New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_38 15257 =116 (0.940)51 (0.480) 40/268 2.1 41.8% intergenic (‑104/‑373) xerC_4/Xen14_03318 Tyrosine recombinase XerC/hypothetical protein
?Xen14_63 = 19808 37 (0.360)intergenic (+293/–) Xen14_04181/– hypothetical protein/–

Only 100 of 105 total aligned reads displayed.

TTGCAGCGTGGTGGAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_63/19659‑19884
                                                                                                                                                     |                                                                                                                                                    
ttGCAGCGTGGTGGAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCt                                                                                                                                                      >  1:681776/1‑150 (MQ=255)
ttGCAGCGTGGTGGAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCt                                                                                                                                                      >  1:2007871/1‑150 (MQ=255)
   cAGCGTGGTGGAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTgg                                                                                                                                                   <  1:2608965/150‑1 (MQ=255)
   cAGCGTGGTGGAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTgg                                                                                                                                                   <  1:2551170/150‑1 (MQ=255)
     gCGTGGTGGAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGtt                                                                                                                                                 >  1:2448195/1‑150 (MQ=255)
        tggtggAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                              <  1:1489618/150‑1 (MQ=255)
        tggtggAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                              <  1:3523645/150‑1 (MQ=255)
        tggtggAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTgg                                                                                                                                              <  1:1489484/150‑1 (MQ=255)
         ggtggAGGCATCCGGTGCCAGTCTGGATAAGGGGCGGCACGATCAGTTACTTACCGCACTTCGCACGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTATGCAAACGGCTCTCGAAAACCTTGGTTTggg                                                                                                                                             <  1:3496351/150‑1 (MQ=255)
         ggtggAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGGGACTTATAGCACTGCGCACGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACGGTGCAAACGGCTCTCGAAAACCTTGGTTTggg                                                                                                                                             <  1:2610134/150‑1 (MQ=255)
         ctcatgggCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCGAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTggg                                                                                                                                             <  1:1685739/144‑1 (MQ=255)
         ctcatgggCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCGAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTggg                                                                                                                                             <  1:1685736/144‑1 (MQ=255)
           tggAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGgag                                                                                                                                           <  1:1300091/150‑1 (MQ=255)
             gAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGaa                                                                                                                                         <  1:1365418/150‑1 (MQ=255)
              aGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAg                                                                                                                                        <  1:389362/150‑1 (MQ=255)
                  aTCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggc                                                                                                                                    <  1:1934760‑M2/150‑19 (MQ=255)
                   tCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCt                                                                                                                                   <  1:3997481/150‑1 (MQ=255)
                   tCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCt                                                                                                                                   <  1:3967213/150‑1 (MQ=255)
                        tGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaag                                                                                                                              <  1:3708757‑M2/150‑25 (MQ=255)
                        tGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGc                                                                                                                              >  1:640593/1‑150 (MQ=255)
                            aGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaat                                                                                                                          >  1:1452281‑M2/1‑122 (MQ=255)
                            aGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCACGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaat                                                                                                                          >  1:2883341‑M2/1‑122 (MQ=255)
                              tCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgt                                                                                                                        >  1:1147108‑M2/1‑120 (MQ=255)
                               cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGgt                                                                                                                       >  1:1123451/1‑150 (MQ=255)
                               cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGgt                                                                                                                       >  1:4467892/1‑150 (MQ=255)
                               cTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAA‑TCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtag                                                                                                                      >  1:1161044‑M2/1‑118 (MQ=255)
                                tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGgtg                                                                                                                      >  1:2921669/1‑150 (MQ=255)
                                tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGgtg                                                                                                                      <  1:1280065/150‑1 (MQ=255)
                                tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGTGCTCCAGCTATTGgtg                                                                                                                      >  1:4202532/1‑150 (MQ=255)
                                tGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCACGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGgtg                                                                                                                      <  1:3091177/150‑1 (MQ=255)
                                 ggAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagg                                                                                                                     >  1:1253436‑M2/1‑117 (MQ=255)
                                   agaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTc                                                                                                                   <  1:3391923/150‑1 (MQ=255)
                                       ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacagg                                                                                                               <  1:3586192‑M2/150‑40 (MQ=255)
                                          gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTggg                                                                                                                                             >  1:3295986/1‑117 (MQ=255)
                                              cACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTgg                                                                                                        >  1:3489092/1‑150 (MQ=255)
                                                cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGcc                                                                                                      <  1:1609113/150‑1 (MQ=255)
                                                cGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGcc                                                                                                      <  1:1609110/150‑1 (MQ=255)
                                                   ccAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagat                                                                                                   <  1:2852073‑M2/150‑52 (MQ=255)
                                                     aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCg                                                                                                 >  1:884510/1‑150 (MQ=255)
                                                     aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACATTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCg                                                                                                 >  1:884511/1‑150 (MQ=255)
                                                          cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgat                                                                                            <  1:2466445‑M2/150‑59 (MQ=255)
                                                          cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGCCCGCTGCa                                                                                            >  1:1735892/1‑150 (MQ=255)
                                                           ttacCGCACTTCGCCCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCaa                                                                                           <  1:3575838/150‑1 (MQ=255)
                                                            tacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaattagatacctgatat                                                                                          <  1:80256‑M2/150‑61 (MQ=255)
                                                              ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgg                                                                                        <  1:1883209‑M2/150‑63 (MQ=255)
                                                              ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGc                                                                                        >  1:645648/1‑150 (MQ=255)
                                                              ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGc                                                                                        >  1:2588829/1‑150 (MQ=255)
                                                              ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGc                                                                                        >  1:1910006/1‑150 (MQ=255)
                                                               cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGcc                                                                                       >  1:1897328/1‑150 (MQ=255)
                                                               cGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACATtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatggg                                                                                       <  1:2666949‑M2/150‑64 (MQ=255)
                                                                gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacagggg                                                                                                             >  1:2367649‑M2/1‑86 (MQ=255)
                                                                gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacagggg                                                                                                             >  1:858057‑M2/1‑86 (MQ=255)
                                                                 cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtg                                                                                     >  1:2680390‑M2/1‑85 (MQ=255)
                                                                 cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtg                                                                                     >  1:1380113‑M2/1‑85 (MQ=255)
                                                                 cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAg                                                                                     <  1:1573858/150‑1 (MQ=255)
                                                                 cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAg                                                                                     <  1:2656217/150‑1 (MQ=255)
                                                                   cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGAt                                                                                   >  1:1039463/1‑150 (MQ=255)
                                                                   cTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGAt                                                                                   >  1:1426763/1‑150 (MQ=255)
                                                                       gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCg                                                                               >  1:3767630/1‑150 (MQ=255)
                                                                          cgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgc                                                                            <  1:3012658‑M2/150‑75 (MQ=255)
                                                                            ctgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATc                                                                          >  1:4093039/1‑150 (MQ=255)
                                                                              gctgTTAATCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATcga                                                                        <  1:1971640/150‑3 (MQ=255)
                                                                              gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttc                                                                        <  1:2624437‑M2/150‑79 (MQ=255)
                                                                                tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATcgaaa                                                                      >  1:2966934/1‑146 (MQ=255)
                                                                                tgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTGTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATcgaaa                                                                      >  1:1363025/1‑146 (MQ=255)
                                                                                 gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACTTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATcgaang                                                                     >  1:2562170/1‑145 (MQ=255)
                                                                                 gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACTTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATcgaaag                                                                     >  1:1729801/1‑145 (MQ=255)
                                                                                 gTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaggaatgtagggacaggggcgaatcagatacctggtatgggtagcttcacgctttctgtt                                                                     <  1:811860‑M2/150‑82 (MQ=255)
                                                                                   tAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATcgaaagct                                                                   >  1:78221/1‑143 (MQ=255)
                                                                                      gCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcag                                                                <  1:3259922‑M2/150‑87 (MQ=255)
                                                                                       ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcagg                                                               >  1:3997597‑M2/1‑63 (MQ=255)
                                                                                       ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcagg                                                               <  1:696799‑M2/150‑88 (MQ=255)
                                                                                        cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATcgaaagctggtcc                                                              >  1:3368449/1‑138 (MQ=255)
                                                                                         gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATcgaaagctggtccg                                                             >  1:605461/1‑137 (MQ=255)
                                                                                                tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacagggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatat                                                      >  1:2378721‑M2/1‑54 (MQ=255)
                                                                                                   gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatca                                                   <  1:2808546‑M2/150‑100 (MQ=255)
                                                                                                      tGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaa                                                >  1:1198309‑M2/1‑48 (MQ=255)
                                                                                                      tGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaa                                                >  1:1198304‑M2/1‑48 (MQ=255)
                                                                                                        gtgatATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaat                                              >  1:3095616‑M2/3‑46 (MQ=255)
                                                                                                                 aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaagtaagggagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcag                                     >  1:3340651‑M2/1‑37 (MQ=255)
                                                                                                                       aTGGCACTGTGCAAACGGCTCTCGAAAGCCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggtttta                               <  1:2048337‑M2/150‑120 (MQ=255)
                                                                                                                        tGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttat                              >  1:723415‑M2/1‑30 (MQ=255)
                                                                                                                        tGGCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttat                              >  1:1983316‑M2/1‑30 (MQ=255)
                                                                                                                          gCACTGTGCAAACGGCTCTCGAAAACCTtgttttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattc                            >  1:4163187‑M2/1‑28 (MQ=255)
                                                                                                                          gCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattactatcaggttttattc                            >  1:590100‑M2/1‑28 (MQ=255)
                                                                                                                          gCACTGTGCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattactatcaggttttattc                            >  1:590101‑M2/1‑28 (MQ=255)
                                                                                                                          gCACTGTGCAAACGGCTCTCGAAAACCCtggtttgggagaagcggctcaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattc                            <  1:3328494‑M2/150‑123 (MQ=255)
                                                                                                                               gtgCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcag                       <  1:2773188‑M2/150‑128 (MQ=255)
                                                                                                                               gtgCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcag                       <  1:3770645‑M2/150‑128 (MQ=255)
                                                                                                                               atgcAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcag                       >  1:1872431‑M2/2‑23 (MQ=255)
                                                                                                                                 gCAAACGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcagtg                     >  1:1921512‑M2/1‑21 (MQ=255)
                                                                                                                                    aaCGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcagtgggg                  >  1:804562‑M2/1‑18 (MQ=255)
                                                                                                                                    aaCGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcagtgggg                  >  1:804565‑M2/1‑18 (MQ=255)
                                                                                                                                     aCGGCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcggatcagatacctgatatgggtagcttcacgctttctttttcaggtactggatatcaaaaattaccatcaggttttattcttcagtggggc                 >  1:2729118‑M2/1‑17 (MQ=255)
                                                                                                                                        gCTCTCGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcagtggggctca              <  1:1446463‑M2/150‑137 (MQ=255)
                                                                                                                                           ctcGAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcagtggggctcaatc           >  1:2503815‑M2/1‑11 (MQ=255)
                                                                                                                                              gAAAACCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattacgatcaggttttattcttcagtggggctcaatcggc        >  1:965059‑M2/1‑8 (MQ=255)
                                                                                                                                               aaaaCCTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcagtggggctcaatcggcg       >  1:960205‑M2/1‑7 (MQ=255)
                                                                                                                                                   ccTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatataaaaaattaccatcaggttttattcttc                         <  1:1867642‑M2/128‑126 (MQ=255)
                                                                                                                                                    cTtggtttgggagaagcggctaaaaggaatgtagggacaggggcgaatcagatacctgatatgggtagcttcacgctttctgtttcaggtactggatatcaaaaattaccatcaggttttattcttcagtggggctcaatcggcgcacca  <  1:2682059‑M2/150‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TTGCAGCGTGGTGGAGGCATCCGGTGCCAGTCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGTGCTCCAGCTATTGGTGTTCCGTTCTTCTGGCCGTCCGCTGCAATGCCAGATACCGTAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_63/19659‑19884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.