locus_tag chrom start end strand gene product CoreName CoreHMM ContextName ContextHMM CoreBlast Name StructuralGene Class SubClass Peptide CysSerThr PEPMatch color Type AOI_1_1 NC_010545.1_AOI_1 2 3427 + putA Bifunctional protein PutA False lightgrey AOI_1_2 NC_010545.1_AOI_1 3424 4557 - prfB Peptide chain release factor 2 False lightgrey AOI_1_3 NC_010545.1_AOI_1 4588 5472 + hisN Histidinol-phosphatase False lightgrey AOI_1_4 NC_010545.1_AOI_1 5496 6317 + hisN Histidinol-phosphatase False lightgrey AOI_1_5 NC_010545.1_AOI_1 6408 7973 - sad Succinate-semialdehyde dehydrogenase False lightgrey AOI_1_sORF_0001 NC_010545.1_AOI_1 7983 8169 + VPLGVTAGHRASAAAAGRDRRPPCFSAGRWDQTPTTARVHSPTGSYVAGHAVALPCDRHRDD True lightgrey AOI_1_6 NC_010545.1_AOI_1 8232 9926 + pgi Glucose-6-phosphate isomerase False lightgrey AOI_1_7 NC_010545.1_AOI_1 9990 10763 + nagB Glucosamine-6-phosphate deaminase False lightgrey AOI_1_8 NC_010545.1_AOI_1 11020 12573 + pntA NAD(P) transhydrogenase subunit alpha ADH_zinc_N PF00107.30 False #6ba3ff PTM AOI_1_9 NC_010545.1_AOI_1 12577 14064 + pntB NAD(P) transhydrogenase subunit beta False lightgrey AOI_1_10 NC_010545.1_AOI_1 14225 14848 - False lightgrey AOI_1_11 NC_010545.1_AOI_1 14848 15741 - False lightgrey AOI_1_12 NC_010545.1_AOI_1 16166 17038 - nei Probable endonuclease 8 2 False lightgrey AOI_1_13 NC_010545.1_AOI_1 17097 22190 - lhr Probable ATP-dependent helicase Lhr False lightgrey AOI_1_14 NC_010545.1_AOI_1 22226 23014 + cysQ 3'-phosphoadenosine 5'-phosphate phosphatase False lightgrey AOI_1_15 NC_010545.1_AOI_1 23074 23895 + thyA Thymidylate synthase False lightgrey AOI_1_16 NC_010545.1_AOI_1 23895 24584 + folA Dihydrofolate reductase False lightgrey AOI_1_sORF_0002 NC_010545.1_AOI_1 24630 24813 + MAGFFSAIGVFAGLAEIFIKGIYKVESFPLETLEKALDDGRFFRNRKRIVMVITEASVLRP False lightgrey AOI_1_17 NC_010545.1_AOI_1 24859 25236 + False lightgrey AOI_1_18 NC_010545.1_AOI_1 25286 26893 + mctC Monocarboxylic acid transporter False lightgrey AOI_1_19 NC_010545.1_AOI_1 27254 28120 + yrrT Uncharacterized protein Mb2919c False lightgrey AOI_1_sORF_0011 NC_010545.1_AOI_1 28176 28599 - False lightgrey AOI_1_sORF_0012 NC_010545.1_AOI_1 28176 28548 - False lightgrey AOI_1_sORF_0013 NC_010545.1_AOI_1 28176 28362 - VIIALVAIPVGLFLPLLGISFAAMLAVDRLLARRRKSAVAAEGNAATGAEADPKAERELQPA False lightgrey AOI_1_sORF_0003 NC_010545.1_AOI_1 28202 28436 + LGSASAPVAALPSAATADFRRLARSLSTANMAAKLIPSSGRNRPTGIATRAMITQSMRLRFACPFSGMSRQRRSRRRR True lightgrey AOI_1_sORF_0004 NC_010545.1_AOI_1 28232 28436 + LPSAATADFRRLARSLSTANMAAKLIPSSGRNRPTGIATRAMITQSMRLRFACPFSGMSRQRRSRRRR True lightgrey AOI_1_sORF_0005 NC_010545.1_AOI_1 28361 28916 - False lightgrey AOI_1_sORF_0006 NC_010545.1_AOI_1 28361 28886 - False lightgrey AOI_1_sORF_0007 NC_010545.1_AOI_1 28361 28805 - False lightgrey AOI_1_sORF_0008 NC_010545.1_AOI_1 28361 28760 - False lightgrey AOI_1_sORF_0009 NC_010545.1_AOI_1 28361 28715 - LQALVGLCSAVAFTLAESVSWPLVWAATVLAAFLLFLALWSSGVLVLNALNGVGAACLLVAWGSALYYEYRPSQGDGVVINPLPVILLPVGALIGVVAIGVAVTYLRRGRRTSAASTG True lightgrey AOI_1_sORF_0010 NC_010545.1_AOI_1 28361 28661 - VSWPLVWAATVLAAFLLFLALWSSGVLVLNALNGVGAACLLVAWGSALYYEYRPSQGDGVVINPLPVILLPVGALIGVVAIGVAVTYLRRGRRTSAASTG True lightgrey AOI_1_20 NC_010545.1_AOI_1 29079 29591 + False lightgrey AOI_2_1 NC_010545.1_AOI_2 2 850 - yeiF Uncharacterized peptidase y4sO False lightgrey AOI_2_sORF_0001 NC_010545.1_AOI_2 1044 1227 + MKHGPGELRRGTTRNRRDSPASCITSVTCTPIMLICFIFSGKQIQFGCNEHRIFYTNPQIG True lightgrey AOI_2_2 NC_010545.1_AOI_2 1232 2047 + False lightgrey AOI_2_3 NC_010545.1_AOI_2 2260 3153 - purC Phosphoribosylaminoimidazole-succinocarboxamide synthase False lightgrey AOI_2_4 NC_010545.1_AOI_2 3221 4438 - fabG2 Uncharacterized protein Mb1524 False lightgrey AOI_2_5 NC_010545.1_AOI_2 4484 4903 - False lightgrey AOI_2_6 NC_010545.1_AOI_2 4952 6394 - purB Adenylosuccinate lyase False lightgrey AOI_2_7 NC_010545.1_AOI_2 6450 7352 - nei1 Endonuclease 8 1 False lightgrey AOI_2_8 NC_010545.1_AOI_2 7371 8648 - purD Phosphoribosylamine--glycine ligase False lightgrey AOI_2_9 NC_010545.1_AOI_2 8741 9178 + yhhZ Uncharacterized HIT-like protein ML2237 False lightgrey AOI_2_10 NC_010545.1_AOI_2 9201 10064 + lip Triacylglycerol lipase False lightgrey AOI_2_11 NC_010545.1_AOI_2 10003 11592 - tcrY Probable sensor histidine kinase TcrY HisKA,HATPase_c_2 PF00512.29,PF13581.10 False lightgrey AOI_2_12 NC_010545.1_AOI_2 11605 12312 - tcrX Probable transcriptional regulatory protein TcrX Response_reg,Trans_reg_C PF00072.28,PF00486.32 False lightgrey AOI_2_13 NC_010545.1_AOI_2 12596 13402 + False lightgrey AOI_2_14 NC_010545.1_AOI_2 13503 14033 + mshD Mycothiol acetyltransferase False lightgrey AOI_2_15 NC_010545.1_AOI_2 14064 15827 - pld Phospholipase D False lightgrey AOI_2_16 NC_010545.1_AOI_2 15827 16045 - MVAPQAAPALLLGKYPSLSHEQRAEILRQTAGPAGYPLDKQGPEGSWQRRNLPKALTAKVTIADNVSVEVAGx False lightgrey AOI_2_17 NC_010545.1_AOI_2 16481 17077 + ymcC Uncharacterized membrane protein YmcC False lightgrey AOI_2_18 NC_010545.1_AOI_2 17028 17786 + False lightgrey AOI_2_19 NC_010545.1_AOI_2 17789 18490 + False lightgrey AOI_2_20 NC_010545.1_AOI_2 18497 19468 + CurC-like False lightgrey