| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_168 | 1 = | 0 (0.000) | 45 (0.070) | 37/242 | 2.2 | 100% | intergenic (–/+59) | –/Xen14_04774 | –/IS200/IS605 family transposase IS200C |
| ? | Xen14_46 | = 40324 | 0 (0.000) | intergenic (‑92/–) | Xen14_03701/– | hypothetical protein/– | |||||
TAATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > Xen14_46/40178‑40351 | tAATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCAGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctc < 1:1451024/150‑1 (MQ=255) aTCAAATCCATCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTACAAGGctctc > 1:4020575/1‑150 (MQ=255) aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc > 1:1030423/1‑150 (MQ=255) aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc > 1:3369925/1‑150 (MQ=255) aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc > 1:1769859/1‑150 (MQ=255) aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc > 1:17177/1‑150 (MQ=255) aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCAATGAACCCATTTTGTATCATTACCTGTTATTTCAGTCGAAATAGTATGATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc > 1:680966/1‑150 (MQ=255) ttaaaTCCAGCCCTTCTTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTTTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctct < 1:4066797/148‑1 (MQ=255) aaTCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTAc < 1:3125586/150‑1 (MQ=255) aaTCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAAGGCGCCTATAAGGCTCTCTTAc < 1:3670696/150‑1 (MQ=255) aGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGcc > 1:3602945/1‑150 (MQ=255) aGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGcc < 1:3655146/150‑1 (MQ=255) ttCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGcc > 1:3799304/1‑150 (MQ=255) ttCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGcc < 1:3999182/150‑1 (MQ=255) cTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAg > 1:2603669/1‑150 (MQ=255) gagaGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgca > 1:3056554‑M2/1‑119 (MQ=255) gCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAg > 1:1823204/1‑127 (MQ=255) ccTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacga < 1:114484‑M2/150‑37 (MQ=255) tCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTCTAAGGctctcttaccagccgcgccctaacaggcgcacacgatc < 1:3266205‑M2/150‑39 (MQ=255) tCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatc < 1:1092092‑M2/150‑39 (MQ=255) aTTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctga > 1:1502729‑M2/1‑109 (MQ=255) ttCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTCTTATTCAATACATATCCTCCGACATAGCCGGAGGTTTTTCAAATGCGCCTACAAGGctctcttcccagccgcgccctaacaggcgcacacgatctgac < 1:2877939‑M2/150‑43 (MQ=255) cccATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatt < 1:606375‑M2/150‑46 (MQ=255) cccATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatt < 1:2932390‑M2/150‑46 (MQ=255) cccATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatt > 1:2651301‑M2/1‑105 (MQ=255) cccATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagacgcgccctaacaggcgcacacgatctgacatt < 1:4179185‑M2/150‑46 (MQ=255) ccATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacattt > 1:1562086‑M2/1‑104 (MQ=255) cATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacatgcgcacacgatctgacatttg > 1:1179292‑M2/1‑103 (MQ=255) cATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttg > 1:3617450‑M2/1‑103 (MQ=255) gAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcat > 1:1422290‑M2/1‑100 (MQ=255) gAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcat < 1:1425807‑M2/150‑51 (MQ=255) aaCCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatc < 1:277051‑M2/150‑52 (MQ=255) cccATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatcca < 1:2761662‑M2/150‑54 (MQ=255) cATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaac > 1:2058311‑M2/1‑95 (MQ=255) cATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAACGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaac < 1:521259‑M2/150‑56 (MQ=255) tttGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctgacaggcgcacacgatctgacatttgcatccaacttc < 1:656172‑M2/150‑59 (MQ=255) tttGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttc > 1:4099467‑M2/1‑92 (MQ=255) gTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgtt < 1:1391312‑M2/150‑62 (MQ=255) aTCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttac < 1:358530‑M2/150‑64 (MQ=255) cTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttactta > 1:575842‑M2/1‑84 (MQ=255) ccTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggc > 1:1056014‑M2/1‑80 (MQ=255) ccTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggc > 1:3627512‑M2/1‑80 (MQ=255) cTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcc < 1:2281325‑M2/150‑72 (MQ=255) cTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcc > 1:3032688‑M2/1‑79 (MQ=255) gTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAGTGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttactgacggcccg > 1:4071342‑M2/1‑77 (MQ=255) gTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccg < 1:531514‑M2/150‑74 (MQ=255) ttATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgt < 1:2382697‑M2/150‑75 (MQ=255) ttATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgt > 1:2918414‑M2/1‑76 (MQ=255) aGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCCATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg > 1:41629‑M2/1‑69 (MQ=255) gAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacatgcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgc > 1:1957856‑M2/1‑65 (MQ=255) tAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccgg > 1:2289882‑M2/1‑61 (MQ=255) gTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGTGCCTATAATGctctcttaccagccgcgccctgacaggcgcacacgatctgacatttgcatccaacttcgttacttacggc > 1:2953248‑M2/1‑59 (MQ=255) gTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggat > 1:1232954‑M2/1‑59 (MQ=255) gTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggat > 1:454767‑M2/1‑59 (MQ=255) gTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggat < 1:3240724‑M2/150‑92 (MQ=255) gTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacgacccgtaaacgggctgcccgggt < 1:2158304‑M2/150‑92 (MQ=255) tattatTCAATAAATATCCTCCGGCATAGCCGGAGATTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggata > 1:2399238‑M2/1‑58 (MQ=255) tattatTCAATAAATATCCTCCGGCATAGCAGGCGGTTTTTCAAATGCGCCTATCAGGctctcttcccagccgcaccctaacaggcgcacacgatctgaaatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggata < 1:2829428‑M2/150‑93 (MQ=255) attattCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatag < 1:3234908‑M2/150‑94 (MQ=255) ttattCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagg > 1:1960840‑M2/1‑56 (MQ=255) attCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCACATGTGCCTATACGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatcccacttcattacttacggcccgtcaacgggctgcccggataggga < 1:3247264‑M2/150‑97 (MQ=255) | TAATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑G > Xen14_46/40178‑40351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |