New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	Xen14_168	296 =	1849 (1.190)	112 (0.140)	57/296	0.0	5.7%	coding (223/459 nt)	Xen14_04774	IS200/IS605 family transposase IS200C
	?	Xen14_190	374 =	NA (NA)					intergenic (–/–)	–/–	–/–
Rejected: Frequency below/above cutoff threshold.

CATCGCTGGGCAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_190/225‑448                                                                                                                                                      |                                                                                         cATCGCTGGGCAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACtgt                                                                                          >  1:203391/1‑150 (MQ=255) cATCGCTGGGCAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACtgt                                                                                          >  1:2550013/1‑150 (MQ=255) cATCGCTGGGCAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACtgt                                                                                          >  1:117365/1‑150 (MQ=255) cATCGCTGGGCAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACtgt                                                                                          >  1:117369/1‑150 (MQ=255)     gCTGGGCAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAg                                                                                      >  1:117007/1‑150 (MQ=255)     gCTGGGCAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCAACACTATTCCGGAATACAGAGCCTCGAAAACAATGACGCAAATGGAGGTATAATCATGAAAGATTATCTACAAACCGTGAAg                                                                                      >  1:3306146/1‑150 (MQ=255)           cAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATGCAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGcac                                                                                <  1:1661429/150‑1 (MQ=255)                 cGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGaa                                                                          >  1:3909176/1‑150 (MQ=255)                      aTCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGTTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTgg                                                                     <  1:791894/150‑1 (MQ=255)                      aTCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTgg                                                                     <  1:2646612/150‑1 (MQ=255)                      aTCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTgg                                                                     <  1:1170144/150‑1 (MQ=255)                      aTCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTgg                                                                     <  1:2543394/150‑1 (MQ=255)                      aTCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGCTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTgg                                                                     <  1:2543393/150‑1 (MQ=255)                      aTCTGGTCACGATCATCGGAACTCTGGTTGCATTGGTCGGTGTAAGTGTCGACATTGTTCTGGAATACAGGGTCTCGAAAACAGTGAGGAAAATGGAGAGGTGATAATGAAAGATGGTCTACAAACTGTGAAGTGGTACATTGAATTTgg                                                                     <  1:4481670/150‑1 (MQ=255)                        cTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGTTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGcc                                                                   <  1:1961577/150‑1 (MQ=255)                             cACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGCTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTg                                                              <  1:2497708/150‑1 (MQ=255)                                   catcGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTGTCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACaga                                                        >  1:2385001/1‑150 (MQ=255)                                     tcGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAgg                                                      <  1:1035826/150‑1 (MQ=255)                                     tcGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAgg                                                      <  1:1035827/150‑1 (MQ=255)                                      cGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGt                                                     <  1:489399/150‑1 (MQ=255)                                      cGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGt                                                     <  1:1477405/150‑1 (MQ=255)                                       ggAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTg                                                    >  1:1566059/1‑150 (MQ=255)                                       ggAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTg                                                    >  1:1566062/1‑150 (MQ=255)                                             ctGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGc                                              <  1:3898670/150‑1 (MQ=255)                                             ctGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGc                                              >  1:303701/1‑150 (MQ=255)                                              tGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCt                                             <  1:1009439/150‑1 (MQ=255)                                                 ttGCACTGGGCGGTGCAATTGTCACCACTATTCCTGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGTTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCAc                                          <  1:3488540/150‑1 (MQ=255)                                                      cTGGTCGGTGCAATTGTCATCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAg                                     <  1:1298220/150‑1 (MQ=255)                                                       tGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGa                                    <  1:1089884/150‑1 (MQ=255)                                                        ggTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaa                                   <  1:648563/150‑1 (MQ=255)                                                         gTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGCTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaac                                  <  1:3798285/150‑1 (MQ=255)                                                         gTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAATTATAATCATGAAAGATTAGCTACAAACTGTGAATTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaac                                  <  1:4114484/150‑1 (MQ=37)                                                          tCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGATATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTAAGaaca                                 <  1:3696846/150‑1 (MQ=255)                                                            ggTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGaacaac                               <  1:2732962/150‑1 (MQ=255)                                                             gTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGTCACCTGAACAGAGGTGATATGCTCACCTCAGAacaaca                              >  1:1189339/1‑150 (MQ=255)                                                             gTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAacaaca                              >  1:2644345/1‑150 (MQ=255)                                                             gTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGCTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAacaaca                              <  1:1323063/150‑1 (MQ=255)                                                                 aaTTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAgg                          >  1:1174082/1‑150 (MQ=255)                                                                  aTTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGt                         >  1:788932/1‑150 (MQ=255)                                                                  aTTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGt                         >  1:1231006/1‑150 (MQ=255)                                                                       caccacTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCATCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTcc                    >  1:1291876/1‑150 (MQ=255)                                                                       caccacTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCATCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTcc                    >  1:1291881/1‑150 (MQ=255)                                                                       caccacTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCATCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTcc                    >  1:1291882/1‑150 (MQ=255)                                                                       caccacTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCATCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTcc                    >  1:1291884/1‑150 (MQ=255)                                                                       caccacTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTcc                    >  1:212702/1‑150 (MQ=255)                                                                       caccacTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTcc                    >  1:4103122/1‑150 (MQ=255)                                                                        accacTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGGGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCa                   >  1:1418978/1‑150 (MQ=255)                                                                           acTATTCCGGAATACAGAGCCTCGGAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATg                <  1:795287/150‑1 (MQ=255)                                                                           acTATTCCGGAATACAGAGCCTCGGAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATg                <  1:795284/150‑1 (MQ=255)                                                                           acTATTCCGGAATACAGAGCCTCGGAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATg                <  1:795286/150‑1 (MQ=255)                                                                            cTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATga               >  1:4476354/1‑149 (MQ=255)                                                                             tATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaa              >  1:2916688/1‑148 (MQ=255)                                                                              aTTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaa             >  1:3120926/1‑147 (MQ=255)                                                                               ttCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaaa            <  1:2889769/150‑5 (MQ=255)                                                                               ttCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaaa            >  1:1738913/1‑146 (MQ=255)                                                                                  cGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAAt                 >  1:122394/1‑142 (MQ=255)                                                                                  cGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAAt                 >  1:122398/1‑142 (MQ=255)                                                                                  cGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGATATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaaaaaa         <  1:3776609/150‑8 (MQ=255)                                                                                   ggAATACAGAGCCTCGAAAACAATGAAGAAAAGGGAGCGACAATCATGAAAGATCATCGACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaaaaaag        <  1:2568263/150‑9 (MQ=18)                                                                                    gAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCGACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaaaaaaga       <  1:4459081/150‑10 (MQ=255)                                                                                      aTACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaaaaaagaaa     <  1:3031614/150‑12 (MQ=255)                                                                                       tACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGACTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaaaaaagaaat    <  1:4148913/150‑13 (MQ=21)                                                                                         cAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATgaaaaaaagaaattt  >  1:1596962/1‑136 (MQ=255)                                                                                                                                                      |                                                                                         CATCGCTGGGCAATACCGTTTATCTGGTCACGATCATCGGAACTCTGTTTGCACTGGTCGGTGCAATTGTCACCACTATTCCGGAATACAGAGCCTCGAAAACAATGAAGAAAATGGAGGTATAATCATGAAAGATTATCTACAAACTGTGAAGTGGCACACTGAATTTGGCCACCTGAACAGAGGTGATATGCTCACCTCAGAACAACACAGGTGCTCCAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_190/225‑448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.