AOI_2_21 NC_010545.1_AOI_2 19470 20864 + yteU Uncharacterized protein in tfuA 3'region TIGR00702,YcaO TIGR00702.1,PF02624.20 False #6ba3ff PTM AOI_2_22 NC_010545.1_AOI_2 20876 21709 + acaA Putative nitroreductase MJ1384 antibiot_sagB TIGR03605.1 False #6ba3ff PTM AOI_2_23 NC_010545.1_AOI_2 21706 22284 + False lightgrey AOI_2_24 NC_010545.1_AOI_2 22522 22689 + MTTVARQDPADKAKIDAIGKKLLANPENAKLIDDLGTSTTDANDLVRGHATSLDHx False lightgrey AOI_2_sORF_0002 NC_010545.1_AOI_2 22694 22898 + LNAEMDAHLGYEPGDRSGKAAARTDKYRNGSYPKTVDSNYGPVTVDVPRDRAGTFLPTMAPQRLEAFD False lightgrey AOI_2_sORF_0003 NC_010545.1_AOI_2 22725 22908 + MSPATGAEKLPLGQTSTATGRIQKPWILTTGRLLWMCREIGLEHSCRLWPRKGSRRLTDVG True lightgrey AOI_2_sORF_0007 NC_010545.1_AOI_2 22868 23183 - VLDTVKVYTDCHVRGLVDYPAAVADFNAQRIEENDRVELISLAVLPDHDLIQDGVGNRRNRLMGTINPGRSCHMVLESLIVIPPAYKLMIISPNVSQTPRAFAGP True lightgrey AOI_2_sORF_0008 NC_010545.1_AOI_2 22868 23051 - LPDHDLIQDGVGNRRNRLMGTINPGRSCHMVLESLIVIPPAYKLMIISPNVSQTPRAFAGP True lightgrey AOI_2_sORF_0004 NC_010545.1_AOI_2 22903 23128 + LGEMIISLYAGGMTIRDSSTIWQLRPGLIVPMRRFLRLPTPSWMRSWSGKTASEMSSTRSFSSMRCALKSATAAG True lightgrey AOI_2_sORF_0005 NC_010545.1_AOI_2 22939 23128 + MTIRDSSTIWQLRPGLIVPMRRFLRLPTPSWMRSWSGKTASEMSSTRSFSSMRCALKSATAAG True lightgrey AOI_2_sORF_0006 NC_010545.1_AOI_2 23610 23796 - VIDRAEIRITVEARSDAFSTIKPCSSSKVVLIFAPIRASEHIFNLRFFGGVDPLVERGAIEL True lightgrey AOI_2_25 NC_010545.1_AOI_2 23984 25333 + traY Probable transposase for insertion sequence element False lightgrey AOI_2_sORF_0009 NC_010545.1_AOI_2 25642 25870 + MRQSMGAVGTSVDNAPAESFNATLKREVLRDRKLFESPISCRQEIFRWCMRYNTRRRHSWCNLLAPMTSKRLIQLH True lightgrey AOI_2_26 NC_010545.1_AOI_2 26451 27005 + False lightgrey AOI_2_27 NC_010545.1_AOI_2 27021 27338 + yisX Insertion element IS401 uncharacterized 12.4 kDa protein MPRKYSDEFKAKAVRLAEDLVELEGCSKWGAAVEIGEKLDIPAHTLNNWLKPNMASSDAEVGAGESPADELKRLRKEIKQLRRANEILKTASAFFAAELDRPTRRx True lightgrey AOI_2_28 NC_010545.1_AOI_2 27335 28249 + IS1086 Putative transposase for insertion sequence element IS986/IS6110 False lightgrey AOI_2_29 NC_010545.1_AOI_2 28590 29738 + False lightgrey AOI_2_30 NC_010545.1_AOI_2 30038 31708 + thrE Threonine/serine exporter False lightgrey AOI_2_31 NC_010545.1_AOI_2 31797 32198 + False lightgrey AOI_2_32 NC_010545.1_AOI_2 32253 33812 + otsA Trehalose-6-phosphate synthase False lightgrey AOI_2_33 NC_010545.1_AOI_2 33812 34324 + False lightgrey AOI_2_34 NC_010545.1_AOI_2 34388 35341 + otsB Trehalose-phosphate phosphatase False lightgrey AOI_2_35 NC_010545.1_AOI_2 35431 36561 - ipsA HTH-type transcriptional regulator IpsA False lightgrey AOI_2_36 NC_010545.1_AOI_2 36669 37709 + False lightgrey AOI_2_37 NC_010545.1_AOI_2 37706 38407 + znuC Zinc import ATP-binding protein ZnuC galliderm_ABC,ABC_tran PF00005.31,TIGR03740.1 False #FF0000 Leader cleavage and transport AOI_2_38 NC_010545.1_AOI_2 38404 39411 + mntC Manganese transport system membrane protein MntC False lightgrey AOI_2_39 NC_010545.1_AOI_2 39497 40450 - fabG2 Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 False lightgrey AOI_2_40 NC_010545.1_AOI_2 40545 41135 - thiX Thiamine biosynthesis protein X False lightgrey AOI_2_41 NC_010545.1_AOI_2 41235 42284 + False lightgrey AOI_2_42 NC_010545.1_AOI_2 42274 43461 + hmuU Hemin transport system permease protein HmuU False lightgrey AOI_2_43 NC_010545.1_AOI_2 43461 44237 + hmuV Hemin import ATP-binding protein HmuV galliderm_ABC,ABC_tran PF00005.31,TIGR03740.1 False #FF0000 Leader cleavage and transport AOI_2_44 NC_010545.1_AOI_2 44260 44931 + hmuO Heme oxygenase False lightgrey AOI_2_45 NC_010545.1_AOI_2 44986 46485 - cysS Cysteine--tRNA ligase False lightgrey AOI_2_46 NC_010545.1_AOI_2 46648 47478 + yisK Uncharacterized protein YisK False lightgrey AOI_2_47 NC_010545.1_AOI_2 47597 47881 + MHSWLIFLILAVGAAVGAASSFHHYRHGDAALGRTTLLGTTLLGIPAVVILILILKDGPRSASTVELLGFAIYTFIVSIFVGTQFKRQPSTQPRx False lightgrey AOI_2_48 NC_010545.1_AOI_2 47850 48338 - ispF 4-cyclodiphosphate synthase,2-C-methyl-D-erythritol 2 False lightgrey AOI_2_49 NC_010545.1_AOI_2 48384 49181 - ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase False lightgrey AOI_2_50 NC_010545.1_AOI_2 49244 49816 - carD RNA polymerase-binding transcription factor CarD False lightgrey AOI_2_51 NC_010545.1_AOI_2 50139 50711 + yrrT Uncharacterized protein Cgl2664/cg2949 False lightgrey AOI_2_52 NC_010545.1_AOI_2 50847 52247 + radA DNA repair protein RadA ABC_tran PF00005.31 False #FF0000 Leader cleavage and transport AOI_2_53 NC_010545.1_AOI_2 52251 53018 - False lightgrey AOI_2_54 NC_010545.1_AOI_2 53168 53878 - mtcA2 Carbonic anhydrase 2 False lightgrey AOI_2_55 NC_010545.1_AOI_2 54070 55053 + mutY Adenine DNA glycosylase False lightgrey AOI_2_56 NC_010545.1_AOI_2 55243 56634 + brnQ Branched-chain amino acid permease BrnQ False lightgrey AOI_2_57 NC_010545.1_AOI_2 56719 58092 + False lightgrey AOI_2_58 NC_010545.1_AOI_2 58321 58479 - EFDAADFEVERGEEHHSPAEEAKASVASAAAGDVPEEDAAGESAGSEGKSEDx False lightgrey AOI_3_1 NC_010545.1_AOI_3 72 662 - thiX Thiamine biosynthesis protein X False lightgrey AOI_3_2 NC_010545.1_AOI_3 762 1811 + False lightgrey AOI_3_3 NC_010545.1_AOI_3 1801 2988 + hmuU Hemin transport