New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Xen14_145 1 =0 (0.000)40 (0.160) 24/210 0.5 100% intergenic (–/–) –/– –/–
?Xen14_32 = 55348 0 (0.000)intergenic (+261/–) Xen14_03070/– hypothetical protein/–

CCGTCCCGGAACCGCAGTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATGCAGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGA  >  Xen14_32/55202‑55391
                                                                                                                                                  |                                                                                                                  
ccGTCCCGGAACCGCAGTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGa                                                                                                                 <  1:1939505/150‑1 (MQ=255)
ccGTCCCGGAACCGCAGTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGa                                                                                                                 <  1:680354/150‑1 (MQ=255)
  gTCCCGGAACCGCAGTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGAta                                                                                                               >  1:3649615/1‑150 (MQ=255)
    cccGGAACCGCAGTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGAtaag                                                                                                             <  1:1480173/150‑1 (MQ=255)
     ccGGAACCGCAGTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGCTCACAGAGATATTGCAATTGCCTCCGGAtaagt                                                                                                            >  1:73779/1‑150 (MQ=255)
     ccGGAACCGCAATTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCTTCCGGAtaagt                                                                                                            >  1:502392/1‑150 (MQ=255)
           ccGCAGTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAgggg                                                                                                      >  1:3548345/1‑150 (MQ=255)
            cGCAGTTCGTAGAGCGATTGTTGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGTGga                                                                                                     >  1:3576276/1‑150 (MQ=255)
                gTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGACATTGCAATTGCCTCCGGATAAGTAAGGGGAGAtt                                                                                                 >  1:233526/1‑150 (MQ=255)
                gTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGACATTGCAATTGCCTCCGGATAAGTAAGGGGAGAtt                                                                                                 >  1:233525/1‑150 (MQ=255)
                gTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGACATTGCAATTGCCTCCGGATAAGTAAGGGGAGAtt                                                                                                 >  1:233529/1‑150 (MQ=255)
                gTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGACATTGCAATTGCCTCCGGATAAGTAAGGGGAGAtt                                                                                                 >  1:233530/1‑150 (MQ=255)
                  tCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGc                                                                                               >  1:727747/1‑150 (MQ=255)
                   cGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCACAGCCTTTCTTCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCa                                                                                              >  1:3608801/1‑150 (MQ=255)
                    gTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCAc                                                                                             >  1:950163/1‑150 (MQ=255)
                    gTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCAc                                                                                             <  1:2548015/150‑1 (MQ=255)
                    gTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCAc                                                                                             <  1:2548016/150‑1 (MQ=255)
                    gTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCAc                                                                                             <  1:1589558/150‑1 (MQ=255)
                    gTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCAc                                                                                             >  1:950158/1‑150 (MQ=255)
                    gTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCAc                                                                                             >  1:950159/1‑150 (MQ=255)
                          cGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCa                                                                                       >  1:656995/1‑150 (MQ=255)
                              tGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATg                                                                                   <  1:833698/150‑1 (MQ=255)
                              tGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTACACTATGCAAATg                                                                                   <  1:833697/150‑1 (MQ=255)
                                   ggTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATgcagca                                                                              >  1:1256391/1‑150 (MQ=255)
                                   ggTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATgcagca                                                                              >  1:1256392/1‑150 (MQ=255)
                                   ggTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATgcagca                                                                              >  1:1256395/1‑150 (MQ=255)
                                           gtgtGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGTAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatgg                                                                      >  1:1368434‑M2/1‑104 (MQ=255)
                                            tgtgAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggt                                                                     <  1:3269991‑M2/150‑48 (MQ=255)
                                             gtgAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCCCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATg                                                                                   >  1:3687593/1‑135 (MQ=255)
                                                  tGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggatgagtaaggggagattgcactatgcaaatgcagcatctgatggttggcta                                                               <  1:3250735‑M2/150‑54 (MQ=255)
                                                   gTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaagggtagattgcactatgcaaatgcagcatctgatggttagctat                                                              <  1:2388939‑M2/150‑55 (MQ=255)
                                                   gTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttagctat                                                              <  1:2388936‑M2/150‑55 (MQ=255)
                                                   gTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttagctat                                                              <  1:2388937‑M2/150‑55 (MQ=255)
                                                   gTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATGCAGCAt                                                                             <  1:3185295/135‑1 (MQ=255)
                                                     cAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcc                                                            <  1:1467360‑M2/150‑57 (MQ=255)
                                                     cAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcc                                                            <  1:1574397‑M2/150‑57 (MQ=255)
                                                         aTCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaag                                                        >  1:414402‑M2/1‑90 (MQ=255)
                                                          tCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACATATATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagt                                                       >  1:2753000‑M2/1‑89 (MQ=255)
                                                          tCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACATAGATTTTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagt                                                       >  1:2752999‑M2/1‑89 (MQ=255)
                                                          tCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACATAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagt                                                       >  1:2753003‑M2/1‑89 (MQ=255)
                                                          tCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACATAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagt                                                       >  1:2753001‑M2/1‑89 (MQ=255)
                                                          tCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagt                                                       >  1:1465803‑M2/1‑89 (MQ=255)
                                                                      tAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacgg                                           <  1:2132886‑M2/150‑74 (MQ=255)
                                                                      tAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacgg                                           <  1:3204346‑M2/150‑74 (MQ=255)
                                                                          gAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccga                                       <  1:1739103‑M2/150‑78 (MQ=255)
                                                                           aGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgat                                      <  1:3230337‑M2/150‑79 (MQ=255)
                                                                           aGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgat                                      >  1:1008920‑M2/1‑72 (MQ=255)
                                                                           aGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgat                                      <  1:3230336‑M2/150‑79 (MQ=255)
                                                                            gCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCGCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggcgatccgaaggactaccaaacggccgatt                                     >  1:3339379‑M2/1‑71 (MQ=255)
                                                                                acacacCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccaattatgc                                 >  1:1401400‑M2/1‑67 (MQ=255)
                                                                                   caccacCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgtt                              <  1:475721‑M2/150‑87 (MQ=255)
                                                                                    accaccAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttg                             >  1:2240167‑M2/1‑63 (MQ=255)
                                                                                    accaccAGAGCGCTTCATAGCCTTTCTCCTATGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttg                             >  1:2173715‑M2/1‑63 (MQ=255)
                                                                                    accaccAGAGCGCTTCATAGCCTTTCTCCTATGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttg                             >  1:2173714‑M2/1‑63 (MQ=255)
                                                                                    accaccAGAGCGCTTCATAGCCTTTCTCCTATGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttg                             >  1:2173713‑M2/1‑63 (MQ=255)
                                                                                             gcgcTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctacgtactaccaaacggccgattatgcgttgaggctttca                    <  1:2085687‑M2/150‑97 (MQ=255)
                                                                                              cgcTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcag                   >  1:1811837‑M2/1‑53 (MQ=255)
                                                                                              cgcTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagatcgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcag                   >  1:1195981‑M2/1‑53 (MQ=255)
                                                                                                    aTAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttccgtgatgg             <  1:407174‑M2/150‑104 (MQ=255)
                                                                                                       gCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctg          >  1:2140576‑M2/1‑44 (MQ=255)
                                                                                                       gCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctg          <  1:867154‑M2/150‑107 (MQ=255)
                                                                                                       gCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctg          <  1:867157‑M2/150‑107 (MQ=255)
                                                                                                       gCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctg          <  1:3352388‑M2/150‑107 (MQ=255)
                                                                                                       gCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctg          <  1:3347595‑M2/150‑107 (MQ=255)
                                                                                                          tttCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctgata       <  1:3209308‑M2/150‑110 (MQ=255)
                                                                                                            tctcCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctgatata     <  1:3812934‑M2/150‑112 (MQ=255)
                                                                                                             ctcCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctgatatag    <  1:272481‑M2/150‑113 (MQ=255)
                                                                                                               ccTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCggataagtaaggggagattgcactatgcaaatgcagcatctgatggttggctatcctaagtactaccaaacggccgattatgcgttgaggctttcagtgatggctgatatagca  <  1:1686650‑M2/150‑115 (MQ=255)
                                                                                                                                                  |                                                                                                                  
CCGTCCCGGAACCGCAGTTCGTAGAGCGATTGTCGGGTCAGGAGTGTGAATGTCAGAATCGTAATGCAGATAATGAGCAGACACACCACCAGAGCGCTTCATAGCCTTTCTCCTGTGTAAGTTCACAGAGATATTGCAATTGCCTCCGGATAAGTAAGGGGAGATTGCACTATGCAAATGCAGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTGA  >  Xen14_32/55202‑55391

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.