{
"AOIs": [ 
{
"name": "NZ_NSLK010000481.228.AOI_01",
"filename": "/data/pg-molgen/USERS/Vicky/Genomes_Bacteroidales/Tannerellaceae/Tannerella_forsythia/GCF_000238215.1_ASM23821v1_genomic.fna",
"color": "gray",
"yline": 10,
"xstart": 5,
"points": [ {"x":0,"y":10}, {"x":800,"y":10} ]
}
],
"Genes": [
{
"name": "orf00002",
"orfname": "orf00002",
"gene_start": 361,
"gene_end": 1233,
"gene_strand": "-",
"real_start": 4665,
"real_end": 5537 ,
"real_strand": "+",
"name": "orf00002",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     13.5130552729739,
"motifs":    "PF14028",
"function":  "Lantibiotic biosynthesis protein ",
"annotation":"Species=Kordia algicida OT | I | <br>match=34.843%|Evalue=3.89e-62<br>UniRef:<a href=http://www.uniprot.org/uniprot/A9DQ68_9FLAO>A9DQ68_9FLAO</a>",
"protein":"MKRQRAYIPGETWVYYKLYTGIKTSDILLMKVIYPVVRELLYKGLIRSYFFIRYTDPDFHLRVRFLLRDERFMGEVMAVVKQHLRKFVNSGEVWKVQLDTYVRELERYHPLLIELSEWLFYYDSECVIQLLRRIEKEHHEEYRWMIALSLIDLLFDDFKFRIEDRSEIMIKMSDSYKKEFGFNMYNAKQFNTKYRQNRLIIESVLANTISDKRFGILYNCVLKRSKDICPIVSDIQRICNRYKINIQDLLHSYVHMSLNRLFRSRNRIHELVLYDFMKRYYNGMLARKDA",
"dna":"ATGAAACGACAGCGTGCATATATTCCGGGAGAAACATGGGTTTATTATAAACTGTATACCGGAATCAAAACAAGTGATATTCTTTTGATGAAAGTGATTTATCCTGTCGTCAGAGAGTTATTATACAAAGGATTGATACGTTCTTACTTCTTTATTCGCTATACCGATCCGGACTTTCATCTACGTGTTAGATTTTTGCTTAGGGATGAGCGTTTTATGGGTGAGGTGATGGCTGTTGTTAAACAGCATTTGAGAAAGTTTGTGAACTCCGGCGAGGTATGGAAGGTTCAATTGGATACTTATGTTCGAGAATTGGAGCGCTACCATCCATTATTAATAGAGTTGTCCGAATGGTTGTTTTATTATGACAGCGAGTGTGTTATTCAGCTGTTAAGGCGAATTGAAAAAGAACATCATGAGGAATATCGATGGATGATAGCATTATCCTTAATAGATTTATTATTTGATGATTTTAAGTTCCGTATAGAAGATCGAAGTGAGATAATGATAAAAATGAGTGATTCTTATAAAAAAGAGTTCGGTTTTAACATGTACAATGCCAAACAATTCAATACAAAATATCGTCAGAACAGGTTAATAATAGAATCTGTATTGGCCAATACGATTTCAGATAAGAGGTTTGGCATATTATATAATTGTGTATTAAAACGGAGTAAGGACATTTGTCCCATCGTTTCAGATATTCAAAGAATCTGTAATCGGTATAAGATTAATATACAAGATTTATTGCATAGCTATGTGCATATGTCTTTAAATCGATTGTTTCGTTCGAGAAATCGTATACATGAACTTGTATTGTACGATTTCATGAAGCGATATTACAATGGAATGCTTGCACGAAAAGATGCT",
"points": [{"x":6.12071888775856,"y":1},{"x":6.52071888775856,"y":2},{"x":20.9053916581892,"y":2},{"x":20.9053916581892,"y":0},{"x":6.52071888775856,"y":0}]}
,{
"name": "orf00005",
"orfname": "orf00005",
"gene_start": 1230,
"gene_end": 3416,
"gene_strand": "-",
"real_start": 2482,
"real_end": 4668 ,
"real_strand": "+",
"name": "orf00005",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     39.3862326212275,
"motifs":    "PF04738",
"function":  "Lantibiotic biosynthesis protein ",
"annotation":"Species=Kordia algicida OT | I | <br>match=37.500%|Evalue=4.34e-168<br>UniRef:<a href=http://www.uniprot.org/uniprot/A9DQ66_9FLAO>A9DQ66_9FLAO</a>",
"protein":"MYIPFNKIIIRTPRFSYQDILEKDVNFLSDKKYIDEAIYIASSDLFDEWHKYKSNQKRIIHDKEKRRISTAVVRYIYRMSTRCTPFGLFAGCSVGCIGEETSICLDDQIYRHTRLDMQYLCTLAQYISEIPEIKLRLKYHPNNSLYLIGNQYRYIEYSYRKDARKHQINSVEKSVYLRKILEAAKGGKYINELCEEIVSDGITPQIASEYINELIESQILLNELSPYVTGDDYLSYIIFLLKKLDTKHPVLSLLESVGQKLDELDKSKIFLIEKYQQIISLIKQIGAPYNEHYLFQVDMNRGVVKASLGNDIIKELQSALSFLNRITPSNEIESNLSRFAKSFQTRYESREVPILEVLDPEIGIGYPVNQEAQDLSPLIDDVRLPVETLHGEERKVYEIQHVLLEKIIDATYRKETEIVLNDTDFKQKELNWDDLPSTIHVMFELISAEKGDVLLRIKSVGGTSAANLLARFAYTDVAIEDLINQITQKEQSLNEHATFAEIAHLPDSRVGNILFRPHIRECEIVYLSNSTLSEEQKIHLSDVMISYRLGRLVLRSKKWDREMIPRLTNAHNYSRSSIPVYRFLCDMQHQGRTNLYFNWGYLEEDLDFLPRVRYKRIILSPASWRFKTADIKSFFEQDDSFLMAKIAKWKKTYNLPDYVVLPDGDNELFVNMNHINNIYALWAIVKQRTSFRLNEWLFDMKKAVVLDKQGRSYTNECIVAFSKNEKEQ",
"dna":"ATGTATATTCCATTCAACAAAATTATAATAAGAACACCCAGATTTTCGTATCAAGATATTCTTGAAAAAGATGTTAATTTTTTATCTGATAAGAAATATATTGATGAGGCTATATATATAGCCTCATCAGATTTATTTGATGAGTGGCATAAGTATAAGTCCAATCAAAAGAGGATAATTCACGATAAAGAAAAAAGGCGTATATCAACGGCAGTTGTACGATATATATATAGAATGTCTACTCGTTGTACACCCTTCGGATTATTTGCCGGTTGTTCTGTTGGTTGTATAGGGGAAGAAACTTCAATATGTTTAGATGATCAGATATACAGACATACACGATTAGATATGCAATATCTATGCACATTGGCTCAATATATATCTGAAATACCGGAAATTAAACTTCGACTTAAATATCATCCGAATAACAGTCTGTATTTAATCGGGAATCAGTATAGATATATAGAATATTCTTATAGGAAAGATGCAAGAAAGCATCAAATTAATTCTGTCGAAAAATCTGTATATTTAAGAAAGATATTAGAAGCCGCAAAAGGAGGGAAATATATTAATGAATTGTGTGAAGAGATTGTAAGCGATGGGATCACCCCACAAATAGCGTCAGAATATATTAATGAGTTAATAGAATCTCAGATACTTTTGAACGAATTGAGCCCCTACGTAACAGGAGATGATTATTTATCATATATAATTTTTTTGTTAAAGAAGCTGGATACTAAGCACCCTGTTCTTTCTTTATTAGAATCTGTTGGCCAGAAACTTGATGAGTTGGATAAAAGCAAGATTTTTCTAATAGAGAAATATCAACAAATCATATCATTGATTAAACAAATAGGTGCTCCATACAATGAACATTATCTTTTTCAGGTAGACATGAATAGGGGAGTAGTTAAAGCTTCATTAGGAAATGATATTATAAAAGAATTGCAATCTGCTCTGTCTTTTTTGAATAGAATAACCCCGTCTAATGAGATAGAATCAAACTTATCAAGATTTGCAAAGTCTTTTCAAACTCGATATGAATCCCGAGAAGTTCCTATATTAGAAGTTCTTGACCCGGAAATTGGAATTGGTTATCCTGTAAACCAGGAAGCTCAAGATCTGTCTCCGTTAATCGATGATGTAAGATTACCTGTTGAAACATTACATGGAGAAGAAAGAAAGGTGTATGAGATACAACATGTTTTACTGGAAAAAATAATTGACGCGACATATCGAAAAGAGACGGAAATCGTATTAAATGATACCGATTTTAAACAGAAAGAATTAAATTGGGATGATCTTCCAAGTACAATACATGTAATGTTTGAGCTAATTTCAGCAGAAAAGGGAGACGTATTGCTAAGAATAAAATCAGTGGGGGGAACTTCTGCTGCAAATTTATTAGCTCGCTTTGCTTATACAGATGTAGCAATAGAAGATTTGATAAATCAAATTACGCAAAAAGAGCAATCGTTAAATGAACATGCAACATTCGCAGAGATTGCTCATCTTCCAGACTCTCGGGTCGGAAATATTTTATTTCGACCACATATTCGAGAGTGTGAAATAGTTTATCTGTCAAATTCTACATTATCGGAAGAACAAAAAATCCATCTATCAGATGTAATGATTTCTTACCGTTTGGGGCGTCTTGTTTTGAGGTCGAAAAAATGGGATCGAGAAATGATTCCTCGATTGACAAATGCACATAATTATTCGAGATCTTCTATCCCTGTTTACCGCTTTTTATGCGATATGCAACATCAAGGACGCACCAATCTATATTTTAATTGGGGGTATTTGGAAGAAGATTTGGATTTTTTACCGAGAGTACGCTATAAACGAATCATATTATCTCCGGCATCATGGAGATTTAAGACAGCAGATATCAAATCCTTTTTTGAACAGGATGACTCTTTTTTAATGGCTAAAATTGCAAAATGGAAAAAGACGTATAATTTACCAGATTATGTTGTATTACCGGATGGGGATAATGAATTGTTTGTAAATATGAATCATATCAATAATATTTATGCTTTATGGGCAATCGTAAAGCAGCGAACTTCTTTTCGGTTGAATGAATGGCTATTTGACATGAAAAAAGCAGTTGTCTTAGACAAGCAGGGAAGATCATATACGAATGAGTGCATCGTAGCTTTTAGCAAAAATGAAAAAGAGCAA",
"points": [{"x":20.8545269582909,"y":1},{"x":21.2545269582909,"y":2},{"x":57.9179382841641,"y":2},{"x":57.9179382841641,"y":0},{"x":21.2545269582909,"y":0}]}
,{
"name": "LanC",
"orfname": "orf00007",
"gene_start": 3438,
"gene_end": 4646,
"gene_strand": "-",
"real_start": 1252,
"real_end": 2460 ,
"real_strand": "+",
"name": "LanC",
"color":     "#6ba3ff",
"yline":     10,
"angle":     -60,
"xtext":     68.5317056629366,
"motifs":    "PF05147",
"function":  "Lantibiotic biosynthesis protein ",
"annotation":"Species=Kordia algicida OT | I | <br>match=33.420%|Evalue=3.95e-56<br>UniRef:<a href=http://www.uniprot.org/uniprot/A9DQ65_9FLAO>A9DQ65_9FLAO</a>",
"protein":"MRELNQCEIKKSLRGIVDILDKEVLSVEGVGLLKGKGGISLLFCLYGKYMDDPYFVDRGMGILTKNIFDFIAKETKISYSLHEGLAGIGWLYEHLSREIFIEDDSNEVLQELDDYLVKVCKLINLSGNWDLLYGSLGIALYFLKRVDKKPLYANLLVEYVRDLSSWAKKEGDGIKWYSATRDYNNIEPNISFAHGASSIIAFLSKLKNKGIQDSIIDDLLISSVNFVLSNEFIPGTYKSHFPAYSLETKYKIYHSRLGWCYGDLSIAIALWQAATALQDISLKNKSISIVESTFNRKTFMETFVADACLCHGSSGIALMYIRMFFETRKTVLLENACYWIRESLEYMKNSEIDGFKFWSGREEKFVINYNLLDGLTGVGLLFLSYLILDSKTQSWDECLLLS",
"dna":"ATGAGAGAGTTGAATCAATGTGAAATTAAAAAAAGTTTGCGGGGGATTGTTGATATCTTAGATAAAGAGGTACTCAGTGTCGAGGGGGTTGGATTATTGAAAGGAAAGGGAGGGATATCATTGCTTTTTTGTTTATATGGGAAATATATGGATGACCCTTATTTTGTCGATAGGGGGATGGGAATTCTTACAAAGAATATTTTTGATTTTATTGCAAAAGAAACAAAAATATCATATTCCTTACATGAAGGTTTAGCTGGTATAGGATGGTTATACGAACATCTATCGCGAGAAATATTTATAGAGGATGATTCAAATGAAGTATTACAAGAACTTGATGATTATCTTGTTAAAGTCTGTAAATTAATTAATCTAAGTGGAAATTGGGATCTGTTATACGGAAGTTTAGGGATTGCATTATATTTTCTGAAAAGAGTAGATAAAAAGCCTTTATATGCTAATCTTTTGGTTGAATATGTAAGAGATTTGTCCTCTTGGGCAAAAAAGGAAGGTGATGGTATAAAGTGGTATTCAGCAACCAGAGATTACAATAATATTGAACCAAATATTAGTTTTGCCCATGGTGCATCTAGTATTATTGCCTTTTTATCTAAATTGAAAAATAAAGGTATTCAAGATAGTATAATTGATGATTTATTAATATCATCGGTGAATTTTGTTCTTTCCAATGAATTTATACCTGGAACCTATAAATCTCATTTTCCAGCTTATTCTCTAGAGACAAAGTATAAAATTTATCATAGTCGATTAGGTTGGTGTTATGGAGATTTAAGTATTGCTATCGCTTTATGGCAAGCGGCTACGGCTTTACAAGATATTTCTTTAAAAAATAAATCTATATCGATAGTTGAATCGACATTTAATAGAAAGACATTTATGGAAACTTTCGTTGCTGATGCCTGCTTATGTCATGGTTCTTCAGGTATTGCTTTAATGTATATAAGAATGTTTTTCGAGACAAGAAAAACAGTTCTTCTTGAAAATGCATGCTATTGGATTAGAGAGAGTCTGGAATACATGAAAAATTCTGAAATAGATGGATTTAAATTTTGGTCGGGCAGAGAAGAAAAGTTTGTAATTAACTATAATCTTTTAGATGGACTAACAGGAGTTGGGCTACTTTTTCTCTCGTATTTGATACTTGATAGTAAAACACAAAGTTGGGATGAATGCCTTTTGCTTAGT",
"points": [{"x":58.2909460834181,"y":1},{"x":58.6909460834181,"y":2},{"x":78.7724652424551,"y":2},{"x":78.7724652424551,"y":0},{"x":58.6909460834181,"y":0}]}
,{
"name": "orf00008",
"orfname": "orf00008",
"gene_start": 4693,
"gene_end": 4908,
"gene_strand": "+",
"real_start": 990,
"real_end": 1205 ,
"real_strand": "-",
"name": "orf00008",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     81.391997287216,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MQKLLKMRRRPTKKSFSTQSPLIKNQHSHPYHKVYLYNKDDYQMIKHSFQTPRRIIFLTSFSSNTPSNFIY",
"dna":"ATGCAAAAATTATTAAAAATGCGTCGCCGCCCAACAAAAAAATCATTTTCAACACAATCGCCTCTAATAAAAAACCAACATAGTCATCCTTATCATAAAGTTTACCTATATAATAAAGATGACTATCAAATGATTAAACATAGTTTTCAAACACCACGAAGGATCATATTTCTTACCTCTTTTTCATCCAATACGCCATCAAATTTCATCTAT",
"points": [{"x":79.5693455408613,"y":0},{"x":79.5693455408613,"y":2},{"x":82.8146490335707,"y":2},{"x":83.2146490335707,"y":1},{"x":82.8146490335707,"y":0}]}
,{
"name": "orf00009",
"orfname": "orf00009",
"gene_start": 4898,
"gene_end": 5245,
"gene_strand": "-",
"real_start": 653,
"real_end": 1000 ,
"real_strand": "+",
"name": "orf00009",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     85.9867751780264,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MKKHSFWVVISLLFLLVVFVYTIAVVFVSSSETVSREHAMDDIYIGGVRDIVFEDSENCIYLYINRGEEQYKMEEFRSLLLKKKAMYTYTRNKWAKAYPIQRIEYGNQLVYEFNR",
"dna":"ATGAAAAAGCATAGCTTTTGGGTTGTTATATCGTTGTTATTTCTCCTTGTTGTTTTTGTTTATACCATAGCAGTTGTTTTTGTCTCTTCAAGCGAAACTGTAAGTAGAGAACATGCCATGGATGACATTTACATAGGAGGTGTTAGAGATATAGTTTTTGAAGATTCGGAAAACTGCATTTATCTTTATATAAATAGAGGGGAAGAACAATATAAGATGGAAGAGTTTCGTTCATTATTGCTCAAAAAAAAAGCTATGTATACGTATACTCGTAATAAATGGGCGAAAGCTTATCCTATTCAGCGAATAGAATATGGCAATCAACTTGTTTATGAATTTAATAGA",
"points": [{"x":83.0451000339098,"y":1},{"x":83.4451000339098,"y":2},{"x":88.9284503221431,"y":2},{"x":88.9284503221431,"y":0},{"x":83.4451000339098,"y":0}]}
,{
"name": "orf00010",
"orfname": "orf00010",
"gene_start": 5273,
"gene_end": 5437,
"gene_strand": "-",
"real_start": 461,
"real_end": 625 ,
"real_strand": "+",
"name": "orf00010",
"color":     "#8fbcb9",
"yline":     10,
"angle":     -60,
"xtext":     90.793489318413,
"motifs":    "",
"function":  "DNA polymerase III PolC-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=polC PE=3 SV=1",
"annotation":"Species='-'<br>match=40.000%|Evalue=7.34e-04<br>UniRef:<a href=http://www.uniprot.org/uniprot/sp|Q8RA32|DPO3_CALS4>sp|Q8RA32|DPO3_CALS4</a>",
"protein":"MRQMRGGVGPSLTIECPGETMMNPLTIGPCCDVPTLSDYGCGNFTRGKYCPSCI",
"dna":"ATGAGACAAATGAGGGGAGGAGTTGGGCCAAGTTTAACGATTGAATGTCCAGGGGAAACAATGATGAATCCTCTTACGATCGGACCATGTTGTGATGTTCCGACTTTATCTGATTATGGTTGTGGAAATTTTACTAGAGGTAAATATTGTCCCTCTTGTATT",
"points": [{"x":89.4031875211936,"y":1},{"x":89.8031875211936,"y":2},{"x":92.1837911156324,"y":2},{"x":92.1837911156324,"y":0},{"x":89.8031875211936,"y":0}]}
,{
"name": "orf00011",
"orfname": "orf00011",
"gene_start": 5439,
"gene_end": 5585,
"gene_strand": "-",
"real_start": 313,
"real_end": 459 ,
"real_strand": "+",
"name": "orf00011",
"color":     "#d5dce8",
"yline":     10,
"angle":     -60,
"xtext":     93.4554086130892,
"motifs":    "",
"function":  "",
"annotation":"",
"protein":"MLPFVRKAEYKLEQEGEDNYLCSRHIKILSYEKVEKIKTKERDNCKLR",
"dna":"ATGCTACCGTTCGTTAGAAAAGCGGAGTATAAATTAGAGCAAGAGGGAGAGGATAATTATCTTTGCTCCCGACATATTAAAATTTTATCGTATGAAAAAGTTGAAAAAATTAAAACTAAGGAAAGAGACAATTGTAAACTTAGA",
"points": [{"x":92.2177009155646,"y":1},{"x":92.6177009155646,"y":2},{"x":94.6931163106138,"y":2},{"x":94.6931163106138,"y":0},{"x":92.6177009155646,"y":0}]}
]}