| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_148 | = 989 | 0 (0.000) | 57 (0.660) | 38/202 | 0.1 | 100% | intergenic (‑92/–) | Xen14_04761/– | hypothetical protein/– |
| ? | Xen14_182 | = 431 | 0 (0.000) | intergenic (+22/–) | Xen14_04782/– | hypothetical protein/– | |||||
ACCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_148/842‑989‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacaaacatcaccatggcatgacaacaaaaaccggagccggactccGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATCAGCT < Xen14_182/431‑330 ACCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGG < 1:380364/150‑1ACCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGG < 1:380363/150‑1ACCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGG < 1:380362/150‑1ACCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGG < 1:380365/150‑1ACCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGG < 1:380366/150‑1ACCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGG > 1:3034137/1‑150 CCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGGCAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGT < 1:234441/150‑1 CCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCATCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGT > 1:2235605/1‑150 GCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTT > 1:1664080/1‑150 GCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTT < 1:3005745/150‑1 CATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTT < 1:600463/150‑1 ATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTT > 1:45602/1‑150 TTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTT < 1:2696426/150‑1 TCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTG > 1:2149220/1‑150 ATTGAAGACCTGAAACTAATGATGGCATGACAAAACTCCATATTTAAATAGTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAAAAAAAACCGGAGCCGTTCTCCGGTTTTTTTGTGAACCCGTCGGCGATTTCA < 1:3153316/150‑1 CCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGTCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCA > 1:2638395/1‑150 CCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCA > 1:456979/1‑150 CTGAAACTAATGATGGCATGGCAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAA > 1:1125275/1‑150 CTGAAACTAATGATGGCATGGCAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAA > 1:1125274/1‑150 CTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGGCAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAA > 1:34412/1‑150 CTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAA < 1:3135368/150‑1 CTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTTTGAACTCGTCGGCTATTTCATCCCGCCAACATTTT > 1:4036806/1‑150 TAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTC < 1:936507/150‑1 TAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTC < 1:2209836/150‑1 GATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACACCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGNTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCAC < 1:3948899/150‑1 ATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACG < 1:1788296/150‑1 ATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACG < 1:2006010/150‑1 GCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCC > 1:346984/1‑150 GCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCC > 1:346987/1‑150 CATGACAAAACTCCCTATGTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCC < 1:1367770/150‑1 CTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAA‑CCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCA > 1:1767601/1‑150 CTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAA‑CCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCA > 1:1767598/1‑150 CCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTCTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAG > 1:1795304/1‑150 TAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCAGGACTCAGGTTTTTTTGTGAACCCGTCGGCGATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGC > 1:4307001/1‑150 AAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCA < 1:1389338/150‑1 AATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCC > 1:1278198/1‑121 ATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACCACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGC < 1:1193521/150‑1 TTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGT > 1:1220382/1‑150 TTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGT > 1:1468052/1‑150 CATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCTTGTTTTTTTGTGAACTCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCT < 1:992111/150‑1 TTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTA < 1:4326038/150‑1 CCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGTGGTCTTACC < 1:2328580/150‑1 CCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTT‑GTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCA < 1:1148064/150‑1 CAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCA > 1:3233730/1‑150 CAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCA > 1:2158012/1‑150 CAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCA > 1:2002740/1‑150 ACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACAC > 1:971546/1‑150 ACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACAC > 1:971549/1‑150 CACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACA < 1:362465/150‑1 AGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATC < 1:3081351/150‑1 GTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATCA > 1:2373810/1‑150 GTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATCA > 1:1979116/1‑150 GTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACCGTATCA > 1:3453241/1‑150 TCATAACGAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATCAG < 1:98504/150‑1 TCATAACGAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATCAG < 1:98507/150‑1 TCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATCAG < 1:3958491/150‑1 ATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCCGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCAGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATCAGCT > 1:3838450/1‑150 ACCTGCATTCCGGTGGAAAGTGAGGATGATTGAATACCTGAAACTAATGATGGCATGACAAAACTCCCTATTTAAATATTCATTCCAAACACAGGGAGTCATAACAAACATCACCATGGCATGACAACAAAAACCGGAGCCGGACTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_148/842‑989‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taacaaacatcaccatggcatgacaacaaaaaccggagccggactccGGTTTTTTTGTGAACCCGTCGGCTATTTCATCCCGCCAATATTTTCCCACGTCCCGTCAGCACGCAGGATTTGCAGCGGTCTTACCACACACTGTATCAGCT < Xen14_182/431‑330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |