locus_tag chrom start end strand product gene CoreName CoreHMM CoreBlast ContextName ContextHMM AOI_1_1 NZ_JAFMOF010000003.1_AOI_1 1 447 + Proline--tRNA ligase 1 proS1 AOI_1_2 NZ_JAFMOF010000003.1_AOI_1 478 1416 - Streptomycin 6-kinase sph AOI_1_3 NZ_JAFMOF010000003.1_AOI_1 1464 1910 - AOI_1_4 NZ_JAFMOF010000003.1_AOI_1 1907 2080 - AOI_1_sORF_0001 NZ_JAFMOF010000003.1_AOI_1 2126 2390 + AOI_1_sORF_0002 NZ_JAFMOF010000003.1_AOI_1 2173 2524 + AOI_1_5 NZ_JAFMOF010000003.1_AOI_1 2639 3166 + Ribosome maturation factor RimP rimP AOI_1_6 NZ_JAFMOF010000003.1_AOI_1 3169 4155 + Transcription termination/antitermination protein NusA nusA AOI_1_7 NZ_JAFMOF010000003.1_AOI_1 4403 4639 + AOI_1_sORF_0003 NZ_JAFMOF010000003.1_AOI_1 4655 5024 - AOI_1_sORF_0004 NZ_JAFMOF010000003.1_AOI_1 4655 4967 - AOI_1_sORF_0005 NZ_JAFMOF010000003.1_AOI_1 4655 4904 - AOI_1_sORF_0006 NZ_JAFMOF010000003.1_AOI_1 4655 4859 - AOI_1_sORF_0003 NZ_JAFMOF010000003.1_AOI_1 4792 5299 + AOI_1_sORF_0004 NZ_JAFMOF010000003.1_AOI_1 4834 5299 + AOI_1_sORF_0002 NZ_JAFMOF010000003.1_AOI_1 4852 5059 - AOI_1_sORF_0005 NZ_JAFMOF010000003.1_AOI_1 4927 5299 + AOI_1_sORF_0006 NZ_JAFMOF010000003.1_AOI_1 5247 5646 + AOI_1_sORF_0007 NZ_JAFMOF010000003.1_AOI_1 5298 5646 + AOI_1_sORF_0008 NZ_JAFMOF010000003.1_AOI_1 5334 5646 + AOI_1_sORF_0009 NZ_JAFMOF010000003.1_AOI_1 5364 5646 + AOI_1_sORF_0010 NZ_JAFMOF010000003.1_AOI_1 5415 5646 + AOI_1_sORF_0011 NZ_JAFMOF010000003.1_AOI_1 5457 5646 + AOI_1_sORF_0001 NZ_JAFMOF010000003.1_AOI_1 5541 5916 - AOI_1_8 NZ_JAFMOF010000003.1_AOI_1 5999 7840 + Translation initiation factor IF-2 infB AOI_1_9 NZ_JAFMOF010000003.1_AOI_1 7994 8290 + Uncharacterized protein YlxP ylxP AOI_1_10 NZ_JAFMOF010000003.1_AOI_1 8345 8800 + Ribosome-binding factor A rbfA AOI_1_11 NZ_JAFMOF010000003.1_AOI_1 8797 9699 + tRNA pseudouridine synthase B truB AOI_1_12 NZ_JAFMOF010000003.1_AOI_1 9951 13241 + AOI_1_13 NZ_JAFMOF010000003.1_AOI_1 13211 14716 + AOI_1_14 NZ_JAFMOF010000003.1_AOI_1 14695 15582 + Bifunctional riboflavin kinase/FMN adenylyltransferase ribF AOI_1_15 NZ_JAFMOF010000003.1_AOI_1 15659 18655 - Flagellum site-determining protein YlxH ylxH AOI_1_16 NZ_JAFMOF010000003.1_AOI_1 18851 19585 - AOI_1_17 NZ_JAFMOF010000003.1_AOI_1 19585 20871 - AOI_1_18 NZ_JAFMOF010000003.1_AOI_1 21086 22654 + ESX-3 secretion system ATPase EccB3 eccB3 AOI_1_19 NZ_JAFMOF010000003.1_AOI_1 22667 23914 + M-protease aprE Peptidase_S8 PF00082.26 AOI_1_19 NZ_JAFMOF010000003.1_AOI_1 22667 23914 + M-protease aprE protease_PatA TIGR03895.1 AOI_1_20 NZ_JAFMOF010000003.1_AOI_1 24181 25521 + AOI_1_21 NZ_JAFMOF010000003.1_AOI_1 25578 27047 + AOI_1_22 NZ_JAFMOF010000003.1_AOI_1 27108 27344 - AOI_1_23 NZ_JAFMOF010000003.1_AOI_1 27537 27941 + AOI_1_24 NZ_JAFMOF010000003.1_AOI_1 27999 28307 + AOI_1_25 NZ_JAFMOF010000003.1_AOI_1 28412 32365 - ESX secretion system protein EccC eccC AOI_1_26 NZ_JAFMOF010000003.1_AOI_1 32562 33998 + AOI_1_27 NZ_JAFMOF010000003.1_AOI_1 34229 34516 + 30S ribosomal protein S15 rpsO AOI_1_28 NZ_JAFMOF010000003.1_AOI_1 34829 37048 + Polyribonucleotide nucleotidyltransferase pnp AOI_1_29 NZ_JAFMOF010000003.1_AOI_1 37066 38052 + Uncharacterized zinc protease SCO5738 metK1 AOI_2_1 NZ_JAFMOF010000003.1_AOI_2 1 1908 + Vitamin B12-dependent ribonucleotide reductase nrdJ AOI_2_2 NZ_JAFMOF010000003.1_AOI_2 2067 2420 - HTH-type transcriptional regulator HmrR hmrR AOI_2_3 NZ_JAFMOF010000003.1_AOI_2 2448 3308 + AOI_2_4 NZ_JAFMOF010000003.1_AOI_2 3431 4036 + AOI_2_5 NZ_JAFMOF010000003.1_AOI_2 4145 4804 + 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase gpmA AOI_2_6 NZ_JAFMOF010000003.1_AOI_2 4867 5709 + Uncharacterized protein AF_1724 acaA AOI_2_7 NZ_JAFMOF010000003.1_AOI_2 5788 6489 + Ribonuclease HII rnhB AOI_2_8 NZ_JAFMOF010000003.1_AOI_2 6686 7120 + AOI_2_9 NZ_JAFMOF010000003.1_AOI_2 7176 7754 - AOI_2_10 NZ_JAFMOF010000003.1_AOI_2 7978 10143 - Probable ATP-dependent DNA helicase RecQ recQ AOI_2_11 NZ_JAFMOF010000003.1_AOI_2 10303 11796 + AOI_2_12 NZ_JAFMOF010000003.1_AOI_2 12121 13941 + AOI_2_13 NZ_JAFMOF010000003.1_AOI_2 14031 14792 + ADP-ribose pyrophosphatase nudF AOI_2_14 NZ_JAFMOF010000003.1_AOI_2 14945 16711 + Nod factor export ATP-binding protein I nodI ABC_tran PF00005.31 AOI_2_14 NZ_JAFMOF010000003.1_AOI_2 14945 16711 + Nod factor export ATP-binding protein I nodI galliderm_ABC TIGR03740.1 AOI_2_14 NZ_JAFMOF010000003.1_AOI_2 14945 16711 + Nod factor export ATP-binding protein I nodI galliderm_ABC TIGR03740.1 AOI_2_sORF_0001 NZ_JAFMOF010000003.1_AOI_2 16717 16942 + AOI_2_15 NZ_JAFMOF010000003.1_AOI_2 16962 17825 + Probable D-xylose utilization operon transcriptional repressor gntR AOI_2_16 NZ_JAFMOF010000003.1_AOI_2 18209 19768 + RNA polymerase principal sigma factor HrdB hrdB AOI_2_17 NZ_JAFMOF010000003.1_AOI_2 19922 20860 + Trypsin trxB AOI_2_18 NZ_JAFMOF010000003.1_AOI_2 21012 21242 - AOI_2_sORF_0002 NZ_JAFMOF010000003.1_AOI_2 21364 21607 + AOI_2_sORF_0001 NZ_JAFMOF010000003.1_AOI_2 21404 21629 - AOI_2_19 NZ_JAFMOF010000003.1_AOI_2 21676 23796 + DNA gyrase subunit B gyrB AOI_2_20 NZ_JAFMOF010000003.1_AOI_2 24003 24512 + AOI_2_21 NZ_JAFMOF010000003.1_AOI_2 24509 26104 + Monocarboxylic acid transporter mctC AOI_2_22 NZ_JAFMOF010000003.1_AOI_2 26135 26815 - Probable C4-dicarboxylate response regulator DctR dctR Response_reg PF00072.28 AOI_2_23 NZ_JAFMOF010000003.1_AOI_2 26812 28443 - Sensor protein CitS citS HATPase_c_2 PF13581.10 AOI_2_24 NZ_JAFMOF010000003.1_AOI_2 28741 29595 + Uncharacterized ABC transporter ATP-binding protein MJ0412 cbiM ABC_tran PF00005.31 AOI_2_24 NZ_JAFMOF010000003.1_AOI_2 28741 29595 + Uncharacterized ABC transporter ATP-binding protein MJ0412 cbiM galliderm_ABC TIGR03740.1 AOI_2_24 NZ_JAFMOF010000003.1_AOI_2 28741 29595 + Uncharacterized ABC transporter ATP-binding protein MJ0412 cbiM galliderm_ABC TIGR03740.1 AOI_2_25 NZ_JAFMOF010000003.1_AOI_2 29585 30460 + Uncharacterized ABC transporter permease protein YtlD ytlD AOI_2_26 NZ_JAFMOF010000003.1_AOI_2 30526 31590 + AOI_2_27 NZ_JAFMOF010000003.1_AOI_2 31616 32539 - AOI_2_28 NZ_JAFMOF010000003.1_AOI_2 32713 33753 + Zinc chaperone P47K p46 ABC_tran PF00005.31 AOI_2_29 NZ_JAFMOF010000003.1_AOI_2 33837 36293 - DNA gyrase subunit A gyrA AOI_2_30 NZ_JAFMOF010000003.1_AOI_2 36510 37865 + Probable zinc protease PqqL pqqL AOI_2_31 NZ_JAFMOF010000003.1_AOI_2 37862 39274 + AOI_2_32 NZ_JAFMOF010000003.1_AOI_2 39708 40493 + Glycyl-glycine endopeptidase ALE-1 ald 3.59 AOI_2_33 NZ_JAFMOF010000003.1_AOI_2 40771 41436 + Gluconate operon transcriptional repressor gntR AOI_2_34 NZ_JAFMOF010000003.1_AOI_2 41596 41877 - Phosphocarrier protein HPr ptsH AOI_2_35 NZ_JAFMOF010000003.1_AOI_2 42032 44800 + Acetate--CoA ligase [ADP-forming] I acaC AOI_2_36 NZ_JAFMOF010000003.1_AOI_2 44876 45463 + AOI_2_37 NZ_JAFMOF010000003.1_AOI_2 45463 46671 + AOI_2_38 NZ_JAFMOF010000003.1_AOI_2 46784 47443 + Thymidine kinase tdk AOI_2_39 NZ_JAFMOF010000003.1_AOI_2 47466 48263 - Anthracycline biosynthesis protein DnrV dnrV AOI_2_40 NZ_JAFMOF010000003.1_AOI_2 48458 49294 + Putative thiosulfate sulfurtransferase SseB sseB AOI_2_41 NZ_JAFMOF010000003.1_AOI_2 49364 50425 - Uncharacterized protein Mb0907c fadE10 AOI_2_42 NZ_JAFMOF010000003.1_AOI_2 50828 51835 + AOI_2_43 NZ_JAFMOF010000003.1_AOI_2 51846 53162 - L-gulono-1,4-lactone dehydrogenase gufA AOI_2_44 NZ_JAFMOF010000003.1_AOI_2 53125 54366 - AOI_2_45 NZ_JAFMOF010000003.1_AOI_2 54511 55089 + Coproporphyrin III ferrochelatase cpfC