locus_tag chrom type start end strand product gene CoreName CoreHMM CoreBlast ContextName ContextHMM AOI_1_1 NZ_JAFMOF010000003.1_AOI_1 gene 1 240 + AOI_1_2 NZ_JAFMOF010000003.1_AOI_1 gene 295 750 + Ribosome-binding factor A rbfA AOI_1_3 NZ_JAFMOF010000003.1_AOI_1 gene 747 1649 + tRNA pseudouridine synthase B truB AOI_1_4 NZ_JAFMOF010000003.1_AOI_1 gene 1901 5191 + AOI_1_5 NZ_JAFMOF010000003.1_AOI_1 gene 5161 6666 + AOI_1_6 NZ_JAFMOF010000003.1_AOI_1 gene 6645 7532 + Bifunctional riboflavin kinase/FMN adenylyltransferase ribF AOI_1_7 NZ_JAFMOF010000003.1_AOI_1 gene 7609 10605 - Flagellum site-determining protein YlxH ylxH AOI_1_8 NZ_JAFMOF010000003.1_AOI_1 gene 10801 11535 - AOI_1_9 NZ_JAFMOF010000003.1_AOI_1 gene 11535 12821 - AOI_1_10 NZ_JAFMOF010000003.1_AOI_1 gene 13036 14604 + ESX-3 secretion system ATPase EccB3 eccB3 AOI_1_11 NZ_JAFMOF010000003.1_AOI_1 gene 14617 15864 + M-protease aprE Peptidase_S8 PF00082.26 AOI_1_11 NZ_JAFMOF010000003.1_AOI_1 gene 14617 15864 + M-protease aprE protease_PatA TIGR03895.1 AOI_1_12 NZ_JAFMOF010000003.1_AOI_1 gene 16131 17471 + AOI_1_13 NZ_JAFMOF010000003.1_AOI_1 gene 17528 18997 + AOI_1_14 NZ_JAFMOF010000003.1_AOI_1 gene 19058 19294 - AOI_1_15 NZ_JAFMOF010000003.1_AOI_1 gene 19487 19891 + AOI_1_16 NZ_JAFMOF010000003.1_AOI_1 gene 19949 20257 + AOI_1_17 NZ_JAFMOF010000003.1_AOI_1 gene 20362 24315 - ESX secretion system protein EccC eccC AOI_1_18 NZ_JAFMOF010000003.1_AOI_1 gene 24512 25948 + AOI_1_19 NZ_JAFMOF010000003.1_AOI_1 gene 26179 26466 + 30S ribosomal protein S15 rpsO AOI_1_20 NZ_JAFMOF010000003.1_AOI_1 gene 26779 28998 + Polyribonucleotide nucleotidyltransferase pnp AOI_1_21 NZ_JAFMOF010000003.1_AOI_1 gene 29016 29999 + Uncharacterized zinc protease SCO5738 metK1 AOI_2_1 NZ_JAFMOF010000003.1_AOI_2 gene 3 1910 + Vitamin B12-dependent ribonucleotide reductase nrdJ AOI_2_2 NZ_JAFMOF010000003.1_AOI_2 gene 2069 2422 - HTH-type transcriptional regulator HmrR hmrR AOI_2_3 NZ_JAFMOF010000003.1_AOI_2 gene 2450 3310 + AOI_2_4 NZ_JAFMOF010000003.1_AOI_2 gene 3433 4038 + AOI_2_5 NZ_JAFMOF010000003.1_AOI_2 gene 4147 4806 + 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase gpmA AOI_2_6 NZ_JAFMOF010000003.1_AOI_2 gene 4869 5711 + Uncharacterized protein AF_1724 acaA AOI_2_7 NZ_JAFMOF010000003.1_AOI_2 gene 5790 6491 + Ribonuclease HII rnhB AOI_2_8 NZ_JAFMOF010000003.1_AOI_2 gene 6688 7122 + AOI_2_9 NZ_JAFMOF010000003.1_AOI_2 gene 7178 7756 - AOI_2_10 NZ_JAFMOF010000003.1_AOI_2 gene 7980 10145 - Probable ATP-dependent DNA helicase RecQ recQ AOI_2_11 NZ_JAFMOF010000003.1_AOI_2 gene 10305 11798 + AOI_2_12 NZ_JAFMOF010000003.1_AOI_2 gene 12123 13943 + AOI_2_13 NZ_JAFMOF010000003.1_AOI_2 gene 14033 14794 + ADP-ribose pyrophosphatase nudF AOI_2_14 NZ_JAFMOF010000003.1_AOI_2 gene 14947 16713 + Nod factor export ATP-binding protein I nodI ABC_tran PF00005.31 AOI_2_14 NZ_JAFMOF010000003.1_AOI_2 gene 14947 16713 + Nod factor export ATP-binding protein I nodI galliderm_ABC TIGR03740.1 AOI_2_14 NZ_JAFMOF010000003.1_AOI_2 gene 14947 16713 + Nod factor export ATP-binding protein I nodI galliderm_ABC TIGR03740.1 AOI_2_sORF_0001 NZ_JAFMOF010000003.1_AOI_2 sORF 16717 16942 + AOI_2_15 NZ_JAFMOF010000003.1_AOI_2 gene 16964 17827 + Probable D-xylose utilization operon transcriptional repressor gntR AOI_2_16 NZ_JAFMOF010000003.1_AOI_2 gene 18211 19770 + RNA polymerase principal sigma factor HrdB hrdB AOI_2_17 NZ_JAFMOF010000003.1_AOI_2 gene 19924 20862 + Trypsin trxB AOI_2_18 NZ_JAFMOF010000003.1_AOI_2 gene 21014 21244 - AOI_2_sORF_0002 NZ_JAFMOF010000003.1_AOI_2 sORF 21364 21607 + AOI_2_sORF_0001 NZ_JAFMOF010000003.1_AOI_2 sORF 21408 21633 - AOI_2_19 NZ_JAFMOF010000003.1_AOI_2 gene 21678 23798 + DNA gyrase subunit B gyrB AOI_2_20 NZ_JAFMOF010000003.1_AOI_2 gene 24005 24514 + AOI_2_21 NZ_JAFMOF010000003.1_AOI_2 gene 24511 26106 + Monocarboxylic acid transporter mctC AOI_2_22 NZ_JAFMOF010000003.1_AOI_2 gene 26137 26817 - Probable C4-dicarboxylate response regulator DctR dctR Response_reg PF00072.28 AOI_2_23 NZ_JAFMOF010000003.1_AOI_2 gene 26814 28445 - Sensor protein CitS citS HATPase_c_2 PF13581.10 AOI_2_24 NZ_JAFMOF010000003.1_AOI_2 gene 28743 29597 + Uncharacterized ABC transporter ATP-binding protein MJ0412 cbiM ABC_tran PF00005.31 AOI_2_24 NZ_JAFMOF010000003.1_AOI_2 gene 28743 29597 + Uncharacterized ABC transporter ATP-binding protein MJ0412 cbiM galliderm_ABC TIGR03740.1 AOI_2_24 NZ_JAFMOF010000003.1_AOI_2 gene 28743 29597 + Uncharacterized ABC transporter ATP-binding protein MJ0412 cbiM galliderm_ABC TIGR03740.1 AOI_2_25 NZ_JAFMOF010000003.1_AOI_2 gene 29587 30462 + Uncharacterized ABC transporter permease protein YtlD ytlD AOI_2_26 NZ_JAFMOF010000003.1_AOI_2 gene 30528 31592 + AOI_2_27 NZ_JAFMOF010000003.1_AOI_2 gene 31618 32541 - AOI_2_28 NZ_JAFMOF010000003.1_AOI_2 gene 32715 33755 + Zinc chaperone P47K p46 ABC_tran PF00005.31 AOI_2_29 NZ_JAFMOF010000003.1_AOI_2 gene 33839 36295 - DNA gyrase subunit A gyrA AOI_2_30 NZ_JAFMOF010000003.1_AOI_2 gene 36512 37867 + Probable zinc protease PqqL pqqL AOI_2_31 NZ_JAFMOF010000003.1_AOI_2 gene 37864 39276 + AOI_2_32 NZ_JAFMOF010000003.1_AOI_2 gene 39710 40495 + Glycyl-glycine endopeptidase ALE-1 ald 3.59 AOI_2_33 NZ_JAFMOF010000003.1_AOI_2 gene 40773 41438 + Gluconate operon transcriptional repressor gntR AOI_2_34 NZ_JAFMOF010000003.1_AOI_2 gene 41598 41879 - Phosphocarrier protein HPr ptsH AOI_2_35 NZ_JAFMOF010000003.1_AOI_2 gene 42034 44802 + Acetate--CoA ligase [ADP-forming] I acaC AOI_2_36 NZ_JAFMOF010000003.1_AOI_2 gene 44878 45465 + AOI_2_37 NZ_JAFMOF010000003.1_AOI_2 gene 45465 46673 + AOI_2_38 NZ_JAFMOF010000003.1_AOI_2 gene 46786 47445 + Thymidine kinase tdk AOI_2_39 NZ_JAFMOF010000003.1_AOI_2 gene 47468 48265 - Anthracycline biosynthesis protein DnrV dnrV AOI_2_40 NZ_JAFMOF010000003.1_AOI_2 gene 48460 49296 + Putative thiosulfate sulfurtransferase SseB sseB AOI_2_41 NZ_JAFMOF010000003.1_AOI_2 gene 49366 50427 - Uncharacterized protein Mb0907c fadE10 AOI_2_42 NZ_JAFMOF010000003.1_AOI_2 gene 50830 51837 + AOI_2_43 NZ_JAFMOF010000003.1_AOI_2 gene 51848 53164 - L-gulono-1,4-lactone dehydrogenase gufA AOI_2_44 NZ_JAFMOF010000003.1_AOI_2 gene 53127 54368 - AOI_2_45 NZ_JAFMOF010000003.1_AOI_2 gene 54513 55088 + Coproporphyrin III ferrochelatase cpfC