system permease protein HmuU False lightgrey AOI_3_4 NC_010545.1_AOI_3 2988 3764 + hmuV Hemin import ATP-binding protein HmuV galliderm_ABC,ABC_tran PF00005.31,TIGR03740.1 False #FF0000 Leader cleavage and transport AOI_3_5 NC_010545.1_AOI_3 3787 4458 + hmuO Heme oxygenase False lightgrey AOI_3_6 NC_010545.1_AOI_3 4513 6012 - cysS Cysteine--tRNA ligase False lightgrey AOI_3_7 NC_010545.1_AOI_3 6175 7005 + yisK Uncharacterized protein YisK False lightgrey AOI_3_8 NC_010545.1_AOI_3 7124 7408 + MHSWLIFLILAVGAAVGAASSFHHYRHGDAALGRTTLLGTTLLGIPAVVILILILKDGPRSASTVELLGFAIYTFIVSIFVGTQFKRQPSTQPRx False lightgrey AOI_3_9 NC_010545.1_AOI_3 7377 7865 - ispF 4-cyclodiphosphate synthase,2-C-methyl-D-erythritol 2 False lightgrey AOI_3_10 NC_010545.1_AOI_3 7911 8708 - ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase False lightgrey AOI_3_11 NC_010545.1_AOI_3 8771 9343 - carD RNA polymerase-binding transcription factor CarD False lightgrey AOI_3_12 NC_010545.1_AOI_3 9666 10238 + yrrT Uncharacterized protein Cgl2664/cg2949 False lightgrey AOI_3_13 NC_010545.1_AOI_3 10374 11774 + radA DNA repair protein RadA ABC_tran PF00005.31 False #FF0000 Leader cleavage and transport AOI_3_14 NC_010545.1_AOI_3 11778 12398 - False lightgrey AOI_3_15 NC_010545.1_AOI_3 12695 13405 - mtcA2 Carbonic anhydrase 2 False lightgrey AOI_3_16 NC_010545.1_AOI_3 13597 14580 + mutY Adenine DNA glycosylase False lightgrey AOI_3_17 NC_010545.1_AOI_3 14770 16161 + brnQ Branched-chain amino acid permease BrnQ False lightgrey AOI_3_18 NC_010545.1_AOI_3 16246 17619 + False lightgrey AOI_3_19 NC_010545.1_AOI_3 17848 20532 - clpC1 ATP-dependent Clp protease ATP-binding subunit ClpC1 ABC_tran PF00005.31 False #FF0000 Leader cleavage and transport AOI_3_20 NC_010545.1_AOI_3 20934 22709 + menE 2-succinylbenzoate--CoA ligase False lightgrey AOI_3_21 NC_010545.1_AOI_3 22853 24460 - yfbV Putative phosphate permease Mb2302 False lightgrey AOI_3_22 NC_010545.1_AOI_3 24699 25904 - yngJ Probable acyl-CoA dehydrogenase YngJ False lightgrey AOI_3_23 NC_010545.1_AOI_3 25970 27439 - yngJ Probable acyl-CoA dehydrogenase YngJ False lightgrey AOI_3_24 NC_010545.1_AOI_3 27563 29110 - lysS Lysine--tRNA ligase False lightgrey AOI_3_25 NC_010545.1_AOI_3 29297 30505 - hmp Flavohemoprotein False lightgrey AOI_3_26 NC_010545.1_AOI_3 30543 31037 - nsrR HTH-type transcriptional repressor NsrR False lightgrey AOI_3_27 NC_010545.1_AOI_3 31181 31588 - panD Aspartate 1-decarboxylase False lightgrey AOI_3_28 NC_010545.1_AOI_3 31620 32612 - panC Pantothenate synthetase False lightgrey AOI_3_29 NC_010545.1_AOI_3 32618 33565 - False lightgrey AOI_3_30 NC_010545.1_AOI_3 33613 34830 - False lightgrey AOI_3_31 NC_010545.1_AOI_3 34857 35333 - False lightgrey AOI_3_32 NC_010545.1_AOI_3 35344 36012 - folK 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase False lightgrey AOI_3_33 NC_010545.1_AOI_3 36017 36394 - folB Dihydroneopterin aldolase False lightgrey AOI_3_34 NC_010545.1_AOI_3 36387 37340 - folP1 Dihydropteroate synthase False lightgrey AOI_3_35 NC_010545.1_AOI_3 37413 38027 - folE GTP cyclohydrolase 1 False lightgrey AOI_3_36 NC_010545.1_AOI_3 38048 40552 - ftsH ATP-dependent zinc metalloprotease FtsH False lightgrey AOI_3_37 NC_010545.1_AOI_3 40640 41242 - hpt Hypoxanthine-guanine phosphoribosyltransferase False lightgrey AOI_3_38 NC_010545.1_AOI_3 41235 42488 - tilS tRNA(Ile)-lysidine synthase False lightgrey AOI_3_39 NC_010545.1_AOI_3 42548 43924 - dacB Carboxypeptidase Rv3627c False lightgrey AOI_3_40 NC_010545.1_AOI_3 44068 44550 + ppa Inorganic pyrophosphatase False lightgrey AOI_3_41 NC_010545.1_AOI_3 44736 45503 + False lightgrey AOI_3_42 NC_010545.1_AOI_3 45643 46782 + False lightgrey AOI_3_43 NC_010545.1_AOI_3 46953 47390 + yqhL Uncharacterized protein YqhL False lightgrey AOI_3_44 NC_010545.1_AOI_3 47575 47832 + MKKHAFITVLAVVAVAAFIYLLAAPPAEFTALEGSTQLIILIVLFMVAEFPITILLIEKFVRGNREEAAKQQRTPSSDHLPRPTLx False lightgrey AOI_3_sORF_0001 NC_010545.1_AOI_3 47959 48157 + LQSLRSPNTRKPTTNSAKGAMRPYLHYTLSTRTSLTTALRCPHPVMEEPVAGFSLPPPRANVDSEP True lightgrey AOI_3_45 NC_010545.1_AOI_3 48186 49214 + yrpB Probable nitronate monooxygenase False lightgrey AOI_3_46 NC_010545.1_AOI_3 49334 50233 - ppk2B Polyphosphate kinase PPK2B False lightgrey AOI_3_47 NC_010545.1_AOI_3 50481 51155 + False lightgrey AOI_3_48 NC_010545.1_AOI_3 51424 51537 - MGNATFFFETMSNVAGWIDALSKLIGLLPNFLQAFGFx False lightgrey AOI_3_49 NC_010545.1_AOI_3 51676 51915 - MNVDMITTFLNDFSTFWKNIWEFLKPIFNIVQGKDNFGPVGKENDLKNLNELAKAFGKDPKVGEGYTPADKPAGSSENKx False lightgrey AOI_3_sORF_0002 NC_010545.1_AOI_3 52019 52271 - VALLHRGMCPSSVDDQVFLRKVRKYKSERLSGMLFICSEWVLPGWVSQVNCGLTSGDARSWKVAEGYKCDPFHMLAGNRYPLLT True lightgrey AOI_3_sORF_0003 NC_010545.1_AOI_3 52019 52223 - VFLRKVRKYKSERLSGMLFICSEWVLPGWVSQVNCGLTSGDARSWKVAEGYKCDPFHMLAGNRYPLLT True lightgrey AOI_3_50 NC_010545.1_AOI_3 52505 54148 - groEL1 Chaperonin GroEL 1 False lightgrey AOI_3_51 NC_010545.1_AOI_3 54185 55780 + tpdA Cysteinylglycine-S-conjugate dipeptidase False lightgrey AOI_3_52 NC_010545.1_AOI_3 55785 57713 + estA Carboxylesterase False lightgrey AOI_3_53 NC_010545.1_AOI_3 58080 58139 + MSTTLIRFAKPETSRREHKS False lightgrey