New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_106 = 1601150 (1.200)74 (0.140) 40/296 2.9 49.7% coding (17/453 nt) Xen14_04641 IS256 family transposase IS1414
?Xen14_167 = 666 0 (0.000)intergenic (+42/–) Xen14_04773/– IS3 family transposase IS629/–

Only 100 of 224 total aligned reads displayed.

AATCATTGGAATATCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGAAAAATCAGTCCAGAC  >  Xen14_106/1455‑1750
                                                                                                                                                  |                                                                                                                                                     
    aTTGGAATATCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGCTATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGct                                                                                                                                                >  1:840593/1‑150 (MQ=255)
    aTTGGAATATCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGct                                                                                                                                                >  1:1387494/1‑150 (MQ=255)
       ggAATATCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTg                                                                                                                                             >  1:1954595/1‑150 (MQ=255)
         aaTATCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGc                                                                                                                                           <  1:3401716/150‑1 (MQ=255)
            atCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAGAAACAGTTACAGGCTCTgtc                                                                                                                                           >  1:2657131/1‑145 (MQ=255)
            atCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTaa                                                                                                                                        >  1:692318/1‑150 (MQ=255)
            atCGCGATGGAGCGCCACATTACCCATTAGGCGATCAAGTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGctcgggataa                                                                                                                                        <  1:2851322/150‑8 (MQ=25)
             tCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAAc                                                                                                                                       <  1:3410301/150‑1 (MQ=255)
               gcgATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGa                                                                                                                                     >  1:1960392/1‑150 (MQ=255)
                 gATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAAc                                                                                                                                   <  1:1617538/150‑1 (MQ=255)
                   tGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTg                                                                                                                                 <  1:788898/150‑1 (MQ=255)
                   tGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTg                                                                                                                                 <  1:2120652/150‑1 (MQ=255)
                      aGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTcc                                                                                                                              >  1:2598668/1‑150 (MQ=255)
                      aGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTcc                                                                                                                              >  1:2598670/1‑150 (MQ=255)
                        cgcCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCaa                                                                                                                            >  1:25187/1‑150 (MQ=255)
                        cgcCCCATTACCCATGAGACGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCaa                                                                                                                            <  1:2799317/150‑1 (MQ=255)
                          ccccATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCaaaa                                                                                                                          <  1:1425367/150‑1 (MQ=255)
                           cccATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTcc                                                                                                                              >  1:1578130/1‑145 (MQ=255)
                           cccATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCaaaaa                                                                                                                         <  1:2618604/150‑1 (MQ=255)
                             cATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAAcc                                                                                                                       <  1:3743121/150‑1 (MQ=255)
                                  cccATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCaaa                                                                                                                  >  1:3572274/1‑150 (MQ=255)
                                  cccATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTATGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCaaa                                                                                                                  >  1:2277443/1‑150 (MQ=255)
                                   ccATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGACAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCaaaa                                                                                                                 >  1:2299808/1‑150 (MQ=255)
                                   ccATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCaaaa                                                                                                                 <  1:4110373/150‑1 (MQ=255)
                                          gCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGa                                                                                                          <  1:1978798/150‑1 (MQ=255)
                                            gATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCTTGAAg                                                                                                        <  1:3777811/150‑1 (MQ=255)
                                            gATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAg                                                                                                        <  1:860150/150‑1 (MQ=255)
                                               cAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAATGAACTGTCCAAAAACCTCAAAACCCCTGAAGAcc                                                                                                     <  1:3174141/150‑1 (MQ=255)
                                                  ttGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCtca                                                                                                  <  1:310864/150‑1 (MQ=255)
                                                    gCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGGAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCtcagt                                                                                                >  1:2233200/1‑150 (MQ=255)
                                                    gCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCtcagt                                                                                                >  1:1420850/1‑150 (MQ=255)
                                                    gCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCtcag                                                                                                 <  1:1252984/149‑1 (MQ=255)
                                                          gagCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTcagtcagt                                                                                            <  1:729460/148‑1 (MQ=255)
                                                          gagCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGttt                                                                                          <  1:145845/150‑1 (MQ=255)
                                                          gagCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGttt                                                                                          <  1:145849/150‑1 (MQ=255)
                                                                 tgCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGgc                                                                                   <  1:4082543/150‑1 (MQ=255)
                                                                  gCATAAATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAGGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGgct                                                                                  >  1:3547047/1‑150 (MQ=255)
                                                                            gtgtAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAg                                                                        >  1:3977356/1‑150 (MQ=255)
                                                                            gtgtAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAg                                                                        <  1:2352584/150‑1 (MQ=255)
                                                                              gtAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCt                                                                      >  1:1479778/1‑150 (MQ=255)
                                                                                   tGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCg                                                                 <  1:4315680/150‑1 (MQ=255)
                                                                                      cTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTg                                                              >  1:625534/1‑150 (MQ=255)
                                                                                       tGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGa                                                             >  1:3658012/1‑150 (MQ=255)
                                                                                       tGATTTTGATATGTTCAATCCAACATCAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttc                                                             >  1:2033839‑M1/1‑60 (MQ=255)
                                                                                        gATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGaa                                                            >  1:1489242/1‑150 (MQ=255)
                                                                                         aTTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAg                                                           >  1:815626/1‑150 (MQ=255)
                                                                                         aTTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAg                                                           >  1:815632/1‑150 (MQ=255)
                                                                                         aTTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAg                                                           >  1:1496181/1‑150 (MQ=255)
                                                                                          ttttGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAGAGCTCAGCGTTGAAGc                                                          >  1:2043652/1‑150 (MQ=255)
                                                                                            ttGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCg                                                        >  1:3070337/1‑150 (MQ=255)
                                                                                            ttGATATGTTCAATCCAACATCAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgctt                                                        <  1:1359679‑M1/150‑96 (MQ=255)
                                                                                              gATATGTTCAATCCAACATCAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttct                                                      >  1:665030‑M1/1‑53 (MQ=255)
                                                                                               atatGTTCAATCCAACATCAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctg                                                     <  1:3621377‑M1/150‑99 (MQ=255)
                                                                                                 atGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCATTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCtctc                                                   <  1:4117613/150‑1 (MQ=255)
                                                                                                 atGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCtctc                                                   <  1:1741188/150‑1 (MQ=255)
                                                                                                   gTTCAATCCAGCATCAAATNAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAA‑CCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAAt                                                >  1:3906871/1‑150 (MQ=255)
                                                                                                   gTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCaa                                                 >  1:1154068/1‑150 (MQ=255)
                                                                                                   gTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTATGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGaa                                                            >  1:3848977/1‑139 (MQ=255)
                                                                                                   gTTCAATCCAACATCAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaatcgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccgg                                                 >  1:465831‑M1/1‑48 (MQ=255)
                                                                                                   gTTCAATCCAACATCAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccgg                                                 >  1:31266‑M1/1‑48 (MQ=255)
                                                                                                          ccAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTgag                                          <  1:1297201/150‑1 (MQ=255)
                                                                                                          ccAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTCACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAANAAGCTCAGCGTTGAAGCCGCTCTCAATGCTgag                                          >  1:1501457/1‑150 (MQ=255)
                                                                                                           caacatcAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggag                                            <  1:1529775‑M1/144‑108 (MQ=255)
                                                                                                             gCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATg                                       >  1:819631/1‑150 (MQ=255)
                                                                                                              cATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGa                                      >  1:4052399/1‑150 (MQ=255)
                                                                                                              cATCAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggc                                      <  1:2551704‑M1/150‑114 (MQ=255)
                                                                                                               aTCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCCGAGATGac                                     >  1:439411/1‑150 (MQ=255)
                                                                                                               aTCAAAAGCAGGTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcc                                     <  1:1585112‑M1/150‑115 (MQ=255)
                                                                                                                 caaaagcaggttaatTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggccca                                   >  1:4194423‑M1/8‑34 (MQ=255)
                                                                                                                  aaaagcaggttaaTTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccag                                  >  1:2884933‑M1/7‑33 (MQ=255)
                                                                                                                  aaaagcaggttaaTTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccag                                  <  1:3149237‑M1/144‑118 (MQ=255)
                                                                                                                   aaagtaggttaATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagc                                 <  1:1668545‑M1/145‑119 (MQ=255)
                                                                                                                    aagcaggttAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcc                                <  1:3001585‑M1/146‑120 (MQ=255)
                                                                                                                       cagGTTACTTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagccttttctgcttctgccggaggagtatggcccagccttt                             >  1:3723954‑M1/2‑28 (MQ=255)
                                                                                                                         ggTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttcc                           >  1:3824192‑M1/1‑26 (MQ=255)
                                                                                                                         ggTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCtt                           >  1:1853059/1‑150 (MQ=255)
                                                                                                                          gTTAATTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttcca                          >  1:2145859‑M1/1‑25 (MQ=255)
                                                                                                                              aTTTATGGACGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaa                      >  1:3886232‑M1/1‑21 (MQ=255)
                                                                                                                                  aTGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATgag                  <  1:7062/150‑1 (MQ=255)
                                                                                                                                   aatatttgacaaaggttgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtc                 <  1:159892‑M1/135‑135 (MQ=255)
                                                                                                                                    ggACGAAAAACAGTTACAGGCTCTGGCTAACGAAATGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGaa                >  1:889624/1‑150 (MQ=255)
                                                                                                                                      atttgacaaaggttgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgat              <  1:3928435‑M1/138‑138 (MQ=255)
                                                                                                                                      aCGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgat              >  1:2505213‑M1/1‑13 (MQ=255)
                                                                                                                                      aCGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgat              >  1:2748490‑M1/1‑13 (MQ=255)
                                                                                                                                       tttgacaaaggttgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgatt             <  1:3183417‑M1/139‑139 (MQ=255)
                                                                                                                                       cGAAAAACAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgatt             >  1:512544‑M1/1‑12 (MQ=255)
                                                                                                                                       cGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGaaaaa             <  1:2442905/150‑1 (MQ=255)
                                                                                                                                        ttgacaaaggttgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgattg            <  1:1210428‑M1/140‑140 (MQ=255)
                                                                                                                                         aaaaaCAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGaaaa              <  1:3018606/147‑1 (MQ=255)
                                                                                                                                          aaaaCAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgatt             >  1:3238646‑M1/1‑9 (MQ=255)
                                                                                                                                           aaaCAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGAAAAATCAg         <  1:1875640/150‑1 (MQ=255)
                                                                                                                                           aaaCAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGAAAAATCAg         <  1:915452/150‑1 (MQ=255)
                                                                                                                                            aaCAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATgag                  >  1:3520908/1‑140 (MQ=255)
                                                                                                                                             aCAGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgattgttata       <  1:4080850‑M1/150‑145 (MQ=255)
                                                                                                                                               aGTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgattgttatacc     <  1:1053611‑M1/150‑147 (MQ=255)
                                                                                                                                                ggttgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaatcgtcgattgttatacca    >  1:2261192‑M1/3‑3 (MQ=255)
                                                                                                                                                gTTtgaaccgccccgggtttcctggagagtgttttatctgtgaactcaggctgccagatcatcgtttccgatggaagcataataagctttttctgcttctgccggaggagtatggcccagcctttccagcaa                      <  1:216136‑M1/132‑130 (MQ=255)
                                                                                                                                                 ttACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGAAAAATCAGTCCAGa   <  1:1794431/150‑1 (MQ=255)
                                                                                                                                                 ttACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCCCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGAAAAATCAGTCCAGa   >  1:715035/1‑150 (MQ=255)
                                                                                                                                                  tACAGGCTCTGGTTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGAAAAATCAGTCCAGAc  <  1:3325447/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
AATCATTGGAATATCGCGATGGAGCGCCCCATTACCCATGAGGCGATCAATTGCAAAAGAGCCTGTGCATAGATTTGTGTAATTGCCTGATTTTGATATGTTCAATCCAGCATCAAATGAAGGTTAATTTATGGACGAAAAACAGTTACAGGCTCTGGCTAACGAACTGTCCAAAAACCTCAAAACCCCTGAAGACCTCAGTCAGTTTGATCGGCTGCTGAAAAAGCTCAGCGTTGAAGCCGCTCTCAATGCTGAGATGACACACCATCTTGGGTATGAGAAAAATCAGTCCAGAC  >  Xen14_106/1455‑1750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.