| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_168 | 1 = | 0 (0.000) | 46 (0.080) | 28/242 | 1.9 | 100% | intergenic (–/+59) | –/Xen14_04774 | –/IS200/IS605 family transposase IS200C |
| ? | Xen14_67 | 28 = | 0 (0.000) | intergenic (–/‑63) | –/gltJ | –/Glutamate/aspartate import permease protein GltJ | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTGGA > Xen14_67/1‑169 | attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCt > 1:217487‑M2/99‑150 (MQ=255)attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCt > 1:217486‑M2/99‑150 (MQ=255)attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCt > 1:217485‑M2/99‑150 (MQ=255)attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCt > 1:217483‑M2/99‑150 (MQ=255)attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCt > 1:217482‑M2/99‑150 (MQ=255)attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCt > 1:217481‑M2/99‑150 (MQ=255)attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCt > 1:217478‑M2/99‑150 (MQ=255)attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCt > 1:217479‑M2/99‑150 (MQ=255)attccctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTCATAGGCGCATTTGAAAAACCTCCTGCTATGCCGGAGGATATTTATTCt < 1:3620035‑M2/52‑1 (MQ=255) ttcctatccgggcagcccgtttacgggccataagtaacgaagttggatgcaaatgtcaggtcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTgg < 1:3711528‑M2/54‑1 (MQ=255) cctgtcctggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcaggtcgtgtgcgtctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAg < 1:583672‑M2/56‑1 (MQ=255) cctatccgggcagcccgtttacgggccgtaagtaacgaagttggatgcaaacgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCGGGAg < 1:415520‑M2/56‑1 (MQ=255) gggcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGAttt > 1:3047320‑M2/88‑150 (MQ=255) gcagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTAt < 1:14387‑M2/65‑1 (MQ=255) cagcccgtttacgtgccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATg < 1:769079‑M2/66‑1 (MQ=255) cagcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATg < 1:769080‑M2/66‑1 (MQ=255) agcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcccctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGt > 1:1504558‑M2/84‑150 (MQ=255) gcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTc > 1:2784296‑M2/83‑150 (MQ=255) gcccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTc > 1:2784290‑M2/83‑150 (MQ=255) cccgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCt < 1:1625179‑M2/69‑1 (MQ=255) cgtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCAGGAGGATATTTATTCTGGAGTAGATTTATGTCtat > 1:63574‑M2/80‑150 (MQ=255) gtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCtata < 1:2329335‑M2/72‑1 (MQ=255) gtttacgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCtata < 1:2329330‑M2/72‑1 (MQ=255) acgggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACt > 1:3496215‑M2/75‑150 (MQ=255) cgggccgtaagtaatgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTg < 1:3339921‑M2/77‑1 (MQ=255) ggccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGa > 1:1295356‑M2/72‑150 (MQ=255) ccgtaagtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAAc < 1:2722730‑M2/81‑1 (MQ=255) agtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTgggg < 1:455165‑M2/86‑1 (MQ=255) agtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTgggg < 1:3538869‑M2/86‑1 (MQ=255) gtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGt > 1:2824117‑M2/64‑150 (MQ=255) gtaacgaagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCATTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGt > 1:2295354‑M2/64‑150 (MQ=255) gaagttggatacaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTAtttt < 1:2797314‑M2/92‑1 (MQ=255) aagttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTAttttt < 1:919‑M2/93‑1 (MQ=255) agttggatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTAtttttt < 1:2768364‑M2/94‑1 (MQ=255) agttggatgcaaaggtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTAtttttt < 1:1208987‑M2/94‑1 (MQ=255) gttggatgcaaatgtcggatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATATGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTAttttttt < 1:3616697‑M2/95‑1 (MQ=255) gatgcaaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTacaa > 1:2360201‑M2/52‑150 (MQ=255) caaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAg > 1:194821‑M2/48‑150 (MQ=255) caaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAg > 1:70670‑M2/48‑150 (MQ=255) caaatgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAg > 1:70673‑M2/48‑150 (MQ=255) tgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGcccc > 1:3360479‑M2/44‑150 (MQ=255) tgtcagatcgtgtgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGcccc > 1:862581‑M2/44‑150 (MQ=255) tgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAacac > 1:284430‑M2/32‑150 (MQ=255) tgcgcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTACGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAacac > 1:342639‑M2/32‑150 (MQ=255) cgcctgtcagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGc > 1:2539283‑M2/30‑143 (MQ=255) gcctgttagggcgcggctggtaagagagCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAAcaccac > 1:3685988‑M2/29‑150 (MQ=255) ggCGCGGCTGGTAGGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCttgg > 1:2864837/1‑150 (MQ=255) gcgcGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCttggt > 1:1252444/1‑150 (MQ=255) gcgGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCTGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCttggttg < 1:927187/150‑1 (MQ=255) cgGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTCTGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCttggttgg > 1:2968412/1‑150 (MQ=255) gTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTgg > 1:843899/1‑150 (MQ=255) tAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCATCTATCTTGGTTGGATCTGGa > 1:1743502/1‑150 (MQ=255) tAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTGGa > 1:215087/1‑150 (MQ=255) tAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTGGa > 1:215086/1‑150 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATTTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTCTGGAGTAGATTTATGTCTATAGACTGGAACTGGGGTATTTTTTTACAACAAGCCCCGTTCGGCAACACCACCTATCTTGGTTGGATCTGGA > Xen14_67/1‑169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |