| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Xen14_41 | 1 = | 0 (0.000) | 56 (1.040) | 35/162 | 0.2 | 100% | noncoding (1/76 nt) | Xen14_03432 | tRNA‑Arg(acg) |
| ? | Xen14_76 | = 12864 | 0 (0.000) | intergenic (+63/–) | Xen14_04356/– | tRNA‑Arg(acg)/– | |||||
AGAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_41/148‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAT < Xen14_76/12864‑12784 AGAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCA > 1:12013/1‑150AGAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCA > 1:1418406/1‑150 GAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGGAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAT > 1:3102880/1‑150 AAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGAAGGATCCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCG > 1:1323784/1‑150 AAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGAAGGATCCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCG > 1:1323786/1‑150 AAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGAAGGATCCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCG > 1:1323787/1‑150 ATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG < 1:798187/150‑1 AGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAa < 1:3112823/150‑2 GGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAat < 1:178051/150‑3 AAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAattt > 1:1974895/1‑146 ATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTAT < 1:2982431/150‑1 ATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTAT > 1:1574466/1‑150 GATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGGGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTT > 1:3066160/1‑150 GTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATT < 1:865905/142‑1 TAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTG < 1:3440800/150‑1 GTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGAT < 1:751471/150‑1 GTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGAT > 1:2091592/1‑150 GTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTAC < 1:3779281/143‑1 ATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATT < 1:2653932/150‑1 TTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTTCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTG < 1:2636431/150‑1 TTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGATCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTG < 1:2636432/150‑1 TTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTG < 1:3836338/150‑1 TTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTG > 1:2015440/1‑150 GAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATAt < 1:1129534/150‑2 AAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATAtc > 1:3340266/1‑148 AATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATAtcg < 1:2504633/150‑4 AGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCtac < 1:2388772/150‑4 GATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACT > 1:2926539/1‑150 ATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAA < 1:846910/150‑1 TTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGC < 1:3757703/150‑1 TTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATT < 1:982322/119‑1 tgTGAAGGAAATTTTGGGTAGGATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCA < 1:1781839/148‑1 TTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCC < 1:3091034/150‑1 TTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCC < 1:3114810/150‑1 AAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATAT > 1:2461249/1‑150 GGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTT > 1:2043634/1‑114 AAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAG < 1:1422111/150‑1 AAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGT < 1:1703510/150‑1 catatcaagtaagagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTA < 1:2032365/135‑1 ATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCAT < 1:91928/142‑1 TTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTcctttcc > 1:3383471/1‑102 TTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTAAGA < 1:1466574/150‑1 caagtaagagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGA > 1:3015662/11‑150 TTTGGAGAATATGGTGCGTCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTAAGAG < 1:2406503/150‑1 aagtaagagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCNTCNGGAAA‑TTTATTTTACTGCTGATCTTGATNCCTCCCATGAAGCCATATCAAGTAAGAGAT > 1:3568114/10‑150 GGAGGATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATT < 1:554631/100‑1 taagagATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGT < 1:1603977/144‑1 ATGGTGCATCCGGGAGGATTCGAACCTCCGATCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATC < 1:1044553/150‑1 ATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATC < 1:1044554/150‑1 ATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATC < 1:1044552/150‑1 ATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATC < 1:1044549/150‑1 ATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTTATTTTACTACTGATATTGATATCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATC < 1:1044551/150‑1 TGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCG < 1:2690963/150‑1 GTGCATCCGGGAGAATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGG < 1:1187948/150‑1 CATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGGTGGTGCATCCGGGAGG < 1:2437514/150‑1 TCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAT < 1:1863244/150‑1 AGAAAATTCAGGAAATGGATAAAGTAGTTATTTAGAAATGAGATATTTTTGAAGGAAATTTTTTGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Xen14_41/148‑1‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggaggattcgaacctccgaccgctcggttcgtagccgagtactctatccagctgagctacggatgCATCGGGAAA‑TTTATTTTACTGCTGATATTGATACCGCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAT < Xen14_76/12864‑12784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |