New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_171 1 =0 (0.000)73 (0.810) 40/294 0.4 67.6% intergenic (–/+60) –/Xen14_04776 –/hypothetical protein
?Xen14_64 = 2419 70 (1.090)coding (62/699 nt) Xen14_04183 hypothetical protein

Only 100 of 165 total aligned reads displayed.

TGCCGTTCAGTTCAAATCCTGTCCCCTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCGACCATTTACGACAAACC  >  Xen14_64/2270‑2568
                                                                                                                                                     |                                                                                                                                                     
tGCCGTTCAGTTCAAATCCTGTCCCCTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGcacca                                                                                                                                                       >  1:2506623/1‑150 (MQ=255)
    gttcagttcaAATCCTGTCCCCTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTg                                                                                                                                                   >  1:3334552/1‑150 (MQ=255)
        agttcaAATCCTGTCCCCTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGct                                                                                                                                               <  1:2959114/150‑1 (MQ=255)
                 ccTGTCCCCTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACtgagtg                                                                                                                                      >  1:3714867/1‑150 (MQ=255)
                     tCCCCTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGc                                                                                                                                  <  1:2281994/150‑1 (MQ=255)
                      ccccTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGATGCg                                                                                                                                 >  1:3542301/1‑150 (MQ=255)
                       cccTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCgt                                                                                                                                >  1:2146875/1‑150 (MQ=255)
                                  gTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCatg                                                                                                                     >  1:160104/1‑150 (MQ=255)
                                    aTGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCatgat                                                                                                                   >  1:849647/1‑150 (MQ=255)
                                                  cgccCCTGCCAGGTAGCCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGCGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGa                                                                                                     >  1:298393/1‑150 (MQ=255)
                                                    ccccTGCTAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAACTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAat                                                                                                   >  1:3738902/1‑150 (MQ=255)
                                                              gTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATc                                                                                         <  1:397956/150‑1 (MQ=255)
                                                                  ccGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCagag                                                                                     >  1:649661/1‑150 (MQ=255)
                                                                      cTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGcctc                                                                                 >  1:3786616/1‑150 (MQ=255)
                                                                             ttttCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCACATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGcc                                                                          <  1:2695240/150‑1 (MQ=255)
                                                                                tCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCANCAGAGCCTCCTATGCCACg                                                                       <  1:3637759/150‑1 (MQ=255)
                                                                                  gTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGAc                                                                     >  1:298878/1‑150 (MQ=255)
                                                                                  gTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTATCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGAc                                                                     >  1:184419/1‑150 (MQ=255)
                                                                                     cTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTg                                                                  <  1:2050936/150‑1 (MQ=255)
                                                                                      tGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGt                                                                 <  1:2441601/150‑1 (MQ=255)
                                                                                       gCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGtt                                                                >  1:3440431/1‑150 (MQ=255)
                                                                                         tCATTACAGAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgc                                                              <  1:3648416‑M2/150‑90 (MQ=255)
                                                                                             tACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAAt                                                          <  1:262264/150‑1 (MQ=255)
                                                                                              aCAGAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCATAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaattctgcgctgaac                                                         >  1:1858003‑M2/1‑56 (MQ=255)
                                                                                              aCAGAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaattctgcgctgaac                                                         >  1:1858007‑M2/1‑56 (MQ=255)
                                                                                              aCAGAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaac                                                         >  1:825880‑M2/1‑56 (MQ=255)
                                                                                              aCAGAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaac                                                         >  1:2358298‑M2/1‑56 (MQ=255)
                                                                                               cAGAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaact                                                        >  1:3435347‑M2/1‑55 (MQ=255)
                                                                                                aGAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactc                                                       >  1:1014901‑M2/1‑54 (MQ=255)
                                                                                                aGAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactc                                                       >  1:1014900‑M2/1‑54 (MQ=255)
                                                                                                aGAAAAAATAACGTTCACCACCGACCTCTGTCAGTTCGATTTCCCAGAGCACCAACTGGGCTGACTGAGTGAGGCGTATCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTg                                                       >  1:3352253/1‑150 (MQ=255)
                                                                                                 gAAAAAATAACGTTCTCCACCGACCTCTGTCAGGTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactca                                                      <  1:1728800‑M2/150‑98 (MQ=255)
                                                                                                 gAAAAAATAACGTTCTCCACCGACCTCTGTCAGGTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaac                                                         <  1:161812‑M2/147‑95 (MQ=255)
                                                                                                 gAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactca                                                      >  1:2442820‑M2/1‑53 (MQ=255)
                                                                                                 gAAAAAATAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactca                                                      >  1:2442817‑M2/1‑53 (MQ=255)
                                                                                                 gAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGc                                                      >  1:318938/1‑150 (MQ=255)
                                                                                                  aaaaaaTAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaa                                                     >  1:3110696‑M2/1‑52 (MQ=255)
                                                                                                  aaaaaaTAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaa                                                     >  1:1181170‑M2/1‑52 (MQ=255)
                                                                                                   aaaaaTAACGTTCTCCACCGACCTCTGTCAGGTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaac                                                    <  1:3114718‑M2/150‑100 (MQ=255)
                                                                                                       aTAACGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgc                                                <  1:3040210‑M2/150‑104 (MQ=255)
                                                                                                          aCGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcccgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaac                                             <  1:2582411‑M2/150‑107 (MQ=255)
                                                                                                          aCGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgttccctgccggatatcccgcatcagttcaccacctgtctaaactctgcgctgaactcaacacgcaac                                             <  1:2582409‑M2/150‑107 (MQ=255)
                                                                                                           cGTTCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaaca                                            <  1:270965‑M2/150‑108 (MQ=255)
                                                                                                           cGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCATCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGtt                                            >  1:1020940/1‑150 (MQ=255)
                                                                                                            gTTCTCCACCGACCTCTGTCAGGTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcagcat                                           <  1:940956‑M2/150‑109 (MQ=255)
                                                                                                            gTTCTCCACCGACCTCTGTCAGGTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcagcat                                           <  1:940954‑M2/150‑109 (MQ=255)
                                                                                                            gTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTa                                           >  1:1665016/1‑150 (MQ=255)
                                                                                                            gTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTa                                           >  1:3594132/1‑150 (MQ=255)
                                                                                                             ttCTCCACCGACCTCTGTCAGGTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcagcata                                          <  1:1837201‑M2/150‑110 (MQ=255)
                                                                                                             ttCTCCACCGACCTCTGTCAGGTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcagcata                                          <  1:1837198‑M2/150‑110 (MQ=255)
                                                                                                             ttCTCCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgc                                                              >  1:91139‑M2/1‑41 (MQ=255)
                                                                                                             ttCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTAc                                          <  1:1572737/150‑1 (MQ=255)
                                                                                                             ttCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTAc                                          <  1:1572736/150‑1 (MQ=255)
                                                                                                               caccacCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTTAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTAccc                                        <  1:2263519/150‑1 (MQ=255)
                                                                                                                 ccaccGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgtcggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacatgcaacatactga                                      <  1:3735521‑M2/150‑114 (MQ=255)
                                                                                                                 ccaccGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactga                                      >  1:1914056‑M2/1‑37 (MQ=255)
                                                                                                                 ccaccGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCcac                                      >  1:2912800/1‑150 (MQ=255)
                                                                                                                  caccGACCTCTGTCAGGTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcagcatactgac                                     <  1:1709935‑M2/150‑115 (MQ=255)
                                                                                                                  caccGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgac                                     <  1:2269510‑M2/150‑115 (MQ=255)
                                                                                                                  caccGACCTCTGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaa                                                                      >  1:1820167‑M2/1‑36 (MQ=255)
                                                                                                                   accGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAg                                    <  1:2340248/150‑1 (MQ=255)
                                                                                                                         ctctGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgac                              >  1:2822115‑M2/1‑29 (MQ=255)
                                                                                                                          tctGTCAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacg                             <  1:2224623‑M2/150‑123 (MQ=255)
                                                                                                                          tctGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGccccc                             <  1:53079/150‑1 (MQ=255)
                                                                                                                            tGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCAc                           <  1:1858315/150‑1 (MQ=255)
                                                                                                                               cAGATCGATTTCCCCGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccat                        <  1:1552164‑M2/150‑128 (MQ=255)
                                                                                                                               cAGATCGATTTCCCAGAGCACCAcgctggccgactgcttcgcacgggtgcatccattcagtgtttcctgccggatatcctgcatcagttcgccacctgtttaaaccctgcgctgaactcaacacgcaacatactgatctgcgacgaccat                        <  1:2087739‑M2/150‑128 (MQ=255)
                                                                                                                               cAGATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccat                        <  1:2667204‑M2/150‑128 (MQ=255)
                                                                                                                                aGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATACCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCtt                       >  1:3049082/1‑150 (MQ=255)
                                                                                                                                 ggtcgATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcagcatactgacccgcgacgaccattt                      <  1:1396310‑M2/148‑130 (MQ=255)
                                                                                                                                 gATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattt                      <  1:1978323‑M2/150‑130 (MQ=255)
                                                                                                                                 gATCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattt                      <  1:1978324‑M2/150‑130 (MQ=255)
                                                                                                                                  aTCGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatccagcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccatttt                     >  1:3578059‑M2/1‑20 (MQ=255)
                                                                                                                                   tCGATTTCCCAGAGCACCAcgctggccgactgccccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttg                    >  1:2858370‑M2/1‑19 (MQ=255)
                                                                                                                                    cGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgc                   <  1:3135293‑M2/150‑133 (MQ=255)
                                                                                                                                    cGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgc                   <  1:174402‑M2/150‑133 (MQ=255)
                                                                                                                                    cGATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgac                           >  1:3748623‑M2/1‑18 (MQ=255)
                                                                                                                                    cGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCg                   >  1:588924/1‑150 (MQ=255)
                                                                                                                                    cGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCg                   <  1:2886603/150‑1 (MQ=255)
                                                                                                                                     gATTTCCCAGAGCACCAcgctggcctactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacttgcgacgaccattttgcg                  >  1:332496‑M2/1‑17 (MQ=255)
                                                                                                                                     gATTTCCCAGAGCACCAcgctggcctactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacttgcgacgaccattttgcg                  >  1:2641414‑M2/1‑17 (MQ=255)
                                                                                                                                     gATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaac                                                    >  1:3259966‑M2/1‑17 (MQ=255)
                                                                                                                                     gATTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcagcat                                           >  1:3832786‑M2/1‑17 (MQ=255)
                                                                                                                                      aTTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgc                 <  1:1107488‑M2/150‑135 (MQ=255)
                                                                                                                                      aTTTCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgc                 <  1:3146948‑M2/150‑135 (MQ=255)
                                                                                                                                       tttCCCAGAGCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcaccagttcaccacctgtttaaactctacgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgca                >  1:3711920‑M2/1‑15 (MQ=255)
                                                                                                                                       tttCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCGAcc                <  1:436611/150‑1 (MQ=255)
                                                                                                                                        ttCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTNCATCAGAGCCTCCTATGCCACGACCCGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCGACNa               <  1:3571150/150‑1 (MQ=255)
                                                                                                                                          cccAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCGACCAtt             >  1:252034/1‑150 (MQ=255)
                                                                                                                                              gagCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttagactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgcaggtcacc         >  1:1448716‑M2/1‑8 (MQ=255)
                                                                                                                                               agCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgcaggtcacct        <  1:2190441‑M2/150‑144 (MQ=255)
                                                                                                                                               agCACCAcgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgcaggtcacct        <  1:2190442‑M2/150‑144 (MQ=255)
                                                                                                                                                  accacgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgcaggtcaccttta     <  1:2374347‑M2/150‑147 (MQ=255)
                                                                                                                                                  accacgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacgcgcagcatactgacccgcgacgaccattttgcgcaggtcaccttta     >  1:3042060‑M2/1‑4 (MQ=255)
                                                                                                                                                  accacgctggccgactgctccgcacgggtgcattcattcagtgtttcatgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgcaggtcaccttta     >  1:293834‑M2/1‑4 (MQ=255)
                                                                                                                                                  accacgctggccgactgctccgcacgggtgcattcattcagtgtttcatgccggatatcctgcatcagttcaccacctgttcaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgcaggtcaccttta     >  1:293833‑M2/1‑4 (MQ=255)
                                                                                                                                                   ccacgctggccgactgctccgcacgggtgcattcattcagtgtttcctgccggatatcctgcatcagttcaccacctgtttaaactctgcgctgaactcaacacgcaacatactgacctgcgacgaccattttgcgcaggtcacctttat    >  1:26094‑M2/1‑3 (MQ=255)
                                                                                                                                                   ccaccTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCGACCATTTACGACaaa    >  1:885368/1‑150 (MQ=255)
                                                                                                                                                    caccTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCGACCATTTACGACAAac   <  1:2144347/150‑1 (MQ=255)
                                                                                                                                                     accTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCGACCATTTACGACAAacc  <  1:1573678/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
TGCCGTTCAGTTCAAATCCTGTCCCCTGAATGGGGTATGCCTGATACTGCCGCCCCTGCCAGGTAACCGGCTCACCTTTTTCGTTCTGCTCATTACAGAAAAAATAACGTTCACCACCGACCTCTGTCAGATCGATTTCCCAGAGCACCACCTGGGCTGACTGAGTGAGGCGTGTCGTCTCATGATGTGTTTCCTGTGGAATATCCTGCATCAGAGCCTCCTATGCCACGACCTGTTCAAAATCTGCCGTTATGGTTACCCACAGCGCCCCCACGCTTGCCGACCATTTACGACAAACC  >  Xen14_64/2270‑2568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.