| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_110 | 1 = | 0 (0.000) | 35 (0.050) | 30/246 | 0.7 | 100% | intergenic (–/+87) | –/ompW | –/Outer membrane protein W |
| ? | Xen14_168 | 26 = | 0 (0.000) | intergenic (–/+34) | –/Xen14_04774 | –/IS200/IS605 family transposase IS200C | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTACGTTGTCAGAA > Xen14_110/1‑148 | cctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGt < 1:1013147‑M1/81‑1 (MQ=255) ctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTa > 1:2059147‑M1/69‑150 (MQ=255) tatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTaa < 1:1723103‑M1/83‑1 (MQ=255) cgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGTGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTaaaaaa > 1:1987156‑M1/64‑150 (MQ=255) cgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGTGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTaaaaaa > 1:1987161‑M1/64‑150 (MQ=255) gggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAAt > 1:985809‑M1/63‑150 (MQ=255) gcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTa > 1:3583884‑M1/61‑150 (MQ=255) cagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGACGGAGGATATTTATTGATGGTAAAAAATTAg < 1:3788588‑M1/91‑1 (MQ=255) cccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAg < 1:3521978‑M1/94‑1 (MQ=255) cgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGTCTCATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTCTTGATGGTAAAAAATTAGAAGCg < 1:972761‑M1/96‑1 (MQ=255) cgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCg > 1:3394483‑M1/55‑150 (MQ=255) tttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCTGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGt > 1:651584‑M1/53‑150 (MQ=255) tttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGt > 1:2327969‑M1/53‑150 (MQ=255) ttacgggccgtaagtaacgaaggtggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTa > 1:4160017‑M1/52‑150 (MQ=255) acgggccgtaagtaacgaatttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGTAGGATATCTATTGATGGTAAAAAATTAGAAGCGGTAAc > 1:1365562‑M1/50‑150 (MQ=255) gccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGc < 1:1493035‑M1/105‑1 (MQ=255) agtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGaa > 1:3478357‑M1/40‑150 (MQ=255) gtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAAc > 1:2192594‑M1/39‑150 (MQ=255) gtaacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAAc > 1:2192595‑M1/39‑150 (MQ=255) ggaacgaggttggatgcaaatgtcaaatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGGAAAAAATTAGAAGCGGTAACCCGCAGAGAAc > 1:2192588‑M1/39‑150 (MQ=255) taacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACa < 1:677372‑M1/113‑1 (MQ=255) aacgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAg < 1:2204678‑M1/91‑1 (MQ=255) acgaagttggatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATa > 1:2365754‑M1/36‑150 (MQ=255) gatgcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCAc < 1:2044843‑M1/124‑1 (MQ=255) gcaaatgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACggg > 1:1774755‑M1/24‑150 (MQ=255) tgtcagatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAg < 1:748730‑M1/132‑1 (MQ=255) gatcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTa < 1:2364425‑M1/137‑1 (MQ=255) gatcgtgtgcgccTGTTAGGGCGCGGCCGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTa > 1:2822877‑M1/14‑150 (MQ=255) atcgtgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTAc < 1:934498‑M1/138‑1 (MQ=255) tgtgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTACGTTg > 1:1826513‑M1/9‑150 (MQ=255) tgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTACGTTGTc > 1:3156992‑M1/7‑150 (MQ=255) tgcgccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTACGTTGTc > 1:3156993‑M1/7‑150 (MQ=255) cgccTGTTAGGGCGCGGNTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTACGTTGTCAg < 1:2191353‑M1/146‑1 (MQ=255) gccTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGACATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTACGTTGTCAGa < 1:3335710‑M1/147‑1 (MQ=255) ccTGTTAGGGCGCGGCTGGTTAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTACGTTGTCAGaa < 1:2678859‑M1/148‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTGATGGTAAAAAATTAGAAGCGGTAACCCGCAGAGAACATAAATACCCACGGGTCAAGGCGTACGTTGTCAGAA > Xen14_110/1‑148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |