| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_126 | 2,066 | 0 | A | G | 79.4% | 1485.9 / inf | 859 | T94A (ACT→GCT) | Xen14_04726 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (64/113); new base G (373/308); total (438/421) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.06e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 859 total aligned reads displayed.
ATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATTTCACTC > Xen14_126/1920‑2214 | tATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTc < 1:3326785/150‑1 (MQ=255) aTTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCt < 1:64986/150‑1 (MQ=255) ttttCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTAAATTATTACCTGTGGAGATAACGCCAGATGAGCCGAAAGAACTGGTGACTGCTC‑TTACTCCGTCtt > 1:4116464/1‑150 (MQ=255) tGGCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑ct < 1:2183956/150‑2 (MQ=255) tGGCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTCCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑ct < 1:687179/150‑2 (MQ=255) ggCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑c‑‑‑‑‑c‑‑‑c < 1:2607/150‑1 (MQ=255) gCTCAGACTTTGGCAAAACGAAGGGCGCATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑Ca < 1:170427/150‑1 (MQ=255) cTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑cttcc < 1:1852478/150‑5 (MQ=255) caggctctGGCAGAACGAAGGGCGTGTTTCGCGGTGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑cttccac < 1:3877553/143‑7 (MQ=255) cAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGac < 1:2467392/150‑1 (MQ=255) aggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑cttccact < 1:4027508/144‑8 (MQ=255) aggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTACGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑cttccact < 1:743910/144‑8 (MQ=255) aCTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGactac > 1:2903359/1‑150 (MQ=255) ctctGGCAGAACGAAGGGCGTGTTTCGCGGCGGCTTCCGGTAACGACCTCTTCTNACACTGGCGTTGAATTATTACCTGTAGAAATAANGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑cttccactcag > 1:3756529/4‑140 (MQ=255) cTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGactact > 1:3725616/1‑150 (MQ=255) ctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑cttccactcagac > 1:3475099/2‑138 (MQ=255) ctGGCAGAACGAAGGGCGTGTTTCGCGGCCTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑cttccactcagac < 1:2118222/149‑13 (MQ=255) tGGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑cttccactcagacc < 1:3592303/150‑14 (MQ=255) ggCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑cttccactcagacca > 1:1091432/1‑136 (MQ=255) aaaaCGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTg < 1:3371803/150‑1 (MQ=255) aGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGCCACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTc > 1:3413466/1‑150 (MQ=255) cGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGc < 1:2517191/150‑1 (MQ=255) gTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCa < 1:2140041/150‑1 (MQ=255) gtttcgcGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcc > 1:254307‑M1/4‑119 (MQ=255) atatCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCCGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAg < 1:3509844/150‑1 (MQ=255) tCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgc < 1:1602565‑M1/150‑35 (MQ=255) ggcgTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaagg < 1:100767‑M1/150‑39 (MQ=255) tCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTGTTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCg < 1:942232/150‑1 (MQ=255) cttccggtaACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaa < 1:3555131‑M1/146‑44 (MQ=255) tttCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTc < 1:2816409/150‑1 (MQ=255) tttCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTc < 1:847048/150‑1 (MQ=255) tccggTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaatt < 1:297620‑M1/148‑46 (MQ=255) tCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCAc < 1:3240403/150‑1 (MQ=255) ggTAACGACATCTTCTGACACTGGCGTTGAATTATTCCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCANTTC‑‑‑‑‑CACTCAGACCAGAGTCAGTGCCAGTTCCTGCAAGGTGGAATTCCg > 1:2752689/1‑150 (MQ=255) tAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtc < 1:519654‑M1/150‑51 (MQ=255) cgaccacttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑CTTCCACT‑‑CAGACCAGAGTCAGTGCCAGTTCCTGCAAGGTGGAATTCCGTCACg > 1:368649/7‑150 (MQ=255) gaccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg < 1:3835543‑M1/149‑55 (MQ=255) acCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggt < 1:3156388‑M1/150‑56 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGTGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta < 1:3971735‑M1/150‑57 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta < 1:1289666‑M1/150‑57 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:1173843‑M1/1‑94 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:237696‑M1/1‑94 (MQ=255) cttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaaca > 1:801265‑M1/1‑91 (MQ=255) cttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaaca > 1:4210931‑M1/1‑91 (MQ=255) ttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacat > 1:1254135‑M1/1‑90 (MQ=255) tctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatg > 1:2304844‑M1/1‑89 (MQ=255) ctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatga > 1:447148‑M1/1‑88 (MQ=255) ctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCC‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatga > 1:1532049‑M1/1‑88 (MQ=255) ctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatga > 1:106510‑M1/1‑88 (MQ=255) tGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgac < 1:3114166‑M1/150‑64 (MQ=255) tGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgac < 1:2273896‑M1/150‑64 (MQ=255) cacTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgct > 1:3621583‑M1/1‑84 (MQ=255) acTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctg < 1:1473066‑M1/150‑68 (MQ=255) cTGGCGTTGAATTGTTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctgg > 1:4416140‑M1/1‑82 (MQ=255) ggCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTGACATGACGCTGGAAAATCCt < 1:289044/150‑1 (MQ=255) gCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaa > 1:614081‑M1/1‑79 (MQ=255) cGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccatcacggtaacatgacgctggaaaa > 1:263746‑M1/1‑78 (MQ=255) cGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaa > 1:293786‑M1/1‑78 (MQ=255) gTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCCCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCa > 1:3306060/1‑150 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:815837‑M1/150‑74 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat > 1:1579618‑M1/1‑77 (MQ=255) tGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaagatggaattccgtcacggtaacatgacgctggaaaatcc > 1:1435046‑M1/1‑75 (MQ=255) attattACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatc < 1:399506‑M1/150‑79 (MQ=255) attattACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatc < 1:2053545‑M1/150‑79 (MQ=255) attattACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatc < 1:2965303‑M1/150‑79 (MQ=255) tattaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTTGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgc < 1:2849211‑M1/150‑81 (MQ=255) tattaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgc > 1:1350736‑M1/1‑70 (MQ=255) tattaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgc > 1:1927896‑M1/1‑70 (MQ=255) tattaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgc > 1:3803088‑M1/1‑70 (MQ=255) taCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccag > 1:1394426‑M1/1‑67 (MQ=255) ccTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagag > 1:1315521‑M1/1‑65 (MQ=255) ccTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagag < 1:178511‑M1/150‑86 (MQ=255) gtagaaataacgcCGGATGTGCAGAAAGAACCTGTGGCTGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctg > 1:1687338‑M1/7‑62 (MQ=255) gtagaaataacgcCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctg > 1:2565426‑M1/7‑62 (MQ=255) gtagaaataacgcCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctg > 1:701854‑M1/7‑62 (MQ=255) gtagaaataacgcCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctg > 1:2069928‑M1/7‑62 (MQ=255) agaaataacGCCGGATGAGCAGAAAGAATCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgct > 1:572657‑M1/5‑60 (MQ=255) agaaataacGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgcc > 1:874557‑M1/5‑60 (MQ=255) gaaataaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctc > 1:4094634‑M1/4‑59 (MQ=255) gaaataaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctc > 1:3208273‑M1/4‑59 (MQ=255) aaataACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctca < 1:2354960‑M1/148‑93 (MQ=255) tAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgg < 1:2771783‑M1/150‑96 (MQ=255) aaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgg > 1:2230322‑M1/1‑54 (MQ=255) aaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccacgcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggt < 1:1662035‑M1/150‑97 (MQ=255) cGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATcc > 1:1131899/1‑150 (MQ=255) cGCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgt > 1:4197218‑M1/1‑52 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:2430469‑M1/150‑100 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:481085‑M1/150‑100 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGC‑GGTCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:4314643‑M1/150‑100 (MQ=255) gCCGCATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:3941928‑M1/150‑100 (MQ=255) ccGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttg < 1:3009867‑M1/150‑101 (MQ=255) cGGATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttga > 1:1953542‑M1/1‑49 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCA‑TTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatc > 1:3659550‑M1/1‑47 (MQ=255) agcagaaagAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgttaatccgcg > 1:2028780‑M1/5‑43 (MQ=255) gcagaaaGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagatcagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgttaatccgcga < 1:308361‑M1/147‑109 (MQ=255) gcagaaaGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctgaaaaatccatcgccagagctgctcacgatgttaatccgcga > 1:1209172‑M1/4‑42 (MQ=255) agaAAGAACCTGTGGCGGCCA‑TTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgat < 1:957747‑M1/141‑103 (MQ=255) gctC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGAttt > 1:3431005/1‑150 (MQ=255) gctC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGAttt < 1:892678/150‑1 (MQ=255) ctc‑tTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑T‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATTTc < 1:2693860/150‑1 (MQ=255) | ATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTC‑TTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATTTCACTC > Xen14_126/1920‑2214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |