New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_20 1 =0 (0.000)66 (1.040) 45/192 0.2 100% intergenic (–/‑80) –/Xen14_02217 –/hypothetical protein
?Xen14_33 = 53189 0 (0.000)intergenic (+37/–) Xen14_03104/– ISNCY family transposase ISRor2/–

CATGAGCAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAGGCTGGCAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_33/53042‑53241
                                                                                                                                                   |                                                                                                                                                    
catgAGCAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCag                                                                                                                                                    <  1:3980057/150‑1 (MQ=255)
   gAGCAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaa                                                                                                                                                 >  1:4162822/1‑150 (MQ=255)
     gCAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaagg                                                                                                                                               <  1:4052383/150‑1 (MQ=255)
     gCAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaagg                                                                                                                                               <  1:130245/150‑1 (MQ=255)
     gCAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaagg                                                                                                                                               <  1:130246/150‑1 (MQ=255)
     gCAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaagg                                                                                                                                               <  1:130247/150‑1 (MQ=255)
      cAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaagga                                                                                                                                              <  1:3154860/150‑1 (MQ=255)
        aGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACa                                                                                                                                            <  1:458681/150‑1 (MQ=255)
         gCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACATGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACAt                                                                                                                                           >  1:554899/1‑150 (MQ=255)
                 aaTTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATtgg                                                                                                                                   <  1:4352290/150‑1 (MQ=255)
                  aTTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATtggc                                                                                                                                  <  1:1887042/150‑1 (MQ=255)
                   ttGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATtggct                                                                                                                                 <  1:2822562/150‑1 (MQ=255)
                      gcTTGCTCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATtggctggc                                                                                                                              <  1:1304887/149‑1 (MQ=255)
                      ccTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATtggctggc                                                                                                                              <  1:3905246/150‑1 (MQ=255)
                                 cTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAg                                                                                                                   <  1:3543994/150‑1 (MQ=255)
                                       cggtgCTTGGAACGTGAGATTGTCCGGGCTACAACCTAACTCACTGAGGTTGATGTTCAGAACTGTCATTAAAAGGGGAGATGAATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATtg                                                                                                                                    <  1:3325193/123‑1 (MQ=12)
                                       cAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGaa                                                                                                             <  1:3477757/150‑1 (MQ=255)
                                         gggCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAgg                                                                                                           >  1:386429/1‑150 (MQ=255)
                                          ggCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATCAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAANGTAAGATTGAAgg                                                                                                           <  1:2434796/149‑1 (MQ=255)
                                           gCTTTGAACGTGAGATTGTGCTGGCGGCAACCCCACTCACTGATGCTGATATTCCGAACTGTCATTCAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGACAGGAAGGCAAGATTGAAAGCt                                                                                                         >  1:2040546/1‑150 (MQ=25)
                                           gCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAGGCt                                                                                                         >  1:1986908/1‑150 (MQ=255)
                                           gCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAGGCt                                                                                                         >  1:2040552/1‑150 (MQ=255)
                                           gCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAGGCt                                                                                                         >  1:2040555/1‑150 (MQ=255)
                                               tGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACa                                                                                                                                            <  1:1844887/111‑1 (MQ=255)
                                                gAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGGCTATTGCTGAACGGCTACGGCAGGAAGGACATCCAATTGGCTGGCAGGAAGGTAAGATTGAAGGCTGGCaa                                                                                                    >  1:2867838/1‑150 (MQ=255)
                                                gAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAGGCTGGCaa                                                                                                    <  1:2074378/150‑1 (MQ=255)
                                                  aCGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAGGCTGGCAAGa                                                                                                  >  1:515474/1‑150 (MQ=255)
                                                  aCGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAGGCTGGCAAGa                                                                                                  >  1:1790771/1‑150 (MQ=255)
                                                   cGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGTAGAGATTTATGACTATCGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaagtaagattgaaggctggcaagaa                                                                                                 >  1:4085005‑M2/1‑97 (MQ=255)
                                                   cGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaagtaagattgaaggctggcaagaa                                                                                                 >  1:3479984‑M2/1‑97 (MQ=255)
                                                    gTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaag                                                                                                >  1:1152248‑M2/1‑96 (MQ=255)
                                                     tGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaagg                                                                                               >  1:556496‑M2/1‑95 (MQ=255)
                                                     tGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaagg                                                                                               >  1:556498‑M2/1‑95 (MQ=255)
                                                           tgtgCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaatt                                                                                         >  1:3920414‑M2/1‑89 (MQ=255)
                                                            gtgCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaatta                                                                                        <  1:710010‑M2/150‑63 (MQ=255)
                                                             tgCTGGCGGCAACCCACCTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTAAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattag                                                                                       <  1:2591159‑M2/150‑64 (MQ=255)
                                                              gCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattaga                                                                                      <  1:693299‑M2/150‑65 (MQ=255)
                                                                cttgtaccacccaactcACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaag                                                                                    >  1:114949‑M2/9‑84 (MQ=255)
                                                                   cggcAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtt                                                                                 <  1:611569‑M2/150‑70 (MQ=255)
                                                                      cAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgc                                                                              <  1:1872464‑M2/150‑73 (MQ=255)
                                                                      cAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgc                                                                              <  1:32259‑M2/150‑73 (MQ=255)
                                                                      cAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgc                                                                              <  1:3166825‑M2/150‑73 (MQ=255)
                                                                         cccAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcagg                                                                           <  1:24071‑M2/150‑76 (MQ=255)
                                                                             aCTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaag                                                                       >  1:2059016‑M2/1‑71 (MQ=255)
                                                                              cTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagc                                                                      <  1:4118600‑M2/150‑81 (MQ=255)
                                                                              cTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagc                                                                      <  1:1163634‑M2/150‑81 (MQ=255)
                                                                                  cTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgc                                                                  <  1:1057415‑M2/150‑85 (MQ=255)
                                                                                  cTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgc                                                                  <  1:3678500‑M2/150‑85 (MQ=255)
                                                                                  cTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgc                                                                  <  1:2083695‑M2/150‑85 (MQ=255)
                                                                                  cTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaagg                                                                                               >  1:1729475‑M2/1‑66 (MQ=255)
                                                                                   tGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgca                                                                 >  1:331312‑M2/1‑65 (MQ=255)
                                                                                   tGATGCTGATATTCCGAACTGTCATGAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgca                                                                 >  1:3839021‑M2/1‑65 (MQ=255)
                                                                                   acaatgggggcgcaagaactgtcattaaaagGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgca                                                                 >  1:1044169‑M2/16‑65 (MQ=255)
                                                                                   acaatgggggcgcaagaactgtcattaaaagGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgca                                                                 >  1:1044166‑M2/16‑65 (MQ=255)
                                                                                              ttCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggccggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagcca                                                      <  1:3818311‑M2/150‑97 (MQ=255)
                                                                                                ccGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCCACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccatt                                                    <  1:1797025‑M2/150‑99 (MQ=255)
                                                                                                   aaCTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaa                                                 <  1:1772173‑M2/150‑102 (MQ=255)
                                                                                                    aCTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaa                                                <  1:3151619‑M2/150‑103 (MQ=255)
                                                                                                     cTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaat                                               >  1:2862640‑M2/1‑47 (MQ=255)
                                                                                                     cTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaat                                               >  1:3423230‑M2/1‑47 (MQ=255)
                                                                                                      tggcgataaaaggAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcag                                                                            >  1:713780‑M2/7‑46 (MQ=255)
                                                                                                      tggcagtaaaaggAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcag                                                                            >  1:1582028‑M2/7‑46 (MQ=255)
                                                                                                      tGTCGTTAAAAGGGGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcag                                                                            >  1:713784‑M2/1‑46 (MQ=255)
                                                                                                      tGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaatt                                              >  1:2682586‑M2/1‑46 (MQ=255)
