGTCATGATGACGCTGATTATTCCGCGAAAGGATGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAAc < 1:3655454/150‑1 (MQ=255) ttattCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAACCATATCCTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGgcgaccggtgcgt < 1:3174215/150‑12 (MQ=11) ccccatctttgaccTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGcca > 1:4063228/14‑149 (MQ=255) cccatctttgaccTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCAAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGcccc > 1:776079/13‑150 (MQ=17) gaccTGTCTCTTGATCAGATCTCCTGATCAAGAGAATTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCCCATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGcc > 1:3915980/4‑150 (MQ=17) tctcTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTc > 1:72308/1‑150 (MQ=255) ttGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATTCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCaaac < 1:2583779/150‑4 (MQ=255) ttGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCaaac < 1:1324497/150‑4 (MQ=255) gATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCa > 1:103702/1‑150 (MQ=255) tcCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTc > 1:1231533/1‑150 (MQ=255) tGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAgg < 1:1483522/150‑2 (MQ=255) tGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCACCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAgg > 1:3063744/1‑149 (MQ=255) gATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAggg > 1:1763866/1‑148 (MQ=255) cAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCg > 1:2605795/1‑150 (MQ=255) agaCCTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCAATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGTTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAAACAGGCCCACTTAAGGGTCggtgt > 1:3498898/1‑147 (MQ=17) cTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTCGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttg < 1:204306/150‑7 (MQ=17) tcatcaCCATGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcg > 1:2823156/1‑142 (MQ=17) caCCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCCGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcgccgg > 1:2772633/1‑138 (MQ=17) caCCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcgccgg > 1:2117936/1‑138 (MQ=17) cAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCggtgtttgcgccggaag < 1:3033022/150‑16 (MQ=17) tatCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCt < 1:1587870/150‑1 (MQ=17) tatCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTCGCGCCGGAAGCTGCTTTCCTTCCAGCt < 1:2733722/150‑1 (MQ=17) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc < 1:3244575/150‑1 (MQ=255) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc < 1:2411257/150‑1 (MQ=1) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:1097381/1‑150 (MQ=1) cTGAAGTCTGAACCAGCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAcc > 1:2095629/1‑150 (MQ=11) tgaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAcc < 1:3971374/146‑1 (MQ=11) tGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAg < 1:4085381/143‑1 (MQ=17) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc < 1:674122/147‑1 (MQ=11) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc > 1:2713467/4‑150 (MQ=11) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc > 1:2368686/4‑150 (MQ=11) gaagTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAccc < 1:2971266/147‑1 (MQ=11) aagTCTGAACCAGCCATCCCACATGACTACCCAGCCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcac < 1:2661851/148‑1 (MQ=11) agTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGTTTAACCcac < 1:3848769/149‑1 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:2519274/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:3291783/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca < 1:500196/150‑1 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:2793451/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:2300942/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:3725574/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCcaca > 1:1005026/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCAAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTACCCcaca > 1:3554039/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACag > 1:3389022/1‑150 (MQ=11) gTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCcaca < 1:2172625/150‑1 (MQ=17) gTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCcaca > 1:2063220/1‑150 (MQ=17) tCTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACag > 1:2380717/1‑150 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGTTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:1509012/150‑2 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCTGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:2462997/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:3110973/150‑2 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:1422723/150‑2 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc < 1:4381460/150‑2 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:3875725/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:1973800/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCACCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATATGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagc > 1:3521612/1‑149 (MQ=11) cTGAACCAGCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCACTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagca > 1:925567/1‑148 (MQ=11) tGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagca > 1:2632414/1‑148 (MQ=11) tGAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAACcacaaca > 1:2204438/1‑147 (MQ=11) tGAACCAGCCATCCCACATAACCACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGAGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACagta > 1:1998323/1‑150 (MQ=18) gAACCAGCCATCCCACATGACTACCTAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag < 1:171174/150‑4 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACTGGAGCGACCGGTGCGTTTGCTGTCGTGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTTGACATCTGCGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagtag > 1:620298/1‑150 (MQ=14) gAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAAc > 1:1791251/1‑141 (MQ=11) gAACCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcag > 1:2255829/1‑147 (MQ=11) aaCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTaaacgaagtacgc > 1:447068/1‑139 (MQ=11) aaCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAAACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACagcagt > 1:1898570/1‑150 (MQ=11) aCCAGCCATCCCACATGCCTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGAAAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTTCTTCCAGCTTAACACACAGCAGtt > 1:4120551/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt < 1:2946777/150‑1 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:3155985/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt < 1:3344865/150‑1 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCATAACCCACAGCAGtt > 1:1380872/1‑150 (MQ=11) aCCAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTATCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGtt > 1:427027/1‑150 (MQ=11) ccAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGttt < 1:2136586/150‑1 (MQ=14) ccAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGttt < 1:882504/150‑1 (MQ=14) cAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACTCACAGCAGTTTc > 1:394164/1‑150 (MQ=11) cAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTc > 1:559538/1‑150 (MQ=14) cAGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGAAAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTc > 1:2860483/1‑150 (MQ=14) aGCCATCCCACATGACTACCCAACCGGTGCGACCTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:3743196/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCATTTTCAGACAGGCCCGTTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:4156420/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc > 1:369343/1‑150 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:463349/150‑1 (MQ=14) aGCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:1661084/150‑1 (MQ=14) aGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTcc < 1:1542218/150‑1 (MQ=18) gCCATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTcc < 1:4020158/149‑1 (MQ=14) gCCATCCCACATGACTACCCAACCGGG‑CGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAc < 1:126761/150‑1 (MQ=14) ccATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAc < 1:1847919/150‑1 (MQ=14) cATCCCACATGACTGCCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct > 1:3436107/1‑150 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct > 1:579069/1‑150 (MQ=14) cATCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCAct > 1:1143529/1‑150 (MQ=14) tCCCACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCActct > 1:3823172/1‑150 (MQ=14) cccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTg > 1:3596357/1‑150 (MQ=14) ccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACNCACAGCAGTTTCCACTCTGt > 1:3775127/1‑150 (MQ=14) ccACATGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGt > 1:1682048/1‑150 (MQ=14) cacacaACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAAc > 1:533264/1‑128 (MQ=17) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGGAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:1953282/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:1617439/1‑150 (MQ=14) cacaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTc > 1:4192163/1‑150 (MQ=14) cacaTAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTc > 1:693329/1‑150 (MQ=21) acaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg < 1:1838689/150‑1 (MQ=17) acaTGACTACCCAACCGGGGCGACCGGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGCAGTTTCCACTCTGTCg < 1:825282/150‑1 (MQ=17) aTAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTAGCCAGTTTCAAACAGGCCCATTTCAGGGTCGGTGTTTGCGCCGGAAGCTGCTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGc < 1:2903456/150‑1 (MQ=21) | TTTCAGAGGTAGTCATGATGACGCTGATTATTCCGCGAAAGGAGGCTCCCGTGTCCGGTGCTGTCTCTTGATCAGATCTCCTGATCAAGAGACTTCATCACCAGGTAACCCTCAGCCATATCCTGATGTCTGAACCAGCCATCCCACATAACTACCCAACCGGGGCTGCTTGTGCGTTTGCTGTCATGCCATCGCCCCAGTTTCGCCAGTTTCAGACAGGCCCATTTCAGTGTCGGCATCTGTGACGGAAGCGGTTTTCCTTCCAGCTTAACCCACAGTAGTTTCCACTCTGTCGGC > Xen14_17/79458‑79754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |