New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_115 = 77NA (NA)72 (0.580) 41/296 2.8 39.1% intergenic (–/‑777) –/Xen14_04695 –/hypothetical protein
?Xen14_43 = 39557 112 (0.910)intergenic (‑21/+364) yhdJ_2/Xen14_03575 DNA adenine methyltransferase YhdJ/hypothetical protein

‑‑‑‑‑‑‑‑‑‑‑‑TGGTTCAGACATCAGGATATGGCTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_115/1‑77
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGTAAGAGAAGGAGTTTTGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTCCGTGACCGTTCCGGGCGCAC  <  Xen14_43/39557‑39415
                                                                                                                                                                                                                                        
atgtgggatggcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCCGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGG                                                                                    <  1:1404700/138‑1
  gtgggatggcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCC                                                                                  >  1:294651/11‑150
   tgggatggcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCC                                                                                 >  1:3214755/10‑150
         ggcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTCATGGCCCGTATCC                                                                           >  1:3005459/4‑150
          gcTGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCC                                                                          <  1:623967/148‑1
            TGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTG                                                                        <  1:85285/150‑1
            TGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTG                                                                        <  1:2571975/150‑1
            TGGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTG                                                                        <  1:437009/150‑1
             GGTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGA                                                                       >  1:1339568/1‑150
              GTTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGAT                                                                      >  1:3409393/1‑150
               TTCAGACTTCAGGGTATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                     <  1:2296636/150‑1
               TTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                     >  1:3548752/1‑150
               TTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                     <  1:2007261/150‑1
               TTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                     <  1:2007260/150‑1
               TTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                     >  1:1360112/1‑150
               TTCAGACTTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                     >  1:1298575/1‑150
                tcagaatTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAA                                                                    >  1:777403/8‑150
                   gactTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGC                                                                 >  1:2131980/5‑150
                    actTCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCC                                                                <  1:3463642/147‑1
                       TCAGGATATGGTTGAGGGTTACCTGGTGATGAAGTCTCTTGATCGGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATT                                                             >  1:2094251/1‑150
                                        GTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGA                                            >  1:956418/1‑150
                                        GTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATCGATTTCATCCTCACCGA                                            >  1:75504/1‑150
                                            CCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCACGT                                                                               <  1:2167188/111‑1
                                             CTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCCTCCTCACCGACCCGC                                       >  1:3730793/1‑150
                                             CTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGC                                       >  1:3383477/1‑150
                                             CTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGC                                       >  1:900516/1‑150
                                             CTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTATAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGC                                       <  1:835472/150‑1
                                              TGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCAGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCC                                      >  1:2033367/1‑150
                                               GGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCG                                     >  1:1459079/1‑150
                                                GTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGT                                    >  1:31475/1‑150
                                                   ATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACC                                 >  1:1489719/1‑150
                                                   ATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACC                                 >  1:1489721/1‑150
                                                   ATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACC                                 >  1:1489722/1‑150
                                                    TGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCT                                >  1:3618340/1‑150
                                                     GAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTC                               >  1:1398288/1‑150
                                                       AGTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGCCCCTCCGTACCTCGT                             >  1:3416761/1‑150
                                                        GTCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTC                            >  1:385819/1‑150
                                                         TCTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCG                           <  1:3571612/150‑1
                                                          CTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTAtcgtcagcc                          >  1:139365/1‑141
                                                          CTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGG                          >  1:2835988/1‑150
                                                          CTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGG                          <  1:521630/150‑1
                                                          CTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGG                          >  1:2835987/1‑150
                                                          CTCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATCGATTTCATCCTTACCGACCCGCCGTACCTCGTCGG                          >  1:275677/1‑150
                                                           TCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGT                         >  1:375047/1‑150
                                                           TCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGT                         >  1:240272/1‑150
                                                           TCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGT                         >  1:3375633/1‑150
                                                           TCTTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGGAACTGCATCGATGTTATGGCCCGTATCCCTGATA                                                                     <  1:1737298/106‑1
                                                             TTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTT                       <  1:175159/150‑1
                                                             TTGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTT                       <  1:1443497/150‑1
                                                              tgatcagatctcCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCGTCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTt                      >  1:610982/13‑149
                                                              TGATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTt                      >  1:3253359/1‑149
                                                               GATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTtc                     >  1:3166340/1‑148
                                                                atcagatctcCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCTACCCGCCGTACCTCGTCGGTTTtcg                    >  1:3790181/11‑147
                                                                ATCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTT                                                        >  1:3419740/1‑114
                                                                 TCAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGT                   >  1:4008551/1‑150
                                                                  CAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTG                  >  1:2974484/1‑150
                                                                  CAGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCAGCCGTACCTCGTCGGTTTTCGTG                  <  1:2997395/150‑1
                                                                   AGGAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGA                 >  1:185165/1‑150
                                                                     GAGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCATATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACC               >  1:888585/1‑150
                                                                      AGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCG              <  1:2725509/150‑1
                                                                      AGATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCG              >  1:4015237/1‑150
                                                                        ATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTc            <  1:1119911/150‑2
                                                                        ATCTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTT                       >  1:3854575/1‑139
                                                                          CTGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcag          >  1:621017/1‑147
                                                                           TGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcagg         >  1:3589679/1‑146
                                                                           TGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcagg         >  1:1176089/1‑146
                                                                           TGATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcagg         >  1:1176088/1‑146
                                                                            GATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCGCCGACCCGCCGTACC                                 <  1:4163470/125‑1
                                                                            GATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggg        >  1:3765910/1‑145
                                                                             ATCAAGAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcagggg       <  1:1630349/150‑7
                                                                                  GAGACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTTCGTGACCGTcaggggcgtac  <  1:1138165/150‑12
                                                                                    GACAGCTGTAAGAGAAGGAGTTTGGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTT                        <  1:4075321/126‑1
                                                                                                                                                                                                                                        
‑‑‑‑‑‑‑‑‑‑‑‑TGGTTCAGACATCAGGATATGGCTGAGGGTTACCTGGTGATGAAGTCTCTTGATCAGGAGATCTGATCAAGAGACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Xen14_115/1‑77
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGTAAGAGAAGGAGTTTTGTATGTCCCGTTTTGTCCTCGGTAACTGCATCGATGTTATGGCCCGTATCCCTGATAACGCCATTGATTTCATCCTCACCGACCCGCCGTACCTCGTCGGTTTCCGTGACCGTTCCGGGCGCAC  <  Xen14_43/39557‑39415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.