                                                                                                      tGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaa                                                  <  1:2646006‑M2/146‑101 (MQ=255)
                                                                                                      tGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcag                                                                            >  1:1582029‑M2/1‑46 (MQ=255)
                                                                                                       gTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatga                                                              >  1:4199689‑M2/1‑45 (MQ=255)
                                                                                                          aTTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctt                                          <  1:1273099‑M2/150‑109 (MQ=255)
                                                                                                               aaGGAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgc                                     >  1:3476811‑M2/1‑37 (MQ=255)
                                                                                                                 ggAGAGATTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcat                                   <  1:2936495‑M2/150‑116 (MQ=255)
                                                                                                                   agagaTTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaaaattgaaggctggcaagaaggtaaattagaaggttggcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgc                                 <  1:49934‑M2/150‑118 (MQ=255)
                                                                                                                    gagaTTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcataaacaagccattaaaattgctttgcgcatgct                                <  1:352565‑M2/150‑119 (MQ=255)
                                                                                                                    gagaTTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcataaacaagccattaaaattgctttgcgcatgct                                <  1:352559‑M2/150‑119 (MQ=255)
                                                                                                                     agaTTGATGATGATTGCTGAACGGCGACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattaggaggtttgcaggaaagcatgcatgaacaagccattaaaagtgctttgcgcatgcgg                               >  1:3190813‑M2/1‑31 (MQ=255)
                                                                                                                     agaTTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctg                               <  1:659021‑M2/150‑120 (MQ=255)
                                                                                                                      gaTTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctgg                              <  1:876516‑M2/150‑121 (MQ=255)
                                                                                                                       aTTGATGACTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctgga                             >  1:3800029‑M2/1‑29 (MQ=255)
                                                                                                                          gatgaCTATTGCTGAATGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaggccattaaaattgctttgtgcatgctggagca                          <  1:4167535‑M2/150‑125 (MQ=255)
                                                                                                                            tgaCTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtgtgcagggaagtatgcatgaacaagccattaaaattgctttgcgcatgctggagcagg                        >  1:3743661‑M2/1‑24 (MQ=255)
                                                                                                                             gaCTATTGCTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcaggg                       <  1:2397534‑M2/150‑128 (MQ=255)
                                                                                                                                     cTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatt               <  1:4035832‑M2/150‑136 (MQ=255)
                                                                                                                                     cTGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatc               <  1:3640064‑M2/150‑136 (MQ=255)
                                                                                                                                      tGAACGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcg              >  1:346343‑M2/1‑14 (MQ=255)
                                                                                                                                        aaCGGCTACGGCaggaaggacgtcaaattggctgacaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtg            >  1:3043666‑M2/1‑12 (MQ=255)
                                                                                                                                         aCGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtga           >  1:3729813‑M2/1‑11 (MQ=255)
                                                                                                                                          cGGCTATGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtgac          >  1:3923891‑M2/1‑10 (MQ=255)
                                                                                                                                          cGGCTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaagttaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcactgatcgtgac          >  1:3229911‑M2/1‑10 (MQ=255)
                                                                                                                                             cTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtgaccag       >  1:2035579‑M2/1‑7 (MQ=255)
                                                                                                                                             cTACGGCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtgaccag       <  1:2966526‑M2/150‑144 (MQ=255)
                                                                                                                                               aCGGCaggaaggacatcagattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtgaccaggt     <  1:2177953‑M2/150‑146 (MQ=255)
                                                                                                                                               aCGGCaggaaggacatcagattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtgaccaggt     <  1:2177952‑M2/150‑146 (MQ=255)
                                                                                                                                                cGGCaggaaggacatcaaattggctggcaggaaggtgagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtgaccag       >  1:3629094‑M2/1‑4 (MQ=255)
                                                                                                                                                 ggCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaggggagctgagaaggtttgcaggaaagcatgcatgagcaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtgaccaggtgc   >  1:486496‑M2/1‑3 (MQ=255)
                                                                                                                                                  gCaggaaggacatcaaattggctggcaggaaggtaagattgaaggctggcaagaaggtaaattagaaggtttgcaggaaagcatgcatgaacaagccattaaaattgctttgcgcatgctggagcagggcattgatcgtgaccaggtgct  <  1:3495310‑M2/150‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CATGAGCAAGCCATTAAAATTGCCTTGCGCATGCTGGAGCAGGGCTTTGAACGTGAGATTGTGCTGGCGGCAACCCAACTCACTGATGCTGATATTCCGAACTGTCATTAAAAGGAGAGATTGATGACTATTGCTGAACGGCTACGGCAGGAAGGACATCAAATTGGCTGGCAGGAAGGTAAGATTGAAGGCTGGCAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_33/53042‑53241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.