| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_168 | 1 = | 0 (0.000) | 38 (0.060) | 26/242 | 2.9 | 100% | intergenic (–/+59) | –/Xen14_04774 | –/IS200/IS605 family transposase IS200C |
| ? | Xen14_46 | = 40324 | 0 (0.000) | intergenic (‑92/–) | Xen14_03701/– | hypothetical protein/– | |||||
ATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GG > Xen14_46/40180‑40351 | aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc < 1:866523/150‑1 (MQ=255)aTCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctc < 1:579847/150‑1 (MQ=255) tCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctct > 1:506888/1‑150 (MQ=255) tCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctct > 1:506889/1‑150 (MQ=255) cAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCtt < 1:2617220/150‑1 (MQ=255) tCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCGAATGCGCCTATAAGGCTCTCTTACCa > 1:1168575/1‑150 (MQ=255) tCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCGAATGCGCCTATAAGGCTCTCTTACCa > 1:1168579/1‑150 (MQ=255) aGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTACTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGcc < 1:2534081/150‑1 (MQ=255) aGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTACTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGcc < 1:2534080/150‑1 (MQ=255) aGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTACTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGcc < 1:2534082/150‑1 (MQ=255) aGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTACTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGcc < 1:305062/150‑1 (MQ=255) gCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAGCCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCcg > 1:1986290/1‑150 (MQ=255) gCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAGCCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCcg > 1:1986291/1‑150 (MQ=255) gCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCcg > 1:679549/1‑150 (MQ=255) gCTTTCGAGAGCCTCCATTCCCTATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACa < 1:922714/150‑1 (MQ=255) gCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACa > 1:910945/1‑150 (MQ=255) ttCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccggccgcgccctaacaggc < 1:2198936‑M2/150‑29 (MQ=255) gCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacg < 1:290539‑M2/150‑36 (MQ=255) gCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacg < 1:1961076‑M2/150‑36 (MQ=255) ccTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacga < 1:2078949‑M2/150‑37 (MQ=255) tCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatc < 1:122438‑M2/150‑39 (MQ=255) tCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatc < 1:122437‑M2/150‑39 (MQ=255) tCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatc < 1:122436‑M2/150‑39 (MQ=255) cATTCCCCATGAACCCATTTTGTATCTCTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctg > 1:1007723‑M2/1‑110 (MQ=255) cATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctg < 1:868714‑M2/150‑41 (MQ=255) cATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctg > 1:978647‑M2/1‑110 (MQ=255) cATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctg > 1:978648‑M2/1‑110 (MQ=255) cATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctg > 1:978649‑M2/1‑110 (MQ=255) cATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctg > 1:2854448‑M2/1‑110 (MQ=255) ttCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgac > 1:2099278‑M2/1‑108 (MQ=255) ttCCCCATGAACCCATGTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgac > 1:2099277‑M2/1‑108 (MQ=255) tCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgaca > 1:40023‑M2/1‑107 (MQ=255) aCCCATTTTGTGTCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatcc < 1:3305424‑M2/150‑53 (MQ=255) aCCCATTTTGTGTCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatcc < 1:3504063‑M2/150‑53 (MQ=255) cccATTTTGTATCCTTACCTGTTCTTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCATATAAGGctctcttaccagccgctccctaacaggcgcacacgatctgacatttgcatcca < 1:635688‑M2/150‑54 (MQ=255) cccATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgctccctaacaggcgcacacgatctgacatttgcatcca < 1:635692‑M2/150‑54 (MQ=255) cATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaac < 1:2909212‑M2/150‑56 (MQ=255) aTTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaact > 1:3034864‑M2/1‑94 (MQ=255) aTTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaact < 1:2254570‑M2/150‑57 (MQ=255) ccTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttactt > 1:1549267‑M2/1‑85 (MQ=255) tGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggccc < 1:383051‑M2/150‑73 (MQ=255) tGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggccc > 1:2830050‑M2/1‑78 (MQ=255) tGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgtt > 1:1743608‑M2/1‑78 (MQ=255) tGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACa < 1:2728788/103‑1 (MQ=255) aTTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaa < 1:2244092‑M2/150‑77 (MQ=255) tCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacg < 1:760971‑M2/150‑80 (MQ=255) gtaggcgaaatAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcgtaccagccgcgccctaacaggcgcacacgatctgacagttgcatccaacttcgttacttacggc > 1:3248094‑M2/6‑71 (MQ=255) gTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttactcacggcccgtaaacgggc > 1:2345258‑M2/1‑68 (MQ=255) aaTAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgccc > 1:814135‑M2/1‑63 (MQ=255) aTAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccg > 1:1027021‑M2/1‑62 (MQ=255) gTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggat < 1:787304‑M2/150‑92 (MQ=255) tattCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggataggg > 1:3319309‑M2/1‑55 (MQ=255) ttCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctcttaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaa < 1:2613323‑M2/150‑98 (MQ=255) ttCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGctctctcaccagccgcgccctaacaggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaa < 1:3697109‑M2/150‑98 (MQ=255) ttCAATAAATATCCTCCGGCATAGCAGGAGGTTTTTCAAATGCGCCTATAAGGctctattaccagccgcgccctaacaggcgcacacgatctgacatttgcatccgacttcgttaatgacggcccgtaaacgggctgccaggatggggaa < 1:2613326‑M2/150‑98 (MQ=255) | ATCAAATCCAGCCCTTCGTCGCTTTCGAGAGCCTCCATTCCCCATGAACCCATTTTGTATCCTTACCTGTTATTTCAGTCGAAATAGTATTATTCAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GG > Xen14_46/40180‑40351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |