| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_145 | 1 = | 0 (0.000) | 60 (0.200) | 40/210 | 2.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | Xen14_183 | 44 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TGCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_145/114‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagatgctgcatttgcatagtgcaatctccccttacttatccGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGTGAACTGCATAG > Xen14_183/44‑148 TGCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATT > 1:462796/1‑150TGCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATT > 1:2931510/1‑150 GCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTA > 1:3688754/1‑150 GCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTA > 1:2644326/1‑150 CTATATCAGCCATCACTGAAAGCCTCGACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAA > 1:71083/1‑150 CTATATCAGCCATCACTGAAAGCCTCGACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAA > 1:71082/1‑150 CTATATCAGCCATCACTGAAAGCCTCGACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAA > 1:71081/1‑150 CTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAA > 1:2813414/1‑150 TATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCAGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAAT > 1:3188284/1‑150 CAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAG < 1:67616/150‑1 CAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAG < 1:3323656/150‑1 AGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCGTTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGG > 1:1794761/1‑150 GCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTGGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATA < 1:1944614/144‑1 GCCATCACTGAAAGCCTCAACGCATAATCGACCGTTTGGTAGTACTTGGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATA < 1:1944611/144‑1 ATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCCCTGTGAACTTACACATTAATACCAGGGCAG > 1:3152696/1‑150 TCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGG > 1:1830119/1‑150 TCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGG < 1:2140785/150‑1 CACTGAAAGCCTCAACGCATAATCGACCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGG < 1:2664179/150‑1 ACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGC < 1:2757572/150‑1 ACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGC > 1:1240642/1‑150 GAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATT > 1:16515/1‑150 GAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATT > 1:2894104/1‑150 AAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAA < 1:2642040/150‑1 AAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAA < 1:1605355/150‑1 GCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATA < 1:2867199/150‑1 CCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAA > 1:2188829/1‑150 CCTCAACGCATAATCGACCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACC < 1:3806604/132‑1 CTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAG > 1:2881700/1‑150 CTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAG < 1:2377496/150‑1 CTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAG > 1:3280576/1‑150 CGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCAT < 1:64473/150‑1 ATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTac > 1:3598191/1‑148 ATAATCGACCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCC < 1:715193/150‑1 TAATCGGCCGTTTGGTAGGACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTTCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATNCCC < 1:3800444/150‑1 ATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAG < 1:3869547/122‑1 ATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGACAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGACATTAATAAGGCCATTCACTC > 1:3736871/1‑150 GTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATG < 1:502426/150‑1 TGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATTGCT < 1:957994/150‑1 TGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCT < 1:2397356/150‑1 TGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCT < 1:2397357/150‑1 TGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCT < 1:449908/150‑1 TAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGAT < 1:204836/150‑1 CTTAGGATAGCCAACCATTAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTAC > 1:361051/1‑150 CTTAGGATAGCCAACCATCAGATGCTGCATCTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTAC < 1:245481/150‑1 CTTAGGATAGCCAACCATCAGATGCTGCATCTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTAC < 1:245483/150‑1 TTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACT < 1:1303461/150‑1 TTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACT < 1:915693/150‑1 TTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACT < 1:915692/150‑1 TAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTG > 1:4231473/1‑150 AGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGG > 1:3674344/1‑150 GGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGT > 1:3611370/1‑150 GGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGACTGATTTTACTGGT > 1:323698/1‑150 GATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGTG < 1:3984605/150‑1 TAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACCGGTGAA < 1:2824197/150‑1 TAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACCGGTGAA < 1:2824199/150‑1 CCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGTGAACTG < 1:4024893/150‑1 CAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGTGAACTGC < 1:1881056/150‑1 CAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGTGAACTGC < 1:1881055/150‑1 CCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGTGAACTGCATA < 1:1466047/150‑1 CATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCCGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGTGAACTGCATAG < 1:677323/150‑1 TGCTATATCAGCCATCACTGAAAGCCTCAACGCATAATCGGCCGTTTGGTAGTACTTAGGATAGCCAACCATCAGATGCTGCATTTGCATAGTGCAATCTCCCCTTACTTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_145/114‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcagatgctgcatttgcatagtgcaatctccccttacttatccGGAGGCAATTGCAATATCTCTGTGAACTTACACATTAATACCAGGGCAGGGCATTAATAAGGCCATTCCCTCTCTGATGGCTGATTTTACTGGTGAACTGCATAG > Xen14_183/44‑148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |