| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Xen14_126 | 2,059 | 0 | T | G | 78.1% | 1680.5 / inf | 779 | A91A (GCT→GCG) | Xen14_04726 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (58/112); new base G (311/295); total (371/408) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.59e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 787 total aligned reads displayed.
GTCAATGATAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATT > Xen14_126/1910‑2208 | gATAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCCGCTCtt < 1:34379/150‑1 (MQ=255) tAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTAAATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTAc < 1:1417221/150‑1 (MQ=255) aTGGCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑c < 1:2991585/150‑1 (MQ=255) aTGGCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑c < 1:1609373/150‑1 (MQ=255) ggCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑ctt < 1:3337717/150‑3 (MQ=255) gCTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGTGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑cttc < 1:933392/150‑4 (MQ=255) cTCAGGCTCTGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑cttcc < 1:2875085/150‑5 (MQ=255) cTCAGGCTCTGGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑cttcc < 1:2313367/150‑5 (MQ=255) tcaggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑cttcca < 1:1037383/142‑6 (MQ=255) caggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑cttccac < 1:3579589/143‑7 (MQ=255) ggctctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑cttccactc > 1:1812784/6‑142 (MQ=255) cTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGactact < 1:435539/150‑1 (MQ=255) tctGGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑cttccactcaga > 1:1002077/3‑139 (MQ=255) ctGGCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑cttccactcagac < 1:1458343/149‑13 (MQ=255) ctGGCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑cttccactcagac < 1:3223667/149‑13 (MQ=255) ggCAGAACGAAGGGCGTGTTTCGCGGCGTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑cttccactcagacca < 1:2637917/150‑15 (MQ=255) ggCAGAACGAAGGGCATGTTTCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑cttccactcagacca > 1:273552/1‑136 (MQ=255) cAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACTGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGt > 1:3809016/1‑150 (MQ=255) cGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CATACTACTGTCAGTGCCAGCTCCTGc < 1:3372411/150‑1 (MQ=255) gcggcgTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGa < 1:2194625/150‑1 (MQ=255) gcggcgTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGACTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGa > 1:1231309/1‑150 (MQ=255) gcgTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggt > 1:2413517‑M1/1‑111 (MQ=255) cgTCTTCCGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtg < 1:3727885‑M1/150‑41 (MQ=255) cgTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtg < 1:2534006‑M1/150‑41 (MQ=255) cGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattcc > 1:844080‑M1/1‑103 (MQ=255) cGGTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattcc > 1:1396131‑M1/1‑103 (MQ=255) cGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACg < 1:2394776/150‑1 (MQ=255) cGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAAATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACg < 1:2567487/150‑1 (MQ=255) ggTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccg < 1:2347661‑M1/150‑49 (MQ=255) gTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgt > 1:1972222‑M1/1‑101 (MQ=255) gTAACGACCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgt > 1:124425‑M1/1‑101 (MQ=255) acgacctcTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcac < 1:1717698‑M1/147‑53 (MQ=255) cgacctCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacg > 1:943934‑M1/3‑97 (MQ=255) caacCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCATAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cctccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacg > 1:3677322‑M1/1‑97 (MQ=255) gaccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg < 1:2065867‑M1/149‑55 (MQ=255) gaccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg < 1:2705407‑M1/149‑55 (MQ=255) acCTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCGTTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggt < 1:3275411‑M1/150‑56 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:1869505‑M1/1‑94 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:3472967‑M1/1‑94 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:1939384‑M1/1‑94 (MQ=255) ccTCTTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggta > 1:68919‑M1/1‑94 (MQ=255) ctctTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaa > 1:796320‑M1/1‑93 (MQ=255) ctctTCTGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaa > 1:2680737‑M1/1‑93 (MQ=255) tcttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaac < 1:2553080‑M1/150‑59 (MQ=255) tcttctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaac > 1:2018576‑M1/1‑92 (MQ=255) tctGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcaatgccagttcctgcaaggtggaattccgtcacggtaacatg > 1:3115763‑M1/1‑89 (MQ=255) tGACACTGGCGTTGAATTATTACCTTTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgac < 1:3303359‑M1/150‑64 (MQ=255) tGACACTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgac < 1:131151‑M1/150‑64 (MQ=255) gACACTGGCGTTGAATTATTACCTGTGGAGATAAAGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGaa < 1:2511124/150‑1 (MQ=255) acacTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTTGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgc < 1:364772‑M1/150‑66 (MQ=255) acacTGGCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgc < 1:3153210‑M1/150‑66 (MQ=255) cacTGGCGTTGAATTATTACCCGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgct > 1:2785644‑M1/1‑84 (MQ=255) acTGGCGTTGAATTATTACCCGTAAAAATAAAGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCACTTC‑‑‑‑‑CAATCAGACCAGAGTCAGTACCAGTTCCTGCAAGGTGGAATTCGGTCACGGTAACATGACGCTg < 1:468441/150‑1 (MQ=255) cTGGCGGTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑CTTCCACT‑‑CAGACCAGAGTCAGTGCCAGTTCCTGAAAGGTGGAATTCCGTCACGGTAACATGACGCTgg < 1:225401/150‑1 (MQ=255) ggCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCt > 1:2093552/1‑150 (MQ=255) ggCGTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacgg > 1:3082174‑M1/1‑80 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGGGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:2468109‑M1/150‑74 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:2033210‑M1/150‑74 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:3012510‑M1/150‑74 (MQ=255) gTTGAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaat < 1:2453651‑M1/150‑74 (MQ=255) gAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatcca < 1:341303‑M1/150‑77 (MQ=255) gAATTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatcca < 1:2120632‑M1/150‑77 (MQ=255) aaTTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccat > 1:2608260‑M1/1‑73 (MQ=255) aaTTATTACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccat > 1:881627‑M1/1‑73 (MQ=255) attattACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatc < 1:2908562‑M1/150‑79 (MQ=255) attattACCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatc > 1:3526269‑M1/1‑72 (MQ=255) ttattaCCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCagag > 1:2757008/1‑150 (MQ=255) ttattaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagctcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcg < 1:2968037‑M1/150‑80 (MQ=255) ttattaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcg > 1:2236381‑M1/1‑71 (MQ=255) attaCCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCa > 1:752680/1‑142 (MQ=255) attaCCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAgct > 1:3780569/1‑150 (MQ=255) attaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgcc > 1:1081014‑M1/1‑69 (MQ=255) attaCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgcc > 1:1369479‑M1/1‑69 (MQ=255) taCCTGTAGAAATAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccag > 1:1131325‑M1/1‑67 (MQ=255) ctgtagaaataacgccgGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagc < 1:652581‑M1/142‑87 (MQ=255) tgtgGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACAt < 1:236842/117‑1 (MQ=255) gtagaaataacgcCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctg > 1:306017‑M1/7‑62 (MQ=255) gaaataaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctc > 1:1629912‑M1/4‑59 (MQ=255) agaTAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCTAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGgtgt < 1:1272100/150‑1 (MQ=255) aaataACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctca > 1:1540947‑M1/3‑58 (MQ=255) tAACGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcataccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgg < 1:3613071‑M1/150‑96 (MQ=255) aaCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggt < 1:176367‑M1/150‑97 (MQ=255) aCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtg < 1:1190973‑M1/150‑98 (MQ=255) aCGCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtg < 1:1578132‑M1/150‑98 (MQ=255) gCCGGGTGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:317880‑M1/150‑100 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacgtgacgctggaaaatccatcgccagagctgctcacggtgtt < 1:578842‑M1/150‑100 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcatggtgtt < 1:541349‑M1/150‑100 (MQ=255) gCCGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgcaagagctgctcacggtgtt > 1:393062‑M1/1‑51 (MQ=255) cGGATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttga > 1:587969‑M1/1‑49 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatc < 1:61405‑M1/150‑104 (MQ=255) gATGAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttg < 1:1208840‑M1/147‑101 (MQ=255) aTGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAAc > 1:2800343/1‑150 (MQ=255) gAGCAGAAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgttaatccgc < 1:1516600‑M1/150‑107 (MQ=255) gAGCAGAAAGAACCTGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccgt > 1:63203‑M1/1‑44 (MQ=255) agcagaaagAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacggtgttgatccgtg < 1:970217‑M1/146‑108 (MQ=255) agcagaaagAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgttaatccgcg < 1:1684554‑M1/146‑108 (MQ=255) agaAAGAACCTGTGGCGGCCATTGCGCCGTCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaattccgtcacggtaacatgacgctggaaaatccatcgccagagctgctcacgatgttaatccgcgaac < 1:1018036‑M1/149‑111 (MQ=255) agaAAGAACCGGTGGCGGCCATTGCGCCATCTTTATCCA‑‑‑Cttccactcagaccagagtcagtgccagttcctgcaaggtggaatttcgtcacggtaacatgacgctggaaaatccagcgccagagctgctcacggtgttgat < 1:3548588‑M1/141‑103 (MQ=255) gAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTgg > 1:2844860/1‑150 (MQ=255) aaaGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTggg < 1:1753919/150‑1 (MQ=255) | GTCAATGATAATGTTATTTTCAAATGGCTCAGACTTTGGCAAAACGAAGGGCGTATATCGCGGCGTCTTTCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAGATAACGCCGGATGAGCCGAAAGAACCGGTGGCTGCTCTTACTCCGTCTTTATCCA‑‑‑C‑‑‑‑‑C‑‑‑CAGACTACTGTCAGTGCCAGCTCCTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACGGTGTTGATCCGCGAACTGAGTGGGAGGGGAAGATGATT > Xen14_126/1910‑2208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |