New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_160 1 =0 (0.000)80 (0.500) 57/284 0.6 100% intergenic (–/‑16) –/Xen14_04770 –/hypothetical protein
?Xen14_189 = 447 0 (0.000)intergenic (–/–) –/– –/–

TTGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T  >  Xen14_189/299‑453
                                                                                                                                                    |                                                                                                                                                     
ttGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGTTATCATGCTTCTATGATAGGCCATTTATAAAAAAACAtt                                                                                                                                                      >  1:3364015/1‑150 (MQ=255)
 tGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAttt                                                                                                                                                     >  1:2522740/1‑150 (MQ=255)
 tGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAttt                                                                                                                                                     >  1:3946925/1‑150 (MQ=255)
   aGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAttttt                                                                                                                                                   >  1:4151494/1‑150 (MQ=255)
    gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                  >  1:604328/1‑150 (MQ=255)
    gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                  >  1:3798013/1‑150 (MQ=255)
    gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                  <  1:3923890/150‑1 (MQ=255)
    gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                  >  1:282540/1‑150 (MQ=255)
    gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                  >  1:4271262/1‑150 (MQ=255)
    gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTCATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                  >  1:493002/1‑150 (MQ=255)
    gTTTTCCATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTNTCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                  >  1:3695973/1‑150 (MQ=255)
      tttCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATttttttt                                                                                                                                                <  1:3077159‑M2/150‑8 (MQ=255)
      tttCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATttttttt                                                                                                                                                <  1:3426845‑M2/150‑8 (MQ=255)
         cTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCCGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGACCCTATGGGCGATTTTTATCGGTATCATGCTTCTATGCTAAGCCATTTATAAAGAAACATtttttttgag                                                                                                                                             <  1:2558881‑M2/150‑11 (MQ=255)
         cTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgag                                                                                                                                             <  1:274447‑M2/150‑11 (MQ=255)
         cTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgag                                                                                                                                             <  1:274442‑M2/150‑11 (MQ=255)
         cTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgag                                                                                                                                             <  1:274444‑M2/150‑11 (MQ=255)
             atTGAGACAGAAGATTCAGGTACCTCTTTTGGTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattg                                                                                                                                         >  1:3883691‑M2/1‑136 (MQ=255)
             atTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattg                                                                                                                                         <  1:2162139‑M2/150‑15 (MQ=255)
             atTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattg                                                                                                                                         <  1:2494438‑M2/150‑15 (MQ=255)
              ttGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATTGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgt                                                                                                                                        <  1:2902288‑M2/150‑16 (MQ=255)
              ttGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgt                                                                                                                                        >  1:1357915‑M2/1‑135 (MQ=255)
              ttGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgt                                                                                                                                        <  1:4222667‑M2/150‑16 (MQ=255)
               tGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtg                                                                                                                                       <  1:2780712‑M2/150‑17 (MQ=255)
                gagaCAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtga                                                                                                                                      <  1:2227690‑M2/150‑18 (MQ=255)
                      gaagaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattg                                                                                                                                <  1:532977‑M2/150‑24 (MQ=255)
                      gaagaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattg                                                                                                                                <  1:2579188‑M2/150‑24 (MQ=255)
                       aagaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTAATAAAAAAACATtttttttgagattgtgatgattgc                                                                                                                               >  1:2016151‑M2/1‑126 (MQ=255)
                          aTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttt                                                                                                                            >  1:4128885‑M2/1‑123 (MQ=255)
                           ttCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctttt                                                                                                                           <  1:3044431‑M2/150‑29 (MQ=255)
                           ttCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctttt                                                                                                                           <  1:3044432‑M2/150‑29 (MQ=255)
                           ttCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctttt                                                                                                                           <  1:2259417‑M2/150‑29 (MQ=255)
                           ttCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctttt                                                                                                                           <  1:2259415‑M2/150‑29 (MQ=255)
                            tCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttg                                                                                                                          >  1:3450414‑M2/1‑121 (MQ=255)
                             cAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgt                                                                                                                         <  1:2244419‑M2/150‑31 (MQ=255)
                              aGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtg                                                                                                                        >  1:3718542‑M2/1‑119 (MQ=255)
                                     tctTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctt                                                                                                                             <  1:3633270‑M2/138‑27 (MQ=255)
                                     tctTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAAAATtttttttgagattgtgatgattgcttttgtggcatatt                                                                                                                 <  1:1273282‑M2/150‑39 (MQ=255)
                                      ctTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatattt                                                                                                                <  1:2413172‑M2/150‑40 (MQ=255)
                                         ttGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttg                                                                                                             >  1:1263200‑M2/1‑108 (MQ=255)
                                          tGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttgg                                                                                                            >  1:1685602‑M2/1‑107 (MQ=255)
                                             tACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggctt                                                                                                         <  1:3632954‑M2/150‑47 (MQ=255)
                                                 gTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggctttttt                                                                                                     >  1:2671182‑M2/1‑100 (MQ=255)
                                                 gTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggctttttt                                                                                                     >  1:1489243‑M2/1‑100 (MQ=255)
                                                 gTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggctttttt                                                                                                     >  1:446708‑M2/1‑100 (MQ=255)
                                                 gTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttagctttttt                                                                                                     <  1:3910571‑M2/150‑51 (MQ=255)
                                                   cagcagCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttca                                                                                                   <  1:2000460‑M2/150‑53 (MQ=255)
                                                     gcagcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATTGGTATCATGCTTCTATGATAAGCTATTTATAAAAAAACATttgttttgagattgtgatgactgctgttgtggcatatttttggcttttttcatt                                                                                                 >  1:2528942‑M2/1‑96 (MQ=255)
                                                      cagcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcattt                                                                                                >  1:755766‑M2/1‑95 (MQ=255)
                                                       agcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttc                                                                                               >  1:2231493‑M2/1‑94 (MQ=255)
                                                       agcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttc                                                                                               >  1:2231492‑M2/1‑94 (MQ=255)
                                                             tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                         >  1:2157140‑M2/1‑88 (MQ=255)
                                                             tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                         >  1:3356256‑M2/1‑88 (MQ=255)
                                                             tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                         >  1:2157141‑M2/1‑88 (MQ=255)
                                                                     cGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattac                                                                                 <  1:2092932‑M2/150‑71 (MQ=255)
                                                                     cGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattac                                                                                 >  1:3632359‑M2/1‑80 (MQ=255)
                                                                        ttACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaa                                                                              >  1:619747‑M2/1‑77 (MQ=255)
                                                                            aaTTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccac                                                                          <  1:3448534‑M2/150‑78 (MQ=255)
                                                                                  gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagttta                                                                    >  1:3489520‑M2/1‑67 (MQ=255)
                                                                                  gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagttta                                                                    <  1:574139‑M2/150‑84 (MQ=255)
                                                                                  gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagttta                                                                    <  1:574135‑M2/150‑84 (MQ=255)
                                                                                  gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagttta                                                                    <  1:574134‑M2/150‑84 (MQ=255)
                                                                                   aTAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaa                                                                   <  1:3415522‑M2/150‑85 (MQ=255)
                                                                                   aTAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcacatttttggcctttttcatttctgacaggatattacaaaccacagtttaa                                                                   >  1:3778506‑M2/1‑66 (MQ=255)
                                                                                          cTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaa                                                            >  1:3931714‑M2/1‑59 (MQ=255)
                                                                                            tATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaa                                                               >  1:520854‑M2/1‑57 (MQ=255)
                                                                                               gggCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatga                                                       <  1:2367567‑M2/150‑97 (MQ=255)
                                                                                                ggCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaa                                                      <  1:847108‑M2/150‑98 (MQ=255)
                                                                                                 gCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaa                                                     <  1:3385564‑M2/150‑99 (MQ=255)
                                                                                                 gCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaa                                                     >  1:3480640‑M2/1‑52 (MQ=255)
                                                                                                  cGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaat                                                    <  1:3893961‑M2/150‑100 (MQ=255)
                                                                                                      ttttATCGGTATCATGCTTCTATGATCAGCCATTTATAAAAAAACATtttttttgagactgtgatgattgcttttgtggcatatttttggcttttttcatttccgacaggatattacaaaccacagtttaagaaaaaatatgaaatgatt                                                <  1:1304136‑M2/150‑104 (MQ=255)
                                                                                                         tATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaat                                             <  1:280738‑M2/150‑107 (MQ=255)
                                                                                                          aTCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttgagaaagaatatgaaatgattaatt                                            <  1:240661‑M2/150‑108 (MQ=255)
                                                                                                          aTCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaa                                                                              >  1:1800592‑M2/1‑43 (MQ=255)
                                                                                                               tATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataat                                       >  1:3988370‑M2/1‑38 (MQ=255)
                                                                                                                      cTTCTATGATACGCCATTTATAAAAAAACATtttttttgagattgtgctgcttgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgctggtt                                <  1:2582149‑M2/150‑120 (MQ=255)
                                                                                                                      cTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggtt                                <  1:1566825‑M2/150‑120 (MQ=255)
                                                                                                                       ttCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacagggtattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttg                               <  1:4164497‑M2/150‑121 (MQ=255)
                                                                                                                              aTAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattat                        <  1:575290‑M2/150‑128 (MQ=255)
                                                                                                                                aaGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaacccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgt                      <  1:236682‑M2/150‑130 (MQ=255)
                                                                                                                                  gCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtgttatgttc                    <  1:1383703‑M2/150‑132 (MQ=255)
                                                                                                                                         ataAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaggaatatgaaatgattaattataatgatggttggtattatgttcttgctcg             >  1:1660131‑M2/1‑12 (MQ=255)
                                                                                                                                         ataAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcg             >  1:1660130‑M2/1‑12 (MQ=255)
                                                                                                                                          taAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgt            <  1:3990177‑M2/150‑140 (MQ=255)
                                                                                                                                          taAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgt            <  1:1990398‑M2/150‑140 (MQ=255)
                                                                                                                                          taAAAAAACATtttttttgagattgtgataattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgt            <  1:3277323‑M2/150‑140 (MQ=255)
                                                                                                                                              aaaaCATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatg        >  1:3433585‑M2/1‑7 (MQ=255)
                                                                                                                                               aaaCATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatga       <  1:3486845‑M2/150‑145 (MQ=255)
                                                                                                                                                  cATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatgataa    <  1:2901822‑M2/150‑148 (MQ=255)
                                                                                                                                                    ttttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatgataatt  <  1:2350293‑M2/150‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TTGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T  >  Xen14_189/299‑453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.