locus_tag chrom type start end strand product gene CoreName CoreHMM CoreBlast ContextName ContextHMM AOI_1_1 NC_010296.1_AOI_1 gene 1 1404 + UvrABC system protein C uvrC AOI_1_2 NC_010296.1_AOI_1 gene 1474 1674 - AOI_1_3 NC_010296.1_AOI_1 gene 1904 3496 + AOI_1_4 NC_010296.1_AOI_1 gene 3743 4381 + AOI_1_5 NC_010296.1_AOI_1 gene 4535 4828 + AOI_1_6 NC_010296.1_AOI_1 gene 4831 5349 + Putative low molecular weight protein-tyrosine-phosphatase slr0328 ygfB AOI_1_7 NC_010296.1_AOI_1 gene 5364 6020 - Response regulator Rre1 rre1 Response_reg PF00072.28 AOI_1_8 NC_010296.1_AOI_1 gene 6192 7307 + High-affinity branched-chain amino acid transport system permease protein BraE braE AOI_1_9 NC_010296.1_AOI_1 gene 7589 8341 + High-affinity branched-chain amino acid transport ATP-binding protein BraF braF ABC_tran PF00005.31 AOI_1_9 NC_010296.1_AOI_1 gene 7589 8341 + High-affinity branched-chain amino acid transport ATP-binding protein BraF braF galliderm_ABC TIGR03740.1 AOI_1_9 NC_010296.1_AOI_1 gene 7589 8341 + High-affinity branched-chain amino acid transport ATP-binding protein BraF braF galliderm_ABC TIGR03740.1 AOI_1_9 NC_010296.1_AOI_1 gene 7589 8341 + High-affinity branched-chain amino acid transport ATP-binding protein BraF braF galliderm_ABC TIGR03740.1 AOI_1_9 NC_010296.1_AOI_1 gene 7589 8341 + High-affinity branched-chain amino acid transport ATP-binding protein BraF braF galliderm_ABC TIGR03740.1 AOI_1_10 NC_010296.1_AOI_1 gene 8330 8968 - Imidazole glycerol phosphate synthase subunit HisH hisH AOI_1_11 NC_010296.1_AOI_1 gene 9317 9700 + AOI_1_12 NC_010296.1_AOI_1 gene 10236 10814 + AOI_1_13 NC_010296.1_AOI_1 gene 10832 11491 + AOI_1_14 NC_010296.1_AOI_1 gene 11575 12387 + AOI_1_15 NC_010296.1_AOI_1 gene 12394 12744 + AOI_1_16 NC_010296.1_AOI_1 gene 12792 13025 - AOI_1_17 NC_010296.1_AOI_1 gene 13093 14307 - Transposase for insertion sequence element IS1001 tnpA AOI_1_18 NC_010296.1_AOI_1 gene 14457 14702 - AOI_1_sORF_0001 NC_010296.1_AOI_1 sORF 14738 14963 + AOI_1_19 NC_010296.1_AOI_1 gene 14998 15183 + 1.7.100 AOI_1_20 NC_010296.1_AOI_1 gene 15475 15759 + AOI_1_21 NC_010296.1_AOI_1 gene 15759 16055 + AOI_1_22 NC_010296.1_AOI_1 gene 16259 16414 + 1.7.101 AOI_1_sORF_0002 NC_010296.1_AOI_1 sORF 16452 16650 - AOI_1_23 NC_010296.1_AOI_1 gene 16763 17155 + AOI_1_24 NC_010296.1_AOI_1 gene 17152 17595 + AOI_1_25 NC_010296.1_AOI_1 gene 17629 18525 + preny_LynF_TruF TIGR04445.1 AOI_1_25 NC_010296.1_AOI_1 gene 17629 18525 + preny_LynF_TruF TIGR04445.1 AOI_1_26 NC_010296.1_AOI_1 gene 18605 18937 + AOI_1_27 NC_010296.1_AOI_1 gene 18934 19602 + AOI_1_28 NC_010296.1_AOI_1 gene 19645 20091 + AOI_1_29 NC_010296.1_AOI_1 gene 20127 20696 + AOI_1_30 NC_010296.1_AOI_1 gene 20725 21099 + Peptidase_S8 PF00082.26 AOI_1_30 NC_010296.1_AOI_1 gene 20725 21099 + protease_PatA TIGR03895.1 AOI_1_31 NC_010296.1_AOI_1 gene 21453 23111 - AOI_1_32 NC_010296.1_AOI_1 gene 23398 24885 - AOI_1_33 NC_010296.1_AOI_1 gene 24969 25157 + AOI_1_34 NC_010296.1_AOI_1 gene 25589 26506 + Intracellular alkaline protease uppS Radical_SAM PF04055.25 AOI_1_34 NC_010296.1_AOI_1 gene 25589 26506 + Intracellular alkaline protease uppS Peptidase_S8 PF00082.26 AOI_1_34 NC_010296.1_AOI_1 gene 25589 26506 + Intracellular alkaline protease uppS protease_PatA TIGR03895.1 AOI_1_35 NC_010296.1_AOI_1 gene 26876 27142 + AOI_1_36 NC_010296.1_AOI_1 gene 27687 28802 + Probable transposase for insertion sequence element IS701 bcgIB AOI_1_37 NC_010296.1_AOI_1 gene 28835 29905 + protease_PatA TIGR03895.1 AOI_1_38 NC_010296.1_AOI_1 gene 29986 30243 + AOI_1_39 NC_010296.1_AOI_1 gene 30367 31326 + AOI_1_40 NC_010296.1_AOI_1 gene 31471 31626 + 1.7.103 AOI_1_41 NC_010296.1_AOI_1 gene 31698 32489 - AOI_1_42 NC_010296.1_AOI_1 gene 32557 33066 + Peptidase_S8 PF00082.26 AOI_1_42 NC_010296.1_AOI_1 gene 32557 33066 + protease_PatA TIGR03895.1 AOI_1_43 NC_010296.1_AOI_1 gene 33033 34652 + Peptidase_S8 PF00082.26 AOI_1_43 NC_010296.1_AOI_1 gene 33033 34652 + protease_PatA TIGR03895.1 AOI_1_44 NC_010296.1_AOI_1 gene 34943 35968 + 1-deoxyxylulose-5-phosphate synthase YajO yajO AOI_1_45 NC_010296.1_AOI_1 gene 35968 36372 + AOI_1_46 NC_010296.1_AOI_1 gene 36432 36632 + AOI_1_47 NC_010296.1_AOI_1 gene 36979 38022 + Putative RNA-guided DNA endonuclease ysmB AOI_1_48 NC_010296.1_AOI_1 gene 38217 39002 + Type II methyltransferase M.AgeI ageIM AOI_1_49 NC_010296.1_AOI_1 gene 38977 39468 - AOI_1_50 NC_010296.1_AOI_1 gene 39902 40144 - AOI_1_51 NC_010296.1_AOI_1 gene 40343 40855 + AOI_1_52 NC_010296.1_AOI_1 gene 40891 41565 + AOI_1_53 NC_010296.1_AOI_1 gene 41750 41971 - Control protein C.SmaI ysmA AOI_1_54 NC_010296.1_AOI_1 gene 42124 43482 + GTPase Der der ABC_tran PF00005.31 AOI_1_54 NC_010296.1_AOI_1 gene 42124 43482 + GTPase Der der ABC_tran PF00005.31 AOI_1_55 NC_010296.1_AOI_1 gene 43486 44361 + Ycf92-like protein ybzI AOI_1_sORF_0001 NC_010296.1_AOI_1 sORF 44647 44836 - AOI_1_56 NC_010296.1_AOI_1 gene 45075 47651 + AOI_1_57 NC_010296.1_AOI_1 gene 47889 48053 - AOI_2_1 NC_010296.1_AOI_2 gene 225 473 + AOI_2_2 NC_010296.1_AOI_2 gene 703 1860 + AOI_2_3 NC_010296.1_AOI_2 gene 1930 2481 - AOI_2_4 NC_010296.1_AOI_2 gene 2493 2879 - AOI_2_5 NC_010296.1_AOI_2 gene 2967 3320 + AOI_2_6 NC_010296.1_AOI_2 gene 3718 4611 - Probable transposase for insertion sequence element IS702 bcgIB AOI_2_7 NC_010296.1_AOI_2 gene 4762 4998 + AOI_2_8 NC_010296.1_AOI_2 gene 5001 5240 + AOI_2_9 NC_010296.1_AOI_2 gene 5360 5713 - AOI_2_10 NC_010296.1_AOI_2 gene 5706 6044 - AOI_2_11 NC_010296.1_AOI_2 gene 6133 6420 - AOI_2_12 NC_010296.1_AOI_2 gene 6401 6691 - AOI_2_13 NC_010296.1_AOI_2 gene 7074 7427 - AOI_2_14 NC_010296.1_AOI_2 gene 7420 7758 - AOI_2_15 NC_010296.1_AOI_2 gene 7937 9499 - Uncharacterized protein sll0772 metK1 AOI_2_16 NC_010296.1_AOI_2 gene 9945 10658 - AOI_2_17 NC_010296.1_AOI_2 gene 10857 11441 - AOI_2_18 NC_010296.1_AOI_2 gene 11685 12248 - Thylakoid membrane protein slr1796 eep AOI_2_19 NC_010296.1_AOI_2 gene 12297 12791 + Chaperone protein DnaJ dnaJ AOI_2_20 NC_010296.1_AOI_2 gene 12797 13069 + AOI_2_21 NC_010296.1_AOI_2 gene 13528 13794 - AOI_2_22 NC_010296.1_AOI_2 gene 14089 15066 - Radical_SAM PF04055.25 AOI_2_22 NC_010296.1_AOI_2 gene 14089 15066 - rSAM_yydG TIGR04078.1 AOI_2_23 NC_010296.1_AOI_2 gene 15383 16357 - Arsenite methyltransferase arsM AOI_2_24 NC_010296.1_AOI_2 gene 16758 17636 + AOI_2_25 NC_010296.1_AOI_2 gene 17649 17909 - AOI_2_26 NC_010296.1_AOI_2 gene 18212 18598 - AOI_2_sORF_0001 NC_010296.1_AOI_2 sORF 18620 18938 + AOI_2_27 NC_010296.1_AOI_2 gene 19320 20375 + Putative RNA-guided DNA endonuclease ysmB AOI_2_sORF_0002 NC_010296.1_AOI_2 sORF 20463 20754 + AOI_2_sORF_0001 NC_010296.1_AOI_2 sORF 20534 20720 - AOI_2_28 NC_010296.1_AOI_2 gene 20781 21287 - AOI_2_29 NC_010296.1_AOI_2 gene 21494 22576 - Photosystem II protein D1 psbA5 AOI_2_30 NC_010296.1_AOI_2 gene 22756 23172 + Peptide methionine sulfoxide reductase MsrB msrB AOI_2_31 NC_010296.1_AOI_2 gene 23225 23428 - Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core apcC AOI_2_sORF_0003 NC_010296.1_AOI_2 sORF 23558 23792 + AOI_2_32 NC_010296.1_AOI_2 gene 24003 24488 - Allophycocyanin beta chain apcB1 AOI_2_33 NC_010296.1_AOI_2 gene 24568 25053 - Allophycocyanin alpha chain apcA AOI_2_34 NC_010296.1_AOI_2 gene 25378 26007 - Holliday junction ATP-dependent DNA helicase RuvA ruvA AOI_2_35 NC_010296.1_AOI_2 gene 26092 27300 + Putative zinc metalloprotease sll0528 cyp127A1 AOI_2_36 NC_010296.1_AOI_2 gene 27392 28540 - Spermidine/putrescine-binding periplasmic protein potD AOI_2_37 NC_010296.1_AOI_2 gene 28761 28928 + AOI_2_38 NC_010296.1_AOI_2 gene 28925 30004 - AOI_3_1 NC_010296.1_AOI_3 gene 2 1999 - Cyanobacterial phytochrome A aphA HisKA PF00512.29 AOI_3_2 NC_010296.1_AOI_3 gene 2388 2669 - AOI_3_3 NC_010296.1_AOI_3 gene 2666 2890 - AOI_3_4 NC_010296.1_AOI_3 gene 3192 5243 - Oligopeptidase A prlC AOI_3_5 NC_010296.1_AOI_3 gene 5283 5444 - AOI_3_6 NC_010296.1_AOI_3 gene 5912 6946 - Zinc chaperone CobW cobW ABC_tran PF00005.31 AOI_3_7 NC_010296.1_AOI_3 gene 7150 7338 + AOI_3_8 NC_010296.1_AOI_3 gene 7672 9579 - Capsular polysaccharide biosynthesis protein CapD capD AOI_3_9 NC_010296.1_AOI_3 gene 10140 11651 + All-trans-zeta-carotene desaturase carC FAD_binding_3 PF01494.23 AOI_3_10 NC_010296.1_AOI_3 gene 11866 13545 + Uncharacterized protein sll0095 fadA AOI_3_11 NC_010296.1_AOI_3 gene 14071 21675 + Thermophilic serine proteinase nprS Peptidase_S8 PF00082.26 AOI_3_11 NC_010296.1_AOI_3 gene 14071 21675 + Thermophilic serine proteinase nprS protease_PatA TIGR03895.1 AOI_3_sORF_0001 NC_010296.1_AOI_3 sORF 22014 22251 + AOI_3_12 NC_010296.1_AOI_3 gene 22767 27857 + Extracellular subtilisin-like protease bprV Peptidase_S8 PF00082.26 AOI_3_12 NC_010296.1_AOI_3 gene 22767 27857 + Extracellular subtilisin-like protease bprV protease_PatA TIGR03895.1 AOI_3_13 NC_010296.1_AOI_3 gene 28494 29174 - AOI_3_14 NC_010296.1_AOI_3 gene 29298 30353 + Sulfate/thiosulfate import ATP-binding protein CysA 2 cysA2 ABC_tran PF00005.31 AOI_3_14 NC_010296.1_AOI_3 gene 29298 30353 + Sulfate/thiosulfate import ATP-binding protein CysA 2 cysA2 galliderm_ABC TIGR03740.1 AOI_3_14 NC_010296.1_AOI_3 gene 29298 30353 + Sulfate/thiosulfate import ATP-binding protein CysA 2 cysA2 galliderm_ABC TIGR03740.1 AOI_3_15 NC_010296.1_AOI_3 gene 30542 31447 - Probable alpha-L-glutamate ligase rimK ATPgraspMvdD TIGR04184.1 AOI_3_15 NC_010296.1_AOI_3 gene 30542 31447 - Probable alpha-L-glutamate ligase rimK ATPgraspMvdC TIGR04185.1 AOI_3_15 NC_010296.1_AOI_3 gene 30542 31447 - Probable alpha-L-glutamate ligase rimK ATPgraspMvdD TIGR04184.1 AOI_3_15 NC_010296.1_AOI_3 gene 30542 31447 - Probable alpha-L-glutamate ligase rimK ATPgraspMvdC TIGR04185.1 AOI_3_16 NC_010296.1_AOI_3 gene 31909 35109 - AOI_3_17 NC_010296.1_AOI_3 gene 35304 35762 - AOI_3_18 NC_010296.1_AOI_3 gene 35701 35961 - AOI_3_19 NC_010296.1_AOI_3 gene 36086 37120 - AOI_3_20 NC_010296.1_AOI_3 gene 37383 37994 + AOI_3_21 NC_010296.1_AOI_3 gene 38151 38750 + AOI_3_22 NC_010296.1_AOI_3 gene 38769 39191 + AOI_3_23 NC_010296.1_AOI_3 gene 39414 40427 + Probable dual-specificity RNA methyltransferase RlmN rlmN Radical_SAM PF04055.25 AOI_3_24 NC_010296.1_AOI_3 gene 40516 40740 + Ferredoxin--NADP reductase petH AOI_3_25 NC_010296.1_AOI_3 gene 41029 42228 + Ferredoxin--NADP reductase petH AOI_3_26 NC_010296.1_AOI_3 gene 42436 43278 + AOI_3_27 NC_010296.1_AOI_3 gene 43371 44246 + 3'(2'),5'-bisphosphate nucleotidase CysQ cysQ AOI_3_28 NC_010296.1_AOI_3 gene 44481 46352 + Uncharacterized protein YfjP yfjP ABC_tran PF00005.31 AOI_3_sORF_0002 NC_010296.1_AOI_3 sORF 46727 46964 + AOI_3_29 NC_010296.1_AOI_3 gene 47046 47594 - AOI_3_30 NC_010296.1_AOI_3 gene 47563 47829 - AOI_3_31 NC_010296.1_AOI_3 gene 48006 48185 - AOI_3_32 NC_010296.1_AOI_3 gene 48763 48969 - AOI_3_33 NC_010296.1_AOI_3 gene 49764 49961 + AOI_3_34 NC_010296.1_AOI_3 gene 50113 50229 - AOI_3_35 NC_010296.1_AOI_3 gene 50416 51258 - Cis-3-alkyl-4-alkyloxetan-2-one decarboxylase oleB AOI_3_36 NC_010296.1_AOI_3 gene 51340 52161 - Phosphoadenosine 5'-phosphosulfate reductase cysH AOI_3_sORF_0003 NC_010296.1_AOI_3 sORF 52269 52452 + AOI_3_37 NC_010296.1_AOI_3 gene 52579 53043 - AOI_3_38 NC_010296.1_AOI_3 gene 53241 54020 - ABC2_membrane_2 PF12679.11 AOI_3_38 NC_010296.1_AOI_3 gene 53241 54020 - ABC2_membrane_4 PF12730.11 AOI_4_1 NC_010296.1_AOI_4 gene 3 755 + Pyridoxine 5'-phosphate synthase pdxJ AOI_4_2 NC_010296.1_AOI_4 gene 823 1134 + Ycf54-like protein ybzI AOI_4_3 NC_010296.1_AOI_4 gene 1354 2982 - ComE operon protein 1 comEA AOI_4_4 NC_010296.1_AOI_4 gene 3342 5768 + AOI_4_5 NC_010296.1_AOI_4 gene 5975 6838 + Chaperone protein LppX lppX AOI_4_6 NC_010296.1_AOI_4 gene 6863 7114 + AOI_4_7 NC_010296.1_AOI_4 gene 7276 7875 + Uncharacterized protein slr1290 radC AOI_4_8 NC_010296.1_AOI_4 gene 7925 8809 + AOI_4_9 NC_010296.1_AOI_4 gene 8833 9681 - AOI_4_10 NC_010296.1_AOI_4 gene 9884 10084 - AOI_4_11 NC_010296.1_AOI_4 gene 10081 11355 - AOI_4_12 NC_010296.1_AOI_4 gene 11357 12184 - AOI_4_13 NC_010296.1_AOI_4 gene 12282 13226 + Renalase rnlB FAD_binding_3 PF01494.23 AOI_4_14 NC_010296.1_AOI_4 gene 13325 13579 + AOI_4_15 NC_010296.1_AOI_4 gene 13813 15876 + Uncharacterized ABC transporter ATP-binding protein sll0182 eep ABC_tran PF00005.31 AOI_4_15 NC_010296.1_AOI_4 gene 13813 15876 + Uncharacterized ABC transporter ATP-binding protein sll0182 eep galliderm_ABC TIGR03740.1 AOI_4_15 NC_010296.1_AOI_4 gene 13813 15876 + Uncharacterized ABC transporter ATP-binding protein sll0182 eep galliderm_ABC TIGR03740.1 AOI_4_16 NC_010296.1_AOI_4 gene 16023 16556 + AOI_4_17 NC_010296.1_AOI_4 gene 16820 17794 - ATPgraspMvdD TIGR04184.1 AOI_4_17 NC_010296.1_AOI_4 gene 16820 17794 - ATPgraspMvdC TIGR04185.1 AOI_4_17 NC_010296.1_AOI_4 gene 16820 17794 - ATPgraspMvdD TIGR04184.1 AOI_4_17 NC_010296.1_AOI_4 gene 16820 17794 - ATPgraspMvdC TIGR04185.1 AOI_4_18 NC_010296.1_AOI_4 gene 17848 18828 - ATPgraspMvdD TIGR04184.1 AOI_4_18 NC_010296.1_AOI_4 gene 17848 18828 - ATPgraspMvdC TIGR04185.1 AOI_4_18 NC_010296.1_AOI_4 gene 17848 18828 - ATPgraspMvdD TIGR04184.1 AOI_4_18 NC_010296.1_AOI_4 gene 17848 18828 - ATPgraspMvdC TIGR04185.1 AOI_4_19 NC_010296.1_AOI_4 gene 19107 19259 - 1.12.007 AOI_4_20 NC_010296.1_AOI_4 gene 19914 21194 - Peptidoglycan glycosyltransferase RodA rodA AOI_4_21 NC_010296.1_AOI_4 gene 21413 22474 - Iron-sulfur cluster carrier protein mrp AOI_4_22 NC_010296.1_AOI_4 gene 22784 23575 - Uncharacterized protein YcbX ycbX AOI_4_23 NC_010296.1_AOI_4 gene 23562 24839 - AOI_4_24 NC_010296.1_AOI_4 gene 24836 25984 - AOI_4_25 NC_010296.1_AOI_4 gene 26027 27343 - 1-carboxybiuret hydrolase subunit AtzE atzE AOI_4_26 NC_010296.1_AOI_4 gene 27340 27516 - AOI_4_27 NC_010296.1_AOI_4 gene 27932 29533 + Uncharacterized protein MJ0966 cbiM Radical_SAM PF04055.25 AOI_4_28 NC_010296.1_AOI_4 gene 29727 31142 + AOI_4_29 NC_010296.1_AOI_4 gene 31312 32037 + N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase tarA AOI_4_30 NC_010296.1_AOI_4 gene 32047 32640 - Urease accessory protein UreG ureG ABC_tran PF00005.31 AOI_4_31 NC_010296.1_AOI_4 gene 32816 33403 - Nucleoside triphosphate pyrophosphatase maf2 AOI_4_32 NC_010296.1_AOI_4 gene 33541 33951 - AOI_4_33 NC_010296.1_AOI_4 gene 34224 34772 - AOI_4_34 NC_010296.1_AOI_4 gene 34835 35617 + AOI_4_35 NC_010296.1_AOI_4 gene 35692 35871 - AOI_4_36 NC_010296.1_AOI_4 gene 36227 37276 - Type II methyltransferase M.ScaI scaIM AOI_4_37 NC_010296.1_AOI_4 gene 37514 38524 - Tryptophan--tRNA ligase trpS AOI_4_38 NC_010296.1_AOI_4 gene 38586 39899 - AOI_4_39 NC_010296.1_AOI_4 gene 39913 40542 - AOI_4_40 NC_010296.1_AOI_4 gene 40577 42625 - AOI_4_41 NC_010296.1_AOI_4 gene 42669 43448 - AOI_4_42 NC_010296.1_AOI_4 gene 43520 43612 - AOI_5_1 NC_010296.1_AOI_5 gene 2 1912 + Tyrosine-protein kinase YwqD ywqD AOI_5_2 NC_010296.1_AOI_5 gene 2104 3561 + Cryptochrome DASH cry AOI_5_3 NC_010296.1_AOI_5 gene 3892 4851 - Quinolinate synthase nadA AOI_5_4 NC_010296.1_AOI_5 gene 5073 5834 + Sec-independent protein translocase protein TatC tatC AOI_5_5 NC_010296.1_AOI_5 gene 5913 6224 + AOI_5_6 NC_010296.1_AOI_5 gene 6610 8136 + Photosystem II CP47 reaction center protein psbB AOI_5_7 NC_010296.1_AOI_5 gene 8509 8628 - Photosystem II reaction center protein J psbJ AOI_5_8 NC_010296.1_AOI_5 gene 8671 8790 - Photosystem II reaction center protein L psbL AOI_5_9 NC_010296.1_AOI_5 gene 8801 8935 - Cytochrome b559 subunit beta psbF AOI_5_10 NC_010296.1_AOI_5 gene 8961 9206 - Cytochrome b559 subunit alpha psbE AOI_5_11 NC_010296.1_AOI_5 gene 9285 10277 - Photosystem II assembly lipoprotein Ycf48 ycf48 AOI_5_12 NC_010296.1_AOI_5 gene 10384 10731 - Rubredoxin rub AOI_5_13 NC_010296.1_AOI_5 gene 11329 11715 + LynD-like AOI_5_14 NC_010296.1_AOI_5 gene 11769 12818 + AOI_5_15 NC_010296.1_AOI_5 gene 12846 13703 - AOI_5_16 NC_010296.1_AOI_5 gene 13700 13909 - AOI_5_17 NC_010296.1_AOI_5 gene 14197 16128 + YcaO PF02624.20 AOI_5_17 NC_010296.1_AOI_5 gene 14197 16128 + TIGR00702 TIGR00702.1 AOI_5_17 NC_010296.1_AOI_5 gene 14197 16128 + TIGR00702 TIGR00702.1 AOI_5_18 NC_010296.1_AOI_5 gene 16246 16590 - Lectin MVL mvl AOI_5_19 NC_010296.1_AOI_5 gene 16947 17138 + YcaO PF02624.20 AOI_5_20 NC_010296.1_AOI_5 gene 17173 17472 - AOI_5_21 NC_010296.1_AOI_5 gene 17475 17819 - AOI_5_22 NC_010296.1_AOI_5 gene 18141 18524 - AOI_5_23 NC_010296.1_AOI_5 gene 18521 18739 - AOI_5_24 NC_010296.1_AOI_5 gene 18756 18977 - AOI_5_25 NC_010296.1_AOI_5 gene 19333 20034 + AOI_5_26 NC_010296.1_AOI_5 gene 20057 20269 + AOI_5_27 NC_010296.1_AOI_5 gene 20588 20860 - AOI_5_28 NC_010296.1_AOI_5 gene 20838 21125 - AOI_5_sORF_0002 NC_010296.1_AOI_5 sORF 21131 21320 - AOI_5_29 NC_010296.1_AOI_5 gene 21384 22067 - AOI_5_30 NC_010296.1_AOI_5 gene 22214 23311 - AOI_5_31 NC_010296.1_AOI_5 gene 23983 24198 + AOI_5_32 NC_010296.1_AOI_5 gene 24722 25615 - Probable transposase for insertion sequence element IS702 bcgIB AOI_5_33 NC_010296.1_AOI_5 gene 25704 25958 - AOI_5_34 NC_010296.1_AOI_5 gene 25942 26139 - AOI_5_35 NC_010296.1_AOI_5 gene 26288 27364 - AOI_5_36 NC_010296.1_AOI_5 gene 27474 28517 + AOI_5_37 NC_010296.1_AOI_5 gene 28514 29269 - Group II intron-encoded protein LtrA ltrA AOI_5_sORF_0001 NC_010296.1_AOI_5 sORF 29860 30049 + AOI_5_38 NC_010296.1_AOI_5 gene 30262 31080 + AOI_5_39 NC_010296.1_AOI_5 gene 31156 33258 + AOI_5_40 NC_010296.1_AOI_5 gene 33273 38984 + Uncharacterized WD repeat-containing protein slr0143 fabG2 Pkinase PF00069.29 AOI_5_41 NC_010296.1_AOI_5 gene 39006 40343 - AOI_5_sORF_0002 NC_010296.1_AOI_5 sORF 40538 40745 + AOI_5_42 NC_010296.1_AOI_5 gene 40790 42001 - TPR repeat-containing protein Synpcc7942_0270 yrrT Glycos_transf_2 PF00535.30 AOI_5_43 NC_010296.1_AOI_5 gene 42075 44753 - Methyl-accepting chemotaxis protein McpP mcpP AOI_5_44 NC_010296.1_AOI_5 gene 44843 45373 - AOI_5_45 NC_010296.1_AOI_5 gene 45465 45830 - DNA-binding response regulator MtrA mtrA Response_reg PF00072.28 AOI_5_sORF_0001 NC_010296.1_AOI_5 sORF 46121 46331 - AOI_5_46 NC_010296.1_AOI_5 gene 47440 48771 + AOI_5_47 NC_010296.1_AOI_5 gene 48750 50390 + AOI_5_sORF_0003 NC_010296.1_AOI_5 sORF 50402 50591 + AOI_5_48 NC_010296.1_AOI_5 gene 50854 50976 + AOI_5_49 NC_010296.1_AOI_5 gene 51089 51313 + AOI_5_50 NC_010296.1_AOI_5 gene 51583 52392 + 15-cis-phytoene synthase crtB AOI_5_51 NC_010296.1_AOI_5 gene 52480 52962 - Cytochrome b6-f complex subunit 4 petD AOI_5_52 NC_010296.1_AOI_5 gene 53014 53682 - Cytochrome b6 petB AOI_5_53 NC_010296.1_AOI_5 gene 53965 54444 + Putative resolvase R771 yosX AOI_5_54 NC_010296.1_AOI_5 gene 54545 55609 + TnpB-like protein L79 K1 AOI_5_55 NC_010296.1_AOI_5 gene 55609 56985 + Uncharacterized protein sll0335 ybaB AOI_6_1 NC_010296.1_AOI_6 gene 2 892 + Putative RNA-guided DNA endonuclease ysmB AOI_6_2 NC_010296.1_AOI_6 gene 1353 2318 + Uncharacterized protein SF2094/S2216 vclB Glycos_transf_2 PF00535.30 AOI_6_3 NC_010296.1_AOI_6 gene 2364 2729 - AOI_6_sORF_0001 NC_010296.1_AOI_6 sORF 2771 2963 - AOI_6_4 NC_010296.1_AOI_6 gene 3208 4425 - AOI_6_5 NC_010296.1_AOI_6 gene 4428 4997 - Uncharacterized protein Mb2910c yrrT AOI_6_6 NC_010296.1_AOI_6 gene 5385 6830 - Precorrin-3B C(17)-methyltransferase cobJ AOI_6_7 NC_010296.1_AOI_6 gene 6827 7693 - AOI_6_8 NC_010296.1_AOI_6 gene 7927 8634 + AOI_6_9 NC_010296.1_AOI_6 gene 8606 8770 + AOI_6_10 NC_010296.1_AOI_6 gene 8801 9232 + AOI_6_11 NC_010296.1_AOI_6 gene 9306 11507 - AOI_6_12 NC_010296.1_AOI_6 gene 12091 12315 + AOI_6_13 NC_010296.1_AOI_6 gene 12312 12644 + AOI_6_14 NC_010296.1_AOI_6 gene 12860 12958 - AOI_6_15 NC_010296.1_AOI_6 gene 12955 13254 - AOI_6_16 NC_010296.1_AOI_6 gene 13462 13668 - AOI_6_17 NC_010296.1_AOI_6 gene 14184 14933 + Probable endolytic peptidoglycan transglycosylase RlpA rlpA AOI_6_18 NC_010296.1_AOI_6 gene 14995 15696 + High-affinity branched-chain amino acid transport ATP-binding protein BraG braG ABC_tran PF00005.31 AOI_6_18 NC_010296.1_AOI_6 gene 14995 15696 + High-affinity branched-chain amino acid transport ATP-binding protein BraG braG galliderm_ABC TIGR03740.1 AOI_6_18 NC_010296.1_AOI_6 gene 14995 15696 + High-affinity branched-chain amino acid transport ATP-binding protein BraG braG galliderm_ABC TIGR03740.1 AOI_6_19 NC_010296.1_AOI_6 gene 15821 17482 + NAD(P)H-quinone oxidoreductase chain 4 2 ndhD2 AOI_6_20 NC_010296.1_AOI_6 gene 18196 18390 + AOI_6_21 NC_010296.1_AOI_6 gene 18417 18833 - AOI_6_22 NC_010296.1_AOI_6 gene 19414 20520 + Signal transduction histidine-protein kinase BaeS baeS HisKA PF00512.29 AOI_6_22 NC_010296.1_AOI_6 gene 19414 20520 + Signal transduction histidine-protein kinase BaeS baeS HATPase_c_2 PF13581.10 AOI_6_23 NC_010296.1_AOI_6 gene 20818 22470 - DNA mismatch repair protein MutL mutL AOI_6_24 NC_010296.1_AOI_6 gene 22764 23972 + TnpB-like protein ORF383a 3.7 AOI_6_25 NC_010296.1_AOI_6 gene 24264 24437 + AOI_6_26 NC_010296.1_AOI_6 gene 24964 25188 + AOI_6_27 NC_010296.1_AOI_6 gene 25364 25954 + AOI_6_28 NC_010296.1_AOI_6 gene 25990 26274 + AOI_6_29 NC_010296.1_AOI_6 gene 26504 27514 + Histidine N-alpha-methyltransferase egtD AOI_6_30 NC_010296.1_AOI_6 gene 27555 28910 + Hercynine oxygenase egtB AOI_6_31 NC_010296.1_AOI_6 gene 29159 29593 + AOI_6_32 NC_010296.1_AOI_6 gene 29729 31507 + Thermophilic serine proteinase nprS Peptidase_S8 PF00082.26 AOI_6_32 NC_010296.1_AOI_6 gene 29729 31507 + Thermophilic serine proteinase nprS protease_PatA TIGR03895.1 AOI_6_33 NC_010296.1_AOI_6 gene 31490 31618 - AOI_6_34 NC_010296.1_AOI_6 gene 31758 32306 + Sporulation initiation phosphotransferase F spo0F Response_reg PF00072.28 AOI_6_35 NC_010296.1_AOI_6 gene 32804 33583 + AOI_6_36 NC_010296.1_AOI_6 gene 33580 34272 - AOI_6_37 NC_010296.1_AOI_6 gene 34311 35564 - AOI_6_38 NC_010296.1_AOI_6 gene 35655 36842 + Putative RNA-guided DNA endonuclease ysmB AOI_6_39 NC_010296.1_AOI_6 gene 36930 38180 - AOI_6_40 NC_010296.1_AOI_6 gene 38304 38558 - Sugar transporter SemiSWEET suyB AOI_6_41 NC_010296.1_AOI_6 gene 38686 39186 - Putative L,D-transpeptidase YkuD ykuC AOI_6_42 NC_010296.1_AOI_6 gene 39475 40761 + Putative RNA-guided DNA endonuclease ysmB AOI_6_43 NC_010296.1_AOI_6 gene 40856 42052 - Putative RNA-guided DNA endonuclease ysmB AOI_6_44 NC_010296.1_AOI_6 gene 42074 43009 + Linearmycin resistance ATP-binding protein LnrL lnrL ABC_tran PF00005.31 AOI_6_44 NC_010296.1_AOI_6 gene 42074 43009 + Linearmycin resistance ATP-binding protein LnrL lnrL galliderm_ABC TIGR03740.1 AOI_6_44 NC_010296.1_AOI_6 gene 42074 43009 + Linearmycin resistance ATP-binding protein LnrL lnrL galliderm_ABC TIGR03740.1 AOI_6_45 NC_010296.1_AOI_6 gene 43365 44183 + AOI_6_46 NC_010296.1_AOI_6 gene 44184 44939 + O-antigen export system ATP-binding protein RfbB rfbB ABC_tran PF00005.31 AOI_6_46 NC_010296.1_AOI_6 gene 44184 44939 + O-antigen export system ATP-binding protein RfbB rfbB galliderm_ABC TIGR03740.1 AOI_6_46 NC_010296.1_AOI_6 gene 44184 44939 + O-antigen export system ATP-binding protein RfbB rfbB galliderm_ABC TIGR03740.1 AOI_6_47 NC_010296.1_AOI_6 gene 45755 46186 + AOI_6_48 NC_010296.1_AOI_6 gene 46546 48039 - Putative thymidylate synthase thyA AOI_6_49 NC_010296.1_AOI_6 gene 48044 48667 - Thymidylate kinase tmk AOI_6_50 NC_010296.1_AOI_6 gene 48693 50078 - Mercuric reductase merA AOI_6_51 NC_010296.1_AOI_6 gene 50380 51015 - Histidine biosynthesis bifunctional protein HisIE hisI AOI_6_52 NC_010296.1_AOI_6 gene 51554 52435 - Lipopolysaccharide core biosynthesis glycosyltransferase KdtX kdtX Glycos_transf_2 PF00535.30 AOI_6_53 NC_010296.1_AOI_6 gene 52680 53411 - AOI_6_54 NC_010296.1_AOI_6 gene 53776 55434 + AOI_6_55 NC_010296.1_AOI_6 gene 56793 57404 + Uncharacterized protein MJ0014 xylS AOI_6_56 NC_010296.1_AOI_6 gene 57687 58703 + Thiamine-phosphate synthase thiE AOI_6_57 NC_010296.1_AOI_6 gene 58893 59102 + AOI_6_58 NC_010296.1_AOI_6 gene 59136 59303 - AOI_7_1 NC_010296.1_AOI_7 gene 3 1508 + Metalloprotease slr0863 sseC2 AOI_7_2 NC_010296.1_AOI_7 gene 1634 1810 - Sec-independent protein translocase protein TatA tatA AOI_7_3 NC_010296.1_AOI_7 gene 1909 3339 - Dihydrolipoyl dehydrogenase lpdA AOI_7_4 NC_010296.1_AOI_7 gene 3957 4622 - AOI_7_5 NC_010296.1_AOI_7 gene 4968 5915 + Epoxyqueuosine reductase queG AOI_7_6 NC_010296.1_AOI_7 gene 5905 6543 + Phosphoglycolate phosphatase cbbZ AOI_7_7 NC_010296.1_AOI_7 gene 6889 7128 + NAD(P)H-quinone oxidoreductase subunit L ndhL AOI_7_8 NC_010296.1_AOI_7 gene 7149 7454 + AOI_7_9 NC_010296.1_AOI_7 gene 7774 9201 + AOI_7_10 NC_010296.1_AOI_7 gene 9248 14629 + Uncharacterized WD repeat-containing protein all2124 vclB AOI_7_11 NC_010296.1_AOI_7 gene 14641 15822 - Uncharacterized protein sll1766 eep Radical_SAM PF04055.25 AOI_7_11 NC_010296.1_AOI_7 gene 14641 15822 - Uncharacterized protein sll1766 eep SPASM PF13186.10 AOI_7_11 NC_010296.1_AOI_7 gene 14641 15822 - Uncharacterized protein sll1766 eep rSAM_more_4Fe4S TIGR04085.1 AOI_7_12 NC_010296.1_AOI_7 gene 15988 16305 - AOI_7_13 NC_010296.1_AOI_7 gene 16354 16698 - AOI_7_14 NC_010296.1_AOI_7 gene 16820 17248 + Probable alpha-L-glutamate ligase rimK AOI_7_15 NC_010296.1_AOI_7 gene 17450 18877 - Unsaturated chondroitin disaccharide hydrolase ublA AOI_7_16 NC_010296.1_AOI_7 gene 18889 20700 - Stage III sporulation protein AA spoIIIAA ABC_tran PF00005.31 AOI_7_17 NC_010296.1_AOI_7 gene 20752 21753 - AOI_7_18 NC_010296.1_AOI_7 gene 22002 22232 + AOI_7_19 NC_010296.1_AOI_7 gene 22552 22857 - AOI_7_20 NC_010296.1_AOI_7 gene 22993 23574 - AOI_7_21 NC_010296.1_AOI_7 gene 23622 24593 - 5'-nucleotidase SurE surE AOI_7_22 NC_010296.1_AOI_7 gene 24602 25411 - Putative transposase R186 yosX AOI_7_23 NC_010296.1_AOI_7 gene 25508 25810 - AOI_7_24 NC_010296.1_AOI_7 gene 26078 26974 - Ribosomal protein L11 methyltransferase prmA AOI_7_25 NC_010296.1_AOI_7 gene 27108 28685 - D-3-phosphoglycerate dehydrogenase serA AOI_7_26 NC_010296.1_AOI_7 gene 29183 30739 - Acetolactate synthase large subunit ilvB AOI_8_1 NC_010296.1_AOI_8 gene 3 1310 + Potassium-transporting ATPase ATP-binding subunit kdpB Response_reg PF00072.28 AOI_8_2 NC_010296.1_AOI_8 gene 1310 2164 + Type II methyltransferase M.HindV hindVM AOI_8_3 NC_010296.1_AOI_8 gene 2268 2588 + Type II methyltransferase M.HgiDI hgiDIM AOI_8_4 NC_010296.1_AOI_8 gene 2626 3474 + AOI_8_sORF_0001 NC_010296.1_AOI_8 sORF 3775 3979 + AOI_8_5 NC_010296.1_AOI_8 gene 4151 4795 + Potassium-transporting ATPase KdpC subunit kdpC AOI_8_6 NC_010296.1_AOI_8 gene 4928 5611 - AOI_8_7 NC_010296.1_AOI_8 gene 5615 8359 - DNA topoisomerase 4 subunit A parC AOI_8_8 NC_010296.1_AOI_8 gene 8442 8846 + Chemotaxis protein CheV cheV Response_reg PF00072.28 AOI_8_9 NC_010296.1_AOI_8 gene 9090 9782 - D-alanyl-D-alanine dipeptidase ddpX AOI_8_sORF_0002 NC_010296.1_AOI_8 sORF 9807 10005 + AOI_8_10 NC_010296.1_AOI_8 gene 10080 11681 - AOI_8_11 NC_010296.1_AOI_8 gene 11705 12664 - AOI_8_12 NC_010296.1_AOI_8 gene 12936 13670 - Cyclohexanol dehydrogenase chnA AOI_8_13 NC_010296.1_AOI_8 gene 13710 14498 - Demethylmenaquinone methyltransferase menG AOI_8_14 NC_010296.1_AOI_8 gene 14998 15156 + 1.12.007 AOI_8_15 NC_010296.1_AOI_8 gene 15329 15808 - AOI_8_16 NC_010296.1_AOI_8 gene 16086 20342 - Linear gramicidin synthase subunit B lgrB AOI_8_17 NC_010296.1_AOI_8 gene 20509 34683 - Tyrocidine synthase 3 tycC AOI_8_17 NC_010296.1_AOI_8 gene 20509 34683 - Tyrocidine synthase 3 tycC AOI_8_18 NC_010296.1_AOI_8 gene 34680 37997 - Linear gramicidin synthase subunit C lgrC AOI_8_19 NC_010296.1_AOI_8 gene 38000 41308 - Linear gramicidin synthase subunit C lgrC AOI_8_sORF_0001 NC_010296.1_AOI_8 sORF 41335 41554 - AOI_8_20 NC_010296.1_AOI_8 gene 41926 43113 + Putative RNA-guided DNA endonuclease ysmB AOI_8_21 NC_010296.1_AOI_8 gene 43193 45262 + Uncharacterized ABC transporter ATP-binding protein sll0182 eep ABC_tran PF00005.31 AOI_8_21 NC_010296.1_AOI_8 gene 43193 45262 + Uncharacterized ABC transporter ATP-binding protein sll0182 eep galliderm_ABC TIGR03740.1 AOI_8_21 NC_010296.1_AOI_8 gene 43193 45262 + Uncharacterized ABC transporter ATP-binding protein sll0182 eep galliderm_ABC TIGR03740.1 AOI_8_22 NC_010296.1_AOI_8 gene 45324 46493 + AOI_8_23 NC_010296.1_AOI_8 gene 46908 48932 + AOI_8_24 NC_010296.1_AOI_8 gene 48984 49469 + AOI_8_25 NC_010296.1_AOI_8 gene 49554 51242 + AOI_8_26 NC_010296.1_AOI_8 gene 51836 52300 - AOI_8_27 NC_010296.1_AOI_8 gene 52538 53728 + Putative RNA-guided DNA endonuclease ysmB AOI_8_28 NC_010296.1_AOI_8 gene 53843 54592 - AOI_8_29 NC_010296.1_AOI_8 gene 54711 55091 - AOI_8_30 NC_010296.1_AOI_8 gene 55204 55413 - AOI_8_31 NC_010296.1_AOI_8 gene 55801 56109 + AOI_8_32 NC_010296.1_AOI_8 gene 56325 58694 + Putative sulfatase AslA aslA