| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_119 | = 3208 | 0 (0.000) | 44 (0.070) | 28/246 | 1.6 | 100% | intergenic (+81/–) | crcB/– | Putative fluoride ion transporter CrcB/– |
| ? | Xen14_168 | 26 = | 0 (0.000) | intergenic (–/+34) | –/Xen14_04774 | –/IS200/IS605 family transposase IS200C | |||||
TTTTGGGGTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_119/3063‑3208 | ttttGGGGTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGCCCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcg > 1:156471‑M1/1‑146 (MQ=255) ggTCTTTTGCAATGACCACACGGGCTTTCTGGCTGTTTTCGGCATCAACCGCCCACTAAGGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacg < 1:2613930‑M1/150‑11 (MQ=255) ggTCTGTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCGCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacg < 1:2613927‑M1/150‑11 (MQ=255) gTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacga < 1:2955459‑M1/150‑12 (MQ=255) cTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatc > 1:3622367‑M1/1‑137 (MQ=255) tttGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctg < 1:2346373‑M1/150‑16 (MQ=255) tgaaatgacCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTGTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAtgcgcacacgagctgac < 1:1447995‑M1/146‑18 (MQ=255) ccATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacat > 1:151500‑M1/1‑131 (MQ=255) tGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttg < 1:3233221‑M1/150‑23 (MQ=255) cGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCAGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatc > 1:2589636‑M1/1‑124 (MQ=255) tGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaact > 1:3316307‑M1/1‑119 (MQ=255) gCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttc < 1:1240063‑M1/150‑34 (MQ=255) cTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcg > 1:298764‑M1/1‑116 (MQ=255) ggCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgatatttgcatccaacttcgttactt > 1:1923325‑M1/1‑110 (MQ=255) cTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcaca < 1:1561159‑M1/116‑9 (MQ=255) gTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacgg > 1:777142‑M1/1‑106 (MQ=255) gTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTACGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacgg < 1:731598‑M1/150‑45 (MQ=255) cAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgg < 1:3732839‑M1/150‑56 (MQ=255) cAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgg < 1:3276760‑M1/150‑56 (MQ=255) ccGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggct > 1:3533540‑M1/1‑92 (MQ=255) cGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaaggggctg > 1:2004704‑M1/1‑91 (MQ=255) cGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctg > 1:2004703‑M1/1‑91 (MQ=255) cacTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccg < 1:762354‑M1/150‑64 (MQ=255) cacTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccg < 1:2010469‑M1/150‑64 (MQ=255) tAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacggg > 1:1125676‑M1/1‑84 (MQ=255) aGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagg < 1:938543‑M1/150‑70 (MQ=255) aGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTACAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacactatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagg < 1:3633306‑M1/150‑70 (MQ=255) aGACCAAATAAATATCCTACGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGGCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggat > 1:3806234‑M1/1‑81 (MQ=255) gACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggataggg < 1:2377728‑M1/150‑71 (MQ=255) gACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggataggg < 1:2377733‑M1/150‑71 (MQ=255) aCCAAATAAATATCCTCCTGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCGCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggataggga < 1:1074238‑M1/150‑72 (MQ=255) cAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacatgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaat > 1:3519467‑M1/1‑77 (MQ=255) cAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcacggatagggaat > 1:1077364‑M1/1‑77 (MQ=255) cAAATAAATATCCTCCGGCATAGCCGGAGG‑TTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:1651903‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAATGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggntgcccggatagggaatc < 1:2579506‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc > 1:3506301‑M1/1‑76 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:3163948‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:3163947‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc > 1:2962814‑M1/1‑76 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:289625‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:289622‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:289617‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc < 1:2219507‑M1/150‑75 (MQ=255) aaataaatATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAggcgcacacgatctgacatttgcatccaacttcgttacttacggcccgtaaacgggctgcccggatagggaatc > 1:2034528‑M1/1‑76 (MQ=255) | TTTTGGGGTCTTTTGCCATGACCGCACTGGCTTTCTGGCTGTTTTCGGCCTCAACCGCACACTAAAGACCAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAAATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_119/3063‑3208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |