| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_180 | = 75 | NA (NA) | 40 (0.440) +TTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCC |
23/216 | 0.7 | NA | intergenic (–/–) | –/– | –/– |
| ? | Xen14_68 | 16309 = | NA (NA) | intergenic (+29/–) | rph/– | Ribonuclease PH/– | |||||
‑‑CCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_180/1‑75‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGTTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AAAAC‑‑‑‑‑‑‑‑‑‑‑ > Xen14_68/16309‑16382 |||||||||||||||||||||||||||||||||||||||| atCCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGG < 1:3719292/148‑1 tCCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGG > 1:538977/2‑150 CCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGG < 1:1667694/150‑1 CCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGG < 1:1667695/150‑1 CCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGG < 1:748082/150‑1 AAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGG > 1:1511061/1‑150 AAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGCTCCGG > 1:3587679/1‑150 AAACGGTGGATCAATATTGGGCCGTTGGTGAAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCGGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGA > 1:2362396/1‑150 ACGGTGGATCAGTATTGGGCCGTTGGTGGAGATAGAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAAAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAA < 1:2596369/150‑1 CGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAG > 1:2959319/1‑150 GGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGC < 1:2009973/150‑1 GGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTT < 1:2008270/150‑1 GATCAATATTTGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCTCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCGAGGCTGGAGGGTCCGGAAAGCTTTC < 1:2427445/150‑1 GATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTC < 1:2217001/150‑1 GATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTC < 1:1325861/150‑1 GATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAAACCCCAGATAGGCTGGGGGGTCCGGAAAGCTTTC > 1:3682933/1‑150 GATCAATATTGGGCCGTTGGTGGAGATATAAGTGGACCACTTTTCATCCTTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTC < 1:3469826/150‑1 ATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCATGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAAAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCA < 1:3713668/150‑1 ATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCA > 1:2867393/1‑150 ATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCA > 1:2867390/1‑150 ATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCA < 1:3713669/150‑1 CAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAATCTTTCAGC < 1:3176444/150‑1 CAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGAGGGTCCGGAAAGCTTTCAGC < 1:2171375/150‑1 CAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGACCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGC < 1:1322534/150‑1 ATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTG < 1:618696/150‑1 ATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTG < 1:1254862/150‑1 TTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGA < 1:1572372/150‑1 TGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGAG < 1:804491/150‑1 CGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTgaaagctttccgg < 1:2824588/146‑14 CGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGAGCCAGT > 1:484480/1‑150 CGTTGGTGGAGACATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCNTTCAGCTTTGAGCCAGT < 1:2578542/150‑1 TGGAGATATAAGTGGAGCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGTGGGTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AA < 1:2069232/150‑1 GAGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AAAA < 1:3436189/150‑1 AGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AAAAC < 1:2719791/150‑1 AGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AAAAC > 1:2001544/1‑150 AGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AAAAC < 1:1727246/150‑1 AGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AAAAC < 1:1727243/150‑1 AGATATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGACTTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AAAAC < 1:1727245/150‑1 TATAAGTGGATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTAGAGCCAGTTATT‑AAAACccc > 1:3804095/1‑147 ATCACTTTTCATCCGTCGTTGACATTTGCGCCCGGATCAGGCCGCAGGGGGAAACTCTGCGGCCTTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGGTCCGGAAAGCTTTCAGCTTTTAGCCAGTTATTCAAAACccttttttttt > 1:2597721/1‑139 |||||||||||||||||||||||||||||||||||||||| ‑‑CCTGAGTAAAACGGTGGATCAATATTGGGCCGTTGGTGGAGATATAAGTGGATCACTTTTCATCCGTCGTTGACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Xen14_180/1‑75‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTTTGTGCACAGAAAACCCCCAGCTAGGCTGGGGGTTCCGGAAAGCTTTCAGCTTTGAGCCAGTTATT‑AAAAC‑‑‑‑‑‑‑‑‑‑‑ > Xen14_68/16309‑16382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |