| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_141 | 1 = | 0 (0.000) | 32 (0.040) +GCTCTCC |
23/282 | 1.6 | 100% | intergenic (–/‑23) | –/Xen14_04755 | –/hypothetical protein |
| ? | Xen14_39 | = 48485 | 0 (0.000) | intergenic (‑47/–) | Xen14_03386/– | hypothetical protein/– | |||||
TATCGAGTTGGTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_39/48339‑48485 | tatCGAGTTGGTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAgga < 1:1766369‑M2/150‑4 (MQ=255) tCGAGTTGGTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGCTCACGGGGGTAATCTGCTCTCCTGATTCAggaga < 1:2873807‑M2/150‑6 (MQ=255) tCGAGTTGGTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggaga > 1:1052747‑M2/1‑145 (MQ=255) ttGGTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagctta < 1:619589‑M2/150‑11 (MQ=255) gTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatgg < 1:2900080‑M2/150‑14 (MQ=255) gTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatgg < 1:2900085‑M2/150‑14 (MQ=255) gTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatgg > 1:1885475‑M2/1‑137 (MQ=255) tGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggt < 1:405288‑M2/150‑15 (MQ=255) tttATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAGGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcac > 1:483638‑M2/1‑133 (MQ=255) tttATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcac > 1:483649‑M2/1‑133 (MQ=255) tttATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcac > 1:483646‑M2/1‑133 (MQ=255) aGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttga > 1:2074764‑M2/1‑127 (MQ=255) aGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttga > 1:2623175‑M2/1‑127 (MQ=255) aGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCATGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttga < 1:184457‑M2/150‑24 (MQ=255) tttttCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCATGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgaga < 1:3514436‑M2/150‑26 (MQ=255) ttttCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagac < 1:558321‑M2/150‑27 (MQ=255) gTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagtta < 1:2688642‑M2/150‑32 (MQ=255) gTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagtta < 1:3357945‑M2/150‑32 (MQ=255) ttAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttat < 1:564469‑M2/150‑33 (MQ=255) aGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatgga > 1:1380637‑M2/1‑115 (MQ=255) aGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatgga > 1:1380640‑M2/1‑115 (MQ=255) gCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaa > 1:3269541‑M2/1‑114 (MQ=255) cattgcaCCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGCTTCAggagagcttatggtcacttttgagacagttatggaaa < 1:2381496‑M2/147‑38 (MQ=255) cattgcaCCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaa < 1:2381489‑M2/147‑38 (MQ=255) cTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaatt < 1:559889‑M2/150‑40 (MQ=255) gCACCGCTATTTTCAGGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaattaa > 1:2896424‑M2/1‑109 (MQ=255) cACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaattaaa > 1:3195649‑M2/1‑108 (MQ=255) aCCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaattaaaa > 1:3335900‑M2/1‑107 (MQ=255) ccGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCGTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaattaaaat < 1:2934471‑M2/150‑45 (MQ=255) ccGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagctatggaaattaaaat > 1:1950264‑M2/1‑106 (MQ=255) tATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaattaaaatcctg > 1:861527‑M2/1‑102 (MQ=255) aTTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaattaaaatcctgc > 1:1333553‑M2/1‑101 (MQ=255) tGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagca > 1:3143237‑M2/1‑94 (MQ=255) tGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcacttttgagacagttatggaaattaaaatcctgcacaagca > 1:3143236‑M2/1‑94 (MQ=255) gataACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCAggagagcttatggtcccttttgagacagttatggaaattaaaatcctgcacaagaagggaatga < 1:3739716‑M2/150‑65 (MQ=255) | TATCGAGTTGGTGATTTATCAGTTTTTCGTTAAGCACTGCACCGCTATTTTCATGAAGATAGATAACGATTGTCACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGATTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_39/48339‑48485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |