New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_160 1 =0 (0.000)68 (0.420) 48/282 0.8 100% intergenic (–/‑16) –/Xen14_04770 –/hypothetical protein
?Xen14_189 = 446 0 (0.000)intergenic (–/–) –/– –/–

Only 100 of 160 total aligned reads displayed.

TATTGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T  >  Xen14_189/297‑453
                                                                                                                                                     |                                                                                                                                                     
tattGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACa                                                                                                                                                       <  1:1309011/150‑1 (MQ=255)
   tGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAttt                                                                                                                                                    >  1:2522740/1‑150 (MQ=255)
     aGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAttttt                                                                                                                                                  >  1:4151494/1‑150 (MQ=255)
      gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                 >  1:3798013/1‑150 (MQ=255)
      gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                 >  1:4271262/1‑150 (MQ=255)
      gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                 <  1:3923890/150‑1 (MQ=255)
      gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTCATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                                 >  1:493002/1‑150 (MQ=255)
        tttCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttg                                                                                                                                               <  1:3213765‑M2/150‑9 (MQ=255)
        tttCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATttttttt                                                                                                                                               <  1:3426845‑M2/150‑8 (MQ=255)
        tttCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATttttttt                                                                                                                                               <  1:3077159‑M2/150‑8 (MQ=255)
           cTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgaga                                                                                                                                            >  1:1977699‑M2/1‑139 (MQ=255)
           cTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgag                                                                                                                                            <  1:274444‑M2/150‑11 (MQ=255)
           cTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgag                                                                                                                                            <  1:274442‑M2/150‑11 (MQ=255)
              tatTGAGACAGAAGATTCAGGTACCTCTTTTGCTCATGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGAGATTTTTCTCGTTATCATGCTTTTATGATAAGCCCTTTATAAAAAAAAAgttttttgggattt                                                                                                                                         <  1:3859704‑M2/150‑15 (MQ=255)
               atTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattg                                                                                                                                        <  1:2162139‑M2/150‑15 (MQ=255)
                ttGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATTGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgt                                                                                                                                       <  1:2902288‑M2/150‑16 (MQ=255)
                ttGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgt                                                                                                                                       <  1:4222667‑M2/150‑16 (MQ=255)
                ttGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgt                                                                                                                                       >  1:1357915‑M2/1‑135 (MQ=255)
                 tGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtg                                                                                                                                      <  1:2780712‑M2/150‑17 (MQ=255)
                        gaagaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattg                                                                                                                               <  1:2579188‑M2/150‑24 (MQ=255)
                        gaagaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattg                                                                                                                               <  1:532977‑M2/150‑24 (MQ=255)
                         aagaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTAATAAAAAAACATtttttttgagattgtgatgattgc                                                                                                                              >  1:2016151‑M2/1‑126 (MQ=255)
                            aTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttt                                                                                                                           >  1:4128885‑M2/1‑123 (MQ=255)
                             ttCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctttt                                                                                                                          <  1:2259415‑M2/150‑29 (MQ=255)
                             ttCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctttt                                                                                                                          <  1:2259417‑M2/150‑29 (MQ=255)
                             ttCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctttt                                                                                                                          <  1:3044431‑M2/150‑29 (MQ=255)
                              tCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttg                                                                                                                         >  1:3450414‑M2/1‑121 (MQ=255)
                               catgtacCTCTTTTGCTACTGTCNGCAGCGATTGCGCTGGCGGTTACAGTTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtg                                                                                                                        >  1:3763656‑M2/4‑119 (MQ=255)
                                     ccTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatat                                                                                                                  <  1:168097‑M2/150‑38 (MQ=255)
                                       tctTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAAAATtttttttgagattgtgatgattgcttttgtggcatatt                                                                                                                <  1:1273282‑M2/150‑39 (MQ=255)
                                        ctTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatattt                                                                                                               <  1:2413172‑M2/150‑40 (MQ=255)
                                         ttttGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACNtttttttgagattgtgatgattgcttttgtggcatattttt                                                                                                              <  1:3699319‑M2/150‑42 (MQ=255)
                                           ttGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttg                                                                                                            >  1:1263200‑M2/1‑108 (MQ=255)
                                            tGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttgg                                                                                                           >  1:1685602‑M2/1‑107 (MQ=255)
                                             gCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggct                                                                                                          <  1:4355187‑M2/150‑46 (MQ=255)
                                               tACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggctt                                                                                                        <  1:3632954‑M2/150‑47 (MQ=255)
                                                   gTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggctttttt                                                                                                    >  1:1489243‑M2/1‑100 (MQ=255)
                                                     cagcagCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATCAGCCATTTATAAAAAAACAtttttttgagcttgtgatgcttgcttttgtggcatatttttggcttttttcat                                                                                                  <  1:3958413‑M2/150‑54 (MQ=255)
                                                       gcagcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATTGGTATCATGCTTCTATGATAAGCTATTTATAAAAAAACATttgttttgagattgtgatgactgctgttgtggcatatttttggcttttttcatt                                                                                                >  1:2528942‑M2/1‑96 (MQ=255)
                                                         agcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttc                                                                                              >  1:2231492‑M2/1‑94 (MQ=255)
                                                         agcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttc                                                                                              >  1:2231493‑M2/1‑94 (MQ=255)
                                                          gcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctg                                                                                             >  1:200692‑M2/1‑92 (MQ=255)
                                                            gATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgac                                                                                           >  1:1008465‑M2/1‑90 (MQ=255)
                                                            gATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgac                                                                                           >  1:691991‑M2/1‑90 (MQ=255)
                                                               tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacagg                                                                                        >  1:1744949‑M2/1‑87 (MQ=255)
                                                               tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                        >  1:2157140‑M2/1‑88 (MQ=255)
                                                               tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                        >  1:3356256‑M2/1‑88 (MQ=255)
                                                                       cGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattac                                                                                >  1:3632359‑M2/1‑80 (MQ=255)
                                                                        ggTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaa                                                                               <  1:2705465‑M2/150‑73 (MQ=255)
                                                                        ggTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaa                                                                               <  1:2705464‑M2/150‑73 (MQ=255)
                                                                          ttACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaa                                                                             >  1:619747‑M2/1‑77 (MQ=255)
                                                                                    gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaa                                                                   <  1:3649868‑M2/150‑85 (MQ=255)
                                                                                    gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagttta                                                                   >  1:3489520‑M2/1‑67 (MQ=255)
                                                                                    gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagttta                                                                   <  1:574135‑M2/150‑84 (MQ=255)
                                                                                    gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagttta                                                                   <  1:574134‑M2/150‑84 (MQ=255)
                                                                                     aTAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaag                                                                  <  1:2558102‑M2/150‑86 (MQ=255)
                                                                                     aTAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaag                                                                  >  1:3842654‑M2/1‑65 (MQ=255)
                                                                                     aTAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaag                                                                  >  1:3842653‑M2/1‑65 (MQ=255)
                                                                                     aTAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcacatttttggcctttttcatttctgacaggatattacaaaccacagtttaa                                                                  >  1:3778506‑M2/1‑66 (MQ=255)
                                                                                       aaGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaa                                                                >  1:754037‑M2/1‑63 (MQ=255)
                                                                                        aGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcctatttttggcttttttcatttctgacaggatattacaaaccacggtttaagaaa                                                               <  1:4402575‑M2/150‑89 (MQ=255)
                                                                                        aGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaa                                                               <  1:3725263‑M2/150‑89 (MQ=255)
                                                                                         gATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaag                                                              <  1:4079084‑M2/150‑90 (MQ=255)
                                                                                          aTCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaaga                                                             <  1:3646337‑M2/150‑91 (MQ=255)
                                                                                            cTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaa                                                           >  1:3931714‑M2/1‑59 (MQ=255)
                                                                                              tATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaag                                                              >  1:2993883‑M2/1‑56 (MQ=255)
                                                                                              tATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcctttttcatttctgacaggatattacaaaccacagtttaagaaag                                                              >  1:3864883‑M2/1‑56 (MQ=255)
                                                                                                  ggCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaa                                                     <  1:847108‑M2/150‑98 (MQ=255)
                                                                                                   gCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaat                                                    >  1:3127245‑M2/1‑51 (MQ=255)
                                                                                                   gCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaa                                                    >  1:3480640‑M2/1‑52 (MQ=255)
                                                                                                   gCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaa                                                    <  1:3385564‑M2/150‑99 (MQ=255)
                                                                                                    cGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatg                                                   <  1:1199717‑M2/150‑101 (MQ=255)
                                                                                                    cGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaat                                                   <  1:3893961‑M2/150‑100 (MQ=255)
                                                                                                           tATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaat                                            <  1:280738‑M2/150‑107 (MQ=255)
                                                                                                            aTCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttgagaaagaatatgaaatgattaatt                                           <  1:240661‑M2/150‑108 (MQ=255)
                                                                                                            aTCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaa                                                                             >  1:1800592‑M2/1‑43 (MQ=255)
                                                                                                             tCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattataaaccacagtttaagaaagaatatgaaatgattaattat                                          <  1:3983659‑M2/150‑110 (MQ=255)
                                                                                                                 tATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataat                                      >  1:3988370‑M2/1‑38 (MQ=255)
                                                                                                                    cATGCTTCTATGATAAGCCATTTATAAANAAANAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcattnctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatg                                   <  1:3753802‑M2/150‑117 (MQ=255)
                                                                                                                        cTTCTATGATACGCCATTTATAAAAAAACATtttttttgagattgtgctgcttgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgctggtt                               <  1:2582149‑M2/150‑120 (MQ=255)
                                                                                                                         ttCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacagggtattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttg                              <  1:4164497‑M2/150‑121 (MQ=255)
                                                                                                                            tATGATAAGCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtat                           >  1:274274‑M2/1‑26 (MQ=255)
                                                                                                                                aTAAGCCATTTATAAAAAAACAtttttttgagattgcgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatg                       >  1:56759‑M2/1‑22 (MQ=255)
                                                                                                                                aTAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattat                       <  1:575290‑M2/150‑128 (MQ=255)
                                                                                                                                  aaGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaacccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgt                     <  1:236682‑M2/150‑130 (MQ=255)
                                                                                                                                    gCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttct                   <  1:1315345‑M2/150‑133 (MQ=255)
                                                                                                                                    gCCATTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttct                   <  1:1315344‑M2/150‑133 (MQ=255)
                                                                                                                                    gCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtgttatgttc                   <  1:1383703‑M2/150‑132 (MQ=255)
                                                                                                                                       aTTTATAAAAAAACAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgc                >  1:3998018‑M2/1‑15 (MQ=255)
                                                                                                                                           ataAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaggaatatgaaatgattaattataatgatggttggtattatgttcttgctcg            >  1:1660131‑M2/1‑12 (MQ=255)
                                                                                                                                           ataAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcg            >  1:1660130‑M2/1‑12 (MQ=255)
                                                                                                                                            taAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgt           <  1:1990398‑M2/150‑140 (MQ=255)
                                                                                                                                            taAAAAAACATtttttttgagattgtgataattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgt           <  1:3277323‑M2/150‑140 (MQ=255)
                                                                                                                                             aaaaaaaCAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcacttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgtta          <  1:609997‑M2/150‑142 (MQ=255)
                                                                                                                                              aaaaaaCAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttat         <  1:2805019‑M2/150‑143 (MQ=255)
                                                                                                                                                aaaaCAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatga       <  1:1790217‑M2/150‑145 (MQ=255)
                                                                                                                                                aaaaCATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatg       >  1:3433585‑M2/1‑7 (MQ=255)
                                                                                                                                                    cAtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataacgatggttggtattatgttcttgctcgttatgataat   <  1:2145235‑M2/150‑149 (MQ=255)
                                                                                                                                                    cATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatgataa   <  1:2901822‑M2/150‑148 (MQ=255)
                                                                                                                                                     atttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatgataatt  <  1:1858667‑M2/150‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TATTGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T  >  Xen14_189/297‑453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.