{
"AOIs": [ 
{
"name": "NZ_FMYP010001211.70.AOI_01",
"filename": "/data/pg-molgen/USERS/Vicky/Genomes_Bacteroidales/Williamwhitmaniaceae/GCF_900096565.1_IMG-taxon_2654588148_annotated_assembly_genomic.fna",
"color": "gray",
"yline": 10,
"xstart": 5,
"points": [ {"x":0,"y":10}, {"x":800,"y":10} ]
}
],
"Genes": [
{
"name": "orf00004",
"orfname": "orf00004",
"gene_start": 567,
"gene_end": 1487,
"gene_strand": "-",
"real_start": 4294,
"real_end": 5214 ,
"real_strand": "+",
"name": "orf00004",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     17.7650925445425,
"motifs":    "PF14028",
"function":  "Lantibiotic biosynthesis protein ",
"annotation":"Species=Kordia algicida OT | I | <br>match=48.264%|Evalue=4.52e-99<br>UniRef:<a href=http://www.uniprot.org/uniprot/A9DQ68_9FLAO>A9DQ68_9FLAO</a>",
"protein":"MSDTLIKRSFVPGEEWVYYKFYCGAKTGDKVLEEAIIPAIERLKVNNLIDQWFFIRYADPDLHLRVRLHCSDVANIGEIIQTIYRFTQKMVEQELVWKVLLDTYQRELERYGANTMELSEQLFFFDSELFVKVLPYFRNTDGEVVRWLFALKSIDALLDSFQFSLDDKLLLLQELKSAFGKEFGMDQFLKGQLDAKFRKDRSLIEQALDSTSEKDSLIATLLNAIHEQRDVMKPIVLQILSMKQHAQLDIPFNDLMGSYIHMLVNRIFKSKQRMHEMVLYDFLYRYYKSTVARAKKHEGLAKAVKF",
"dna":"ATGAGCGATACTTTAATTAAGCGCAGTTTTGTTCCTGGTGAAGAGTGGGTTTACTATAAGTTCTACTGTGGCGCAAAAACAGGTGATAAGGTTTTAGAGGAAGCCATTATTCCTGCCATTGAACGGTTAAAAGTTAATAATTTAATTGATCAATGGTTCTTTATTCGGTATGCCGACCCTGATTTACATTTAAGAGTTCGCCTTCATTGCAGTGATGTTGCCAATATTGGCGAAATCATTCAAACTATATATCGGTTTACGCAAAAGATGGTAGAACAAGAGCTTGTATGGAAGGTTCTGCTCGATACCTACCAGCGCGAGTTGGAGCGTTATGGCGCCAATACAATGGAGTTGAGCGAGCAACTTTTCTTTTTCGATAGCGAACTATTTGTAAAGGTTCTTCCGTATTTCAGAAATACCGATGGTGAAGTTGTGCGTTGGCTTTTTGCGCTTAAATCGATTGATGCCTTGCTCGATTCTTTCCAATTCTCTCTTGATGATAAACTCCTTTTGTTGCAGGAGTTAAAATCTGCTTTTGGAAAGGAGTTTGGTATGGATCAATTTCTAAAAGGACAGTTGGATGCTAAGTTTCGTAAGGATAGAAGCCTTATAGAACAAGCGCTTGACTCCACTTCCGAAAAGGATAGTCTTATTGCTACTTTGTTAAACGCAATACATGAGCAGAGAGATGTAATGAAGCCTATTGTTCTTCAGATTTTATCAATGAAACAACATGCTCAGTTGGATATTCCCTTTAATGATCTGATGGGAAGTTATATTCATATGCTCGTAAACCGCATATTTAAATCCAAGCAACGAATGCACGAAATGGTATTGTATGATTTTTTGTATCGATACTATAAGTCAACTGTTGCTCGTGCTAAGAAACATGAAGGATTGGCAAAGGCGGTAAAGTTT",
"points": [{"x":9.80799169693825,"y":1},{"x":10.2079916969382,"y":2},{"x":25.7221933921467,"y":2},{"x":25.7221933921467,"y":0},{"x":10.2079916969382,"y":0}]}
,{
"name": "orf00005",
"orfname": "orf00005",
"gene_start": 1484,
"gene_end": 3718,
"gene_strand": "-",
"real_start": 2063,
"real_end": 4297 ,
"real_strand": "+",
"name": "orf00005",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     44.9922158796056,
"motifs":    "PF04738",
"function":  "Lantibiotic biosynthesis protein ",
"annotation":"Species=Kordia algicida OT | I | <br>match=40.811%|Evalue=0.0<br>UniRef:<a href=http://www.uniprot.org/uniprot/A9DQ66_9FLAO>A9DQ66_9FLAO</a>",
"protein":"MNDNLPYSIFSTFLVRTPLLPFNSFQNLLSNSSRLRETFRDAAKVPMINEALFVAAPEFHAQLQSWIDGGGMDAIEDERILQTLYKYISRMSSRCTPFGLFAGCTTGFVGTQTKVELSEFSEHERHTRLDMLYLCNLASALSRHDTIKPNLRYFPNTSIYKSGEHLRYIEYRYKKDKRTHHLVQVKDSLYINFVLERAKSGGRIHDLSQLLAHEGIPLLQAEDFINRLISNQILVGELDPTITGVEFFDRIQQILEPLEGIDKVNRIFADVKRKFNFIDTQIGNAPALYYDIAADLKQLNIDFDIKYLIQTDVALNAKKSSLSSETMHSVMQGIVAFNKLTDIGGSDNINQFKEAFLRRYDTREVPLLQALDVETGVGYLQGNDGVFSPLVENIILSPKVDDSPKVKWTPVQNFLLNKLLSAVESGSAEINITDDDLLQFKENWDNLPPTFTSLVRIVEAPCEQFPNGRILMENAGGNSAANLLGRFCHGNEKIYRWVSEIVDREQELFPDAIVAEIIHLPESRVGNVVLHPAFRKFEIPVITASSVCSKYTICLDDLFVSIRNGEVCLRSKRLNKRVIPRLSNAHNYSANSIPVYQFLCDLQCQGLRTWLGFNWGILKHNYPFKPRVVYKDLIFSPAEWLVKKDEIEAIMGAHDSPELLANVERWRTQRHISMYVLLEEGDNSLFIDFSNWLSVKTFLSAVKKKGNFMLREFLFNPSNAVVRSNNDMFTNEFVLGFYKQSFGK",
"dna":"ATGAACGATAACTTGCCCTATTCCATATTCTCGACGTTCTTGGTGAGAACTCCGCTGCTTCCATTCAATTCCTTTCAGAATCTCCTTTCAAATAGTTCACGGTTAAGGGAAACGTTTCGCGATGCTGCCAAGGTTCCGATGATCAATGAAGCGCTATTTGTTGCGGCACCTGAGTTTCATGCTCAGCTACAGTCTTGGATTGATGGTGGTGGTATGGATGCTATAGAAGATGAGCGCATTTTACAAACATTGTATAAGTATATATCCCGGATGTCGTCAAGATGTACACCGTTTGGCCTATTTGCCGGCTGCACTACGGGATTCGTTGGAACCCAGACCAAGGTAGAACTGTCAGAATTCTCAGAACACGAGCGGCATACCCGACTCGATATGCTGTATCTCTGCAATCTTGCTTCGGCTTTGTCTCGGCACGATACTATTAAACCGAATCTTCGCTATTTCCCCAATACTAGCATATATAAATCAGGTGAGCACCTTCGTTATATCGAATACCGCTATAAGAAAGATAAACGCACTCACCATCTTGTGCAGGTTAAGGATTCATTGTATATCAATTTTGTGCTGGAACGCGCAAAAAGCGGAGGGCGTATTCATGACTTGTCTCAGCTGCTTGCGCACGAAGGCATCCCTCTATTGCAAGCGGAAGATTTTATAAATAGATTAATAAGCAATCAGATCCTTGTTGGCGAACTCGATCCAACTATCACTGGTGTTGAATTCTTTGATAGAATCCAACAGATACTTGAGCCGCTCGAAGGTATTGATAAAGTAAACCGCATATTTGCCGATGTGAAGCGAAAGTTCAATTTCATTGACACGCAAATTGGCAATGCTCCGGCACTATATTACGATATAGCTGCTGATTTAAAGCAGCTGAATATCGACTTCGACATAAAATACCTTATTCAAACCGATGTAGCGCTCAATGCTAAAAAATCTTCGCTAAGCAGTGAAACTATGCACTCTGTAATGCAGGGTATTGTTGCGTTTAATAAGCTTACTGATATTGGCGGTTCCGACAACATAAATCAATTCAAGGAGGCATTTTTACGACGCTACGATACGCGAGAAGTGCCATTGCTTCAGGCTCTTGATGTAGAAACAGGGGTTGGCTATTTACAGGGTAACGATGGGGTGTTCTCGCCCTTGGTAGAGAACATTATACTGTCTCCCAAAGTAGATGATTCTCCCAAAGTTAAATGGACTCCTGTTCAAAATTTTCTGCTCAACAAGCTTTTGAGCGCTGTAGAAAGCGGAAGTGCCGAAATTAATATCACTGATGATGATTTACTCCAGTTTAAGGAAAATTGGGATAATTTACCCCCAACCTTCACCTCGCTTGTTAGGATAGTGGAGGCTCCTTGCGAGCAATTTCCCAATGGGCGAATTTTGATGGAAAATGCTGGTGGAAATAGTGCAGCAAATCTTTTAGGCCGGTTTTGCCATGGCAATGAGAAAATATATCGTTGGGTAAGCGAGATAGTCGACCGCGAGCAAGAATTATTCCCCGATGCCATTGTTGCTGAGATTATCCATCTTCCAGAGTCACGGGTTGGTAATGTTGTACTTCATCCTGCTTTTCGAAAATTTGAAATTCCCGTAATAACAGCATCTTCTGTTTGTTCCAAATACACTATCTGCCTCGACGATTTGTTTGTTTCCATTCGCAACGGAGAGGTTTGCTTGCGCTCCAAGAGGTTGAATAAACGTGTAATACCTCGGTTGAGCAATGCGCATAACTATTCGGCTAATTCAATTCCGGTATACCAATTCCTATGCGACTTACAATGCCAAGGTTTACGTACTTGGTTAGGATTTAACTGGGGTATTCTCAAGCACAATTATCCCTTCAAGCCCAGAGTTGTGTATAAAGACCTAATCTTTAGTCCGGCCGAATGGCTTGTGAAGAAAGATGAAATAGAGGCCATTATGGGAGCCCATGATAGCCCCGAACTGCTTGCTAATGTTGAACGATGGCGAACCCAAAGGCACATATCCATGTACGTTTTATTGGAAGAAGGCGATAATTCGTTGTTTATAGATTTTAGCAATTGGTTGAGCGTGAAAACATTTTTGTCTGCTGTAAAGAAAAAGGGAAATTTCATGTTAAGGGAATTTCTGTTCAATCCCAGCAATGCTGTGGTGAGGAGTAACAACGATATGTTTACTAATGAATTCGTTCTTGGATTCTATAAGCAATCTTTTGGGAAA",
"points": [{"x":25.6702992561841,"y":1},{"x":26.0702992561841,"y":2},{"x":64.3141325030272,"y":2},{"x":64.3141325030272,"y":0},{"x":26.0702992561841,"y":0}]}
,{
"name": "LanC",
"orfname": "orf00006",
"gene_start": 3733,
"gene_end": 4947,
"gene_strand": "-",
"real_start": 834,
"real_end": 2048 ,
"real_strand": "+",
"name": "LanC",
"color":     "#6ba3ff",
"yline":     10,
"angle":     -60,
"xtext":     75.0735166926137,
"motifs":    "PF05147",
"function":  "Lantibiotic modifying enzyme ",
"annotation":"Species=Pedobacter heparinus DSM 2366 | I | <br>match=42.473%|Evalue=7.42e-102<br>UniRef:<a href=http://www.uniprot.org/uniprot/C1Z557_PEDHE>C1Z557_PEDHE</a>",
"protein":"MDKCMVVDSLLAVQLNQKIDAIAQHIGNSTQNSPDLMSGKSGEMLFLAYYHLYKNDETKENKTTIILSSIFDEIKRGFKYPTFCNGLAGIGWTVEHLVQHNFIKADTNKIIGSLDDFLYPYMMHYIREGNYDYLHGALGLGLYYSSRKSSERAHGYLIDLVAELDRQATRMDQGIAWERKLKPDSDVRGYNLSMSHGIASIITILSRLYEAGICKDKTLELATGAVTYLLSNRRTADAKYLFPGWVCKEETEMIQGGRLAWCYYDMGISIALWQAGQLFGSERWKKEAIDILLHTTRILDLKEGGIHDAGICHGAAGIAHIYHRMYRYTNVDAFRIAAIFWFEQCIKMASFDDGLAGYKTFQVAEYGGWQKDYGLLNGIAGIGLAMISFVSDIEPDWDSALLLS",
"dna":"ATGGATAAATGCATGGTTGTAGATTCATTGCTTGCTGTACAGCTAAATCAAAAAATTGATGCAATTGCTCAGCATATAGGTAATTCTACTCAAAACTCGCCCGATCTGATGAGTGGGAAATCAGGCGAAATGCTTTTTTTGGCATACTACCATCTATATAAAAATGACGAGACAAAGGAGAATAAAACAACCATAATACTATCATCTATTTTTGATGAAATTAAGCGTGGTTTTAAATATCCAACATTTTGTAATGGTCTTGCGGGGATCGGTTGGACGGTTGAACATCTAGTACAGCATAATTTCATTAAAGCCGACACGAACAAGATCATCGGTAGCCTAGATGATTTTTTATATCCCTATATGATGCATTATATCCGTGAAGGTAATTACGATTATCTGCATGGTGCATTGGGGCTCGGCCTATACTACTCAAGCCGGAAGTCGAGTGAAAGGGCGCATGGATATCTTATCGATTTGGTTGCCGAGCTTGATAGGCAAGCCACGCGGATGGATCAGGGCATTGCTTGGGAGCGGAAGCTAAAACCCGATAGCGATGTAAGGGGGTATAACTTAAGCATGTCTCATGGCATTGCAAGCATTATTACCATTCTTAGTCGCTTATATGAGGCTGGAATTTGCAAAGACAAGACGCTCGAATTAGCAACAGGTGCTGTAACCTATTTGCTGAGTAACCGGCGAACCGCTGATGCCAAATATCTATTCCCCGGTTGGGTGTGTAAGGAGGAAACTGAAATGATACAAGGTGGTCGGTTGGCTTGGTGCTACTATGATATGGGGATTTCCATTGCTTTATGGCAAGCGGGTCAGCTATTCGGCAGTGAGCGCTGGAAGAAGGAGGCAATTGACATTCTTTTGCATACTACGCGCATCCTTGATCTAAAAGAAGGGGGCATACATGATGCTGGAATCTGCCATGGTGCTGCTGGTATAGCGCATATTTATCATCGAATGTATCGCTATACTAATGTTGATGCATTTAGGATTGCTGCCATTTTTTGGTTTGAGCAATGTATTAAGATGGCCTCTTTCGATGATGGCCTAGCCGGCTATAAAACATTTCAGGTCGCAGAATACGGTGGTTGGCAAAAAGACTATGGCCTTCTTAATGGAATTGCAGGCATTGGTCTTGCAATGATATCCTTTGTATCCGATATCGAACCCGATTGGGATAGTGCATTACTACTTAGC",
"points": [{"x":64.5736031828403,"y":1},{"x":64.9736031828403,"y":2},{"x":85.5734302023871,"y":2},{"x":85.5734302023871,"y":0},{"x":64.9736031828403,"y":0}]}
,{
"name": "sORF_3",
"orfname": "sORF_3",
"gene_start": 5010,
"gene_end": 5114,
"gene_strand": "-",
"real_start": 667,
"real_end": 771 ,
"real_strand": "+",
"name": "sORF_3",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     87.5627054142882,
"motifs":    "RBS=GACGA<br>",
"function":  "",
"annotation":"",
"protein":"LILRFLAYSNVSPLLAAGSFLFLLFCLWLFCRIRx",
"dna":"TTGATCCTAAGATTCCTTGCGTATAGTAATGTCTCCCCGTTGCTTGCAGCGGGGAGTTTTTTATTCCTACTGTTTTGTTTATGGTTATTTTGCCGAATTCGGTAG",
"points": [{"x":86.6632070576025,"y":1},{"x":87.0632070576025,"y":2},{"x":88.4622037709739,"y":2},{"x":88.4622037709739,"y":0},{"x":87.0632070576025,"y":0}]}
,{
"name": "102.1;PedA14",
"orfname": "orf00007",
"gene_start": 5089,
"gene_end": 5283,
"gene_strand": "-",
"real_start": 498,
"real_end": 692 ,
"real_strand": "+",
"name": "102.1;PedA14",
"color":     "#70c947",
"yline":     10,
"angle":     -60,
"xtext":     89.7076630340771,
"motifs":    "",
"function":  "102.1;PedA14",
"annotation":"Evalue=2.53e-06 match=48.485%;",
"protein":"MKKIEEYSKVLELSKEDVASLNNEELNSLQGGVRPTYYCTNPIYCVDTETTPRCLTIDPKIPCV",
"dna":"ATGAAAAAGATTGAAGAATATTCCAAGGTTTTGGAATTGTCAAAGGAAGATGTTGCTTCTTTGAATAACGAGGAGTTGAATAGTTTACAAGGTGGCGTTCGTCCTACCTACTATTGTACTAACCCAATTTATTGTGTTGATACAGAAACAACACCAAGGTGTTTGACGATTGATCCTAAGATTCCTTGCGTA",
"points": [{"x":88.0297526379519,"y":1},{"x":88.4297526379519,"y":2},{"x":91.3855734302024,"y":2},{"x":91.3855734302024,"y":0},{"x":88.4297526379519,"y":0}]}
,{
"name": "sORF_2",
"orfname": "sORF_2",
"gene_start": 5295,
"gene_end": 5426,
"gene_strand": "-",
"real_start": 355,
"real_end": 486 ,
"real_strand": "+",
"name": "sORF_2",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     92.7261719425705,
"motifs":    "RBS=CTAACCTGCTGCAAAAAT<br>",
"function":  "",
"annotation":"",
"protein":"VLLNMLLYCKLSPSGGAVCYYCSMACGRNLGRFRKALNRVGYYx",
"dna":"GTGTTGTTAAACATGTTGCTGTATTGCAAACTGTCACCCAGTGGCGGTGCTGTGTGTTATTATTGTAGCATGGCTTGCGGCCGCAACCTGGGCAGATTCCGAAAAGCCCTCAATAGAGTAGGATACTATTAG",
"points": [{"x":91.5931499740529,"y":1},{"x":91.9931499740529,"y":2},{"x":93.859193911088,"y":2},{"x":93.859193911088,"y":0},{"x":91.9931499740529,"y":0}]}
,{
"name": "sORF_1",
"orfname": "sORF_1",
"gene_start": 5390,
"gene_end": 5503,
"gene_strand": "+",
"real_start": 278,
"real_end": 391 ,
"real_strand": "-",
"name": "sORF_1",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     94.2138038401661,
"motifs":    "RBS=ACACAGCACCGCCACTGG<br>",
"function":  "",
"annotation":"",
"protein":"VTVCNTATCLTTHFCSRLDLMQQYLCIIRSASAANQSx",
"dna":"GTGACAGTTTGCAATACAGCAACATGTTTAACAACACATTTTTGCAGCAGGTTAGATTTAATGCAGCAATACTTATGTATTATACGGAGTGCATCTGCTGCAAATCAGTCTTAA",
"points": [{"x":93.2364642795364,"y":0},{"x":93.2364642795364,"y":2},{"x":94.7911434007957,"y":2},{"x":95.1911434007957,"y":1},{"x":94.7911434007957,"y":0}]}
,{
"name": "orf00010",
"orfname": "orf00010",
"gene_start": 5515,
"gene_end": 5688,
"gene_strand": "-",
"real_start": 93,
"real_end": 266 ,
"real_strand": "+",
"name": "orf00010",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     96.8950008649023,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MKNIEEYSKVLELSKEDVAPLNTEELNGLNGGKRKSETPCPFTAVEDCISMVVHCSE",
"dna":"ATGAAAAATATTGAAGAATATTCCAAAGTTTTGGAATTGTCGAAGGAAGATGTTGCTCCTTTGAATACTGAGGAGTTAAATGGACTTAATGGAGGTAAGCGTAAATCGGAAACTCCTTGTCCTTTTACAGCAGTAGAGGATTGCATTTCTATGGTTGTTCATTGCAGCGAA",
"points": [{"x":95.3987199446463,"y":1},{"x":95.7987199446463,"y":2},{"x":98.3912817851583,"y":2},{"x":98.3912817851583,"y":0},{"x":95.7987199446463,"y":0}]}
]}