| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_126 | 2,063 | 0 | C | A | 77.8% | 1560.5 / inf | 782 | L93I (CTT→ATT) | Xen14_04726 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (61/112); new base A (311/297); total (372/410) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.76e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 786 total aligned reads displayed.
TGATAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATTTC > Xen14_126/1915‑2210 | aTGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTCACTc > 1:1081985/1‑150 (MQ=255) aTTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCt < 1:3378307/150‑1 (MQ=255) aTGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑c > 1:1976933/1‑150 (MQ=255) tGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑cc < 1:2770572/150‑1 (MQ=255) gCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGTGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑cttc < 1:933392/150‑4 (MQ=255) cTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑cttcc < 1:128026/150‑5 (MQ=255) aggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑cttccact < 1:358740/144‑8 (MQ=255) ctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑cttccactcag > 1:1045367/4‑140 (MQ=255) ctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑cttccactcag > 1:1870597/4‑140 (MQ=255) ctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTATTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCCGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑cttccactcag > 1:1557856/4‑140 (MQ=255) tctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑cttccactcaga > 1:3321122/3‑139 (MQ=255) tctGGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑cttccactcaga > 1:1002077/3‑139 (MQ=255) tGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGa < 1:1580374/142‑1 (MQ=255) ggCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑cttccactcagacca > 1:3445788/1‑136 (MQ=255) ggCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑cttccactcagacca > 1:1257299/1‑136 (MQ=255) gCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAg < 1:2717472/150‑1 (MQ=255) cAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGt > 1:235113/1‑150 (MQ=255) aaGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACATTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCt < 1:2378666/150‑1 (MQ=255) tttcgCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcct > 1:2856473‑M1/3‑118 (MQ=255) gcggcgTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGACTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGa > 1:1231312/1‑150 (MQ=255) gcgTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGtt < 1:1813681/150‑1 (MQ=255) cgTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtg < 1:3727885‑M1/150‑41 (MQ=255) tttCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CATACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTc < 1:3243728/150‑1 (MQ=255) cGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattcc > 1:844080‑M1/1‑103 (MQ=255) cGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACg < 1:2567492/150‑1 (MQ=255) ggTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccg < 1:2685459‑M1/150‑49 (MQ=255) ggTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACgg < 1:3185267/150‑1 (MQ=255) aacgacctctTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtca < 1:1940081‑M1/146‑52 (MQ=255) acgacctcTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcac > 1:1634113‑M1/4‑98 (MQ=255) acgacctcTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcac < 1:2395775‑M1/147‑53 (MQ=255) cgacctCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacg > 1:943934‑M1/3‑97 (MQ=255) cgacctCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacg > 1:2559619‑M1/3‑97 (MQ=255) cgacctCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacc > 1:1523989‑M1/3‑97 (MQ=255) caacCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCATAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cctccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacg > 1:3677322‑M1/1‑97 (MQ=255) gaccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg < 1:1322780‑M1/149‑55 (MQ=255) gaccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg < 1:2065867‑M1/149‑55 (MQ=255) gaccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg < 1:3805106‑M1/149‑55 (MQ=255) gaccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg > 1:1402969‑M1/2‑96 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:1617452‑M1/1‑94 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:68919‑M1/1‑94 (MQ=255) ctctTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaa > 1:796320‑M1/1‑93 (MQ=255) ctctTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCACCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaa < 1:2889164‑M1/150‑58 (MQ=255) tcttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaac > 1:142519‑M1/1‑92 (MQ=255) tntGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatg > 1:3561025‑M1/1‑89 (MQ=255) ctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatga > 1:2644333‑M1/1‑88 (MQ=255) tGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgac > 1:2501141‑M1/1‑87 (MQ=255) acTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctg < 1:2019723‑M1/150‑68 (MQ=255) acTGGCGTTGAATTATTACCCGTAAAAATAAAGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCACTTCCAATCAGACCAGAGTCAGTACCAGTTCCTGCAAGGTGGAATTCGGTCACGGTAACATGACGCTg < 1:468441/150‑1 (MQ=255) cTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtaccagttcctgcaaggtggaattccgtcacggtaacatgacgctgg < 1:33507‑M1/150‑69 (MQ=255) ggCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCt > 1:2093553/1‑150 (MQ=255) ggCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaa < 1:2457761‑M1/150‑71 (MQ=255) gCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATTCACTTCCA‑‑‑CT‑‑‑CAGACCAGAGTCAGTGCCAGTTCCTGCAAGGTGGAATTCCGTCACGGTAACATGACGCTGaaaa < 1:1023697/150‑1 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:2033210‑M1/150‑74 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:1689645‑M1/150‑74 (MQ=255) tGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatcc < 1:1220697‑M1/150‑76 (MQ=255) gAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatcca > 1:1725791‑M1/1‑74 (MQ=255) aaTTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaccatgacgctggaaaatccat > 1:2262175‑M1/1‑73 (MQ=255) aaTTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccat > 1:881627‑M1/1‑73 (MQ=255) ttattaCCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCAGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACCACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCagag < 1:137749/150‑1 (MQ=255) tattaCCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAgc < 1:299864/150‑1 (MQ=255) attaCCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCa > 1:752680/1‑142 (MQ=255) attaCCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAgct > 1:3780569/1‑150 (MQ=255) attaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCAATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgcc > 1:3628133‑M1/1‑69 (MQ=255) taCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccag < 1:2237388‑M1/150‑84 (MQ=255) aCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccaga < 1:347551‑M1/150‑85 (MQ=255) ccTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagag > 1:2810616‑M1/1‑65 (MQ=255) ccTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagag > 1:528051‑M1/1‑65 (MQ=255) ctgtagaaataacgccgGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagc < 1:2790902‑M1/142‑87 (MQ=255) ctgtagaaataacgccgGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagc < 1:652581‑M1/142‑87 (MQ=255) ctgtagaaataacgccgGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagc > 1:2206419‑M1/9‑64 (MQ=255) gtagaaataacgcCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctg > 1:3074849‑M1/7‑62 (MQ=255) tagaaataacgCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgc > 1:3281389‑M1/6‑61 (MQ=255) aatAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcac < 1:1768144‑M1/149‑94 (MQ=255) aTAACGCCGGGTGAGTAGAAAGAACCTGTGGCGGCCATTGCGTCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgcgcacg < 1:3126228‑M1/150‑95 (MQ=255) tAACGCCGGATGAGTAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgg < 1:3650203‑M1/150‑96 (MQ=255) aaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgat < 1:2625755‑M1/150‑97 (MQ=255) aCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtg < 1:1190975‑M1/150‑98 (MQ=255) cGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgt > 1:2126657‑M1/1‑52 (MQ=255) cGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccttcgccagagc > 1:2972996‑M1/1‑52 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtgggattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:1140636‑M1/150‑100 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacgtgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:578842‑M1/150‑100 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgtt > 1:393059‑M1/1‑51 (MQ=255) cGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttga > 1:587969‑M1/1‑49 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatc < 1:61405‑M1/150‑104 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatc < 1:2916372‑M1/150‑104 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatc < 1:1470390‑M1/150‑104 (MQ=255) tGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccg > 1:3095657‑M1/1‑45 (MQ=255) tGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccg < 1:2534868‑M1/150‑106 (MQ=255) gAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccgt > 1:63203‑M1/1‑44 (MQ=255) agcagaaagAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagggtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgttaatccgcg < 1:435236‑M1/146‑108 (MQ=255) agcagaaagAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccgtg < 1:970217‑M1/146‑108 (MQ=255) gcagaaaGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgttaatccgcga > 1:2514303‑M1/4‑42 (MQ=255) cagaaAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccattgccagagctgctcacggtgttgatccgtgaa < 1:3170947‑M1/148‑110 (MQ=255) cagaaAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccgtgaa < 1:3025927‑M1/148‑110 (MQ=255) cagaaAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccgtgaa > 1:3531111‑M1/3‑41 (MQ=255) cGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGa < 1:2740120/142‑1 (MQ=255) gAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccgtgaact > 1:2425736‑M1/1‑39 (MQ=255) gAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgttaatccgcgaact > 1:2319841‑M1/1‑39 (MQ=255) aaaGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTggg < 1:1753920/150‑1 (MQ=255) aaaGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTggg < 1:3416044/150‑1 (MQ=255) | TGATAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTA‑‑‑‑‑‑TCCA‑‑‑CC‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATTTC > Xen14_126/1915‑2210 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |