| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_21 | = 75 | NA (NA) | 19 (0.370) +AAATATGGCGGTGAGGGGGGGAT |
14/250 | 2.6 | 100% | intergenic (–/+2) | –/add | –/Adenosine deaminase |
| ? | Xen14_93 | = 7777 | 0 (0.000) | intergenic (‑302/–) | ghrA/– | Glyoxylate/hydroxypyruvate reductase A/– | |||||
TTAAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_93/7632‑7777 | ttAAAAAAGTTTTTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcc > 1:2972149‑M2/1‑146 (MQ=255)ttAAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAattc < 1:1044908‑M2/150‑5 (MQ=255) aaaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCATGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcccc < 1:1518852‑M2/150‑7 (MQ=255) aaaaaGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccc < 1:1768118‑M2/150‑8 (MQ=255) gACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccat > 1:1050766‑M2/1‑131 (MQ=255) tGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaat < 1:2813293‑M2/150‑32 (MQ=255) tttCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatc < 1:1808824‑M2/150‑35 (MQ=255) tttCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatc < 1:1808825‑M2/150‑35 (MQ=255) tCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcct < 1:1472181‑M2/150‑37 (MQ=255) cGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggagg < 1:113841‑M2/150‑53 (MQ=255) cGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggagg > 1:1595598‑M2/1‑98 (MQ=255) cAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggttttt < 1:3416667‑M2/150‑58 (MQ=255) cAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTAGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttc < 1:2800611‑M2/150‑58 (MQ=255) cAAGAAAGGAACGACAATTTGTTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaa > 1:778122‑M2/1‑90 (MQ=255) cAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcg > 1:581591‑M2/1‑85 (MQ=255) aaCGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgccta < 1:1902794‑M2/150‑70 (MQ=255) gACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatcccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataag < 1:2152637‑M2/150‑73 (MQ=255) tGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttacataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctc < 1:692463‑M2/150‑80 (MQ=255) tGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcacatgcgcatataaggctctc < 1:692465‑M2/150‑80 (MQ=255) tGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagacggaggtttttcaaatgcgcctataaggctctc < 1:692464‑M2/150‑80 (MQ=255) gTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctctt > 1:673985‑M2/1‑69 (MQ=255) gTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctctt > 1:673986‑M2/1‑69 (MQ=255) ccGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttaccagccgc < 1:1877813‑M2/150‑91 (MQ=255) aGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAatccccccctcaccgccatatttaaataaatatcctccggcatagccggaggtttttcaaatgcgcctataaggctctcttaccagccgcgcc > 1:285626‑M2/1‑57 (MQ=255) | TTAAAAAAGTTTGTTGACCTCAGGTCATGATTTCCCTAAATTAGCGCCCGTTCCAGCAAGACAGGAACGACAATTTGGTGAGGTGTCCGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_93/7632‑7777 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |