New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_160 1 =0 (0.000)68 (0.450) 52/284 0.6 100% intergenic (–/‑16) –/Xen14_04770 –/hypothetical protein
?Xen14_189 = 447 0 (0.000)intergenic (–/–) –/– –/–

ATTGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T  >  Xen14_189/298‑453
                                                                                                                                                     |                                                                                                                                                 
attGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAt                                                                                                                                                   >  1:3242125/1‑150 (MQ=255)
attGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAt                                                                                                                                                   >  1:347170/1‑150 (MQ=255)
attGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCAGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAt                                                                                                                                                   >  1:2522248/1‑150 (MQ=255)
    aGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAttttt                                                                                                                                               >  1:2507409/1‑150 (MQ=255)
    aGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAttttt                                                                                                                                               >  1:2507410/1‑150 (MQ=255)
    aGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAAAAttttt                                                                                                                                               >  1:2507406/1‑150 (MQ=255)
     gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                              >  1:3062681/1‑150 (MQ=255)
     gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                              >  1:1622800/1‑150 (MQ=255)
     gTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                              >  1:1700776/1‑150 (MQ=255)
     attttCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACAtttttt                                                                                                                                              >  1:2343365/2‑150 (MQ=255)
        ttCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttg                                                                                                                                           >  1:1628890‑M2/1‑142 (MQ=255)
           tataTTGAGACAGAAGATTCAGGTACCTCTTTTGCTATTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgaga                                                                                                                                        >  1:2992310‑M2/1‑139 (MQ=255)
           tataTTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgaga                                                                                                                                        <  1:3491442‑M2/150‑12 (MQ=255)
              atTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattg                                                                                                                                     <  1:1586478‑M2/150‑15 (MQ=255)
               ttGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgt                                                                                                                                    >  1:1908308‑M2/1‑135 (MQ=255)
                      agaagaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgatt                                                                                                                             >  1:3307324‑M2/1‑128 (MQ=255)
                      agaagaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgatt                                                                                                                             >  1:3307323‑M2/1‑128 (MQ=255)
                          gaTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgctt                                                                                                                         <  1:646732‑M2/150‑27 (MQ=255)
                           aTTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttt                                                                                                                        <  1:2247072‑M2/150‑28 (MQ=255)
                                  tACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAGTTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggca                                                                                                                 <  1:2637498‑M2/150‑35 (MQ=255)
                                      tctTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatt                                                                                                             <  1:3758807‑M2/150‑39 (MQ=255)
                                          ttGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttg                                                                                                         >  1:2365622‑M2/1‑108 (MQ=255)
                                                 tGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttt                                                                                                  >  1:1520865‑M2/1‑101 (MQ=255)
                                                  gTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggctttttt                                                                                                 >  1:3368756‑M2/1‑100 (MQ=255)
                                                    cagcagCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagatagtgatgattgcttttgtggcatatttttggcttttttca                                                                                               >  1:744443‑M2/1‑98 (MQ=255)
                                                    cagcagCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagatagtgatgattgcttttgtggcatatttttggcttttttca                                                                                               >  1:744445‑M2/1‑98 (MQ=255)
                                                     agcagcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcat                                                                                              >  1:1653547‑M2/1‑97 (MQ=255)
                                                     agcagcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGCATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcat                                                                                              >  1:3247433‑M2/1‑97 (MQ=255)
                                                       cagcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcattt                                                                                            <  1:3750999‑M2/150‑56 (MQ=255)
                                                        agcGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttc                                                                                           >  1:895689‑M2/1‑94 (MQ=255)
                                                          cGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctg                                                                                         <  1:2355369‑M2/150‑59 (MQ=255)
                                                          cGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatctttggcttttttcatttctg                                                                                         <  1:3066904‑M2/150‑59 (MQ=255)
                                                             ttGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgaca                                                                                      <  1:3040806‑M2/150‑62 (MQ=255)
                                                              tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                     >  1:2345054‑M2/1‑88 (MQ=255)
                                                              tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                     >  1:2345051‑M2/1‑88 (MQ=255)
                                                              tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                     >  1:2799193‑M2/1‑88 (MQ=255)
                                                              tGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacag                                                                                     >  1:599596‑M2/1‑88 (MQ=255)
                                                                    ggCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatatt                                                                               <  1:3518975‑M2/150‑69 (MQ=255)
                                                                    ggCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatatt                                                                               >  1:1272795‑M2/1‑82 (MQ=255)
                                                                          tACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaac                                                                         >  1:592520‑M2/1‑76 (MQ=255)
                                                                          tACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaac                                                                         >  1:592524‑M2/1‑76 (MQ=255)
                                                                             aaTTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccac                                                                      <  1:3186072‑M2/150‑78 (MQ=255)
                                                                              aTTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccaca                                                                     <  1:393645‑M2/150‑79 (MQ=255)
                                                                              aTTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatactacaaaccaca                                                                     <  1:47441‑M2/150‑79 (MQ=255)
                                                                                   gATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagttta                                                                <  1:2019412‑M2/150‑84 (MQ=255)
                                                                                        gATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaa                                                           <  1:951506‑M2/150‑89 (MQ=255)
                                                                                                gggCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaanatga                                                   <  1:3654790‑M2/150‑97 (MQ=255)
                                                                                                   cGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaat                                                >  1:3449285‑M2/1‑51 (MQ=255)
                                                                                                   cGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaat                                                <  1:3701626‑M2/150‑100 (MQ=255)
                                                                                                   cGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaat                                                <  1:2098834‑M2/150‑100 (MQ=255)
                                                                                                      tttttATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgat                                             <  1:484641‑M2/150‑103 (MQ=255)
                                                                                                      tttttATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgat                                             <  1:484638‑M2/150‑103 (MQ=255)
                                                                                                      tttttATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgat                                             <  1:1516029‑M2/150‑103 (MQ=255)
                                                                                                       ttttATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAGAGGTtttttttgggattgtgatgattgattttgtggcatatttttggctcttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgatt                                            <  1:1749447‑M2/150‑104 (MQ=255)
                                                                                                        tttATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgatta                                           <  1:1730901‑M2/150‑105 (MQ=255)
                                                                                                         ttATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaa                                          >  1:1294233‑M2/1‑45 (MQ=255)
                                                                                                           aTCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaatt                                        <  1:500600‑M2/150‑108 (MQ=255)
                                                                                                           aTCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgat                                             >  1:1106089‑M2/1‑43 (MQ=255)
                                                                                                                  tCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatga                                 <  1:1079128‑M2/150‑115 (MQ=255)
                                                                                                                  tCATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatga                                 <  1:3268559‑M2/150‑115 (MQ=255)
                                                                                                                   cATGCTTCTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgat                                <  1:539935‑M2/150‑116 (MQ=255)
                                                                                                                          cTATGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggt                         <  1:3086700‑M2/150‑123 (MQ=255)
                                                                                                                            aTGATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtat                       <  1:3475142‑M2/150‑125 (MQ=255)
                                                                                                                              gATAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtatta                     <  1:2911608‑M2/150‑127 (MQ=255)
                                                                                                                               aTAAGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataacgatggttggtattat                    <  1:3678950‑M2/150‑128 (MQ=255)
                                                                                                                                tAAGCCATATATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatg                   <  1:1008535‑M2/150‑129 (MQ=255)
                                                                                                                                tAAGCCATATATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatg                   <  1:1008534‑M2/150‑129 (MQ=255)
                                                                                                                                  aGCCATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgtt                 <  1:17482‑M2/150‑131 (MQ=255)
                                                                                                                                    ccATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttct               >  1:3531401‑M2/1‑18 (MQ=255)
                                                                                                                                     cATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattaccaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttctt              <  1:2605398‑M2/150‑134 (MQ=255)
                                                                                                                                     cATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttctt              >  1:1704375‑M2/1‑17 (MQ=255)
                                                                                                                                     cATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccaacgtttaagaaagaatatgaaatgattacttataatgatggttggtatcatgttctt              <  1:2605396‑M2/150‑134 (MQ=255)
                                                                                                                                     cATTTATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatgtctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtagtatgttctt              >  1:783758‑M2/1‑17 (MQ=255)
                                                                                                                                       tttATAAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgc            >  1:2982674‑M2/1‑15 (MQ=255)
                                                                                                                                         tataAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctc          <  1:1587325‑M2/150‑138 (MQ=255)
                                                                                                                                         tataAAAAAACATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctc          >  1:3578070‑M2/1‑13 (MQ=255)
                                                                                                                                            aaaaaaaCATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgtt       <  1:1825312‑M2/150‑141 (MQ=255)
                                                                                                                                                 aaCATtttttttgagattgtgatgattgcttttgtggcatatttttggcttttttcatttctgacaggatattacaaaccacagtttaagaaagaatatgaaatgattaattataatgatggttggtattatgttcttgctcgttatgat  >  1:569250‑M2/1‑5 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
ATTGAGTTTTCTATATTGAGACAGAAGATTCAGGTACCTCTTTTGCTACTGTCAGCAGCGATTGCGCTGGCGGTTACAATTTCGATAAGATCTTATGGGCGATTTTTATCGGTATCATGCTTCTATGATAAGCCATTTATAAAAAAACATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T  >  Xen14_189/298‑453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.