| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_172 | 1 = | 0 (0.000) | 31 (0.460) | 21/294 | 1.4 | 38.0% | intergenic (–/+60) | –/Xen14_04777 | –/hypothetical protein |
| ? | Xen14_64 | = 2419 | 101 (1.200) | coding (62/699 nt) | Xen14_04183 | hypothetical protein | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGTCACCTTTAT > Xen14_172/1‑147 | gttctgctcattacagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAAc > 1:3892647‑M1/69‑150 (MQ=255)gttctgctcattacagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTCCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAAc > 1:3929211‑M1/69‑150 (MQ=255)gttctgctcattacagaaaaaataacgttctccaccgacctctgtcagatcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGATGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAAc > 1:4231755‑M1/69‑150 (MQ=255) tcattacagaaaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTgcgc < 1:3239132‑M1/89‑1 (MQ=255) aaaaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAac > 1:83992‑M1/52‑150 (MQ=255) aaaataacgttcttcaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCCGTTCAAACTCTGCGCTGAACTCAaca > 1:3037412‑M1/51‑150 (MQ=255) aaataacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAacac < 1:3774012‑M1/101‑1 (MQ=255) taacgttctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGCGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACgca > 1:4176463‑M1/47‑150 (MQ=255) tctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGGCTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATAc < 1:3872714‑M1/110‑1 (MQ=255) ctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACt > 1:977998‑M1/40‑150 (MQ=255) ctccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACt < 1:4056124‑M1/111‑1 (MQ=255) tcctccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAGCTCTGCGCTGAACTCAACACGCAGCATACTg > 1:1354143‑M1/39‑150 (MQ=255) ccaccgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGa < 1:1450010‑M1/113‑1 (MQ=255) cgacctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCcg < 1:1663157‑M1/117‑1 (MQ=255) cctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGcga < 1:2028119‑M1/120‑1 (MQ=255) cctctgtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGcga < 1:3627128‑M1/120‑1 (MQ=255) gtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGAcc > 1:2116721‑M1/26‑150 (MQ=255) gtcaggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGAcc > 1:2116722‑M1/26‑150 (MQ=255) aggtcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCAtt < 1:2782365‑M1/128‑1 (MQ=255) ggtcgatttcccagagcaccaCGCTGGCNGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCgacgac > 1:1501677‑M1/22‑145 (MQ=255) tcgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGATGACCATTTTg < 1:2423446‑M1/131‑1 (MQ=255) cgatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTgc < 1:293231‑M1/132‑1 (MQ=255) gatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTgcg < 1:1869197‑M1/133‑1 (MQ=255) gatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTgcg < 1:607374‑M1/133‑1 (MQ=255) gatttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTgcg < 1:1387484‑M1/133‑1 (MQ=255) ttcccagagcaccaCGCTGGCCGACTGCTCCGCATGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAg < 1:2189918‑M1/136‑1 (MQ=255) ttcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAg < 1:1130564‑M1/136‑1 (MQ=255) tcccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTgcg < 1:3951790‑M1/88‑1 (MQ=255) cccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGt < 1:729903‑M1/138‑1 (MQ=255) ccagagcaccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCNTTTTGCGCAGGTc > 1:2435518‑M1/12‑150 (MQ=255) ccaCGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGTCACCTTTAt < 1:2921501‑M1/147‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTGGCCGACTGCTCCGCACGGGTGCATTCATTCAGTGTTTCCTGCCGGATATCCTGCATCAGTTCACCACCTGTTCAAACTCTGCGCTGAACTCAACACGCAGCATACTGACCCGCGACGACCATTTTGCGCAGGTCACCTTTAT > Xen14_172/1‑147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |