Command: /data/pg-molgen/software/bagel4/tools/glimmer3.02/bin/glimmer3 -C 51.5 -o 12 -g 120 -t 12 -r -l /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/NZ_JADU010000121.783.AOI_01.fna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/GLIMMER.icm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/NZ_JADU010000121.783.AOI_01 Sequence file = /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/NZ_JADU010000121.783.AOI_01.fna Number of sequences = 1 ICM model file = /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/GLIMMER.icm Excluded regions file = none List of orfs file = none Input is NOT separate orfs Independent (non-coding) scores are NOT used Circular genome = false Truncated orfs = false Minimum gene length = 120 bp Maximum overlap bases = 12 Threshold score = 12 Use first start codon = false Start codons = atg,gtg,ttg Start probs = 0.600,0.300,0.100 Stop codons = taa,tag,tga GC percentage = 51.5% >NZ_JADU010000121.783.AOI_01 Sequence length = 21125 ----- Start ----- --- Length ---- ----------- Scores ------------ ID Frame of Orf of Gene Stop of Orf of Gene Raw InFrm F1 F2 F3 R1 R2 R3 -1 237 231 91 144 138 -1.23 2 97 - - 2 - - -1 447 396 241 204 153 -3.22 0 99 - - 0 - - -3 641 524 393 246 129 -7.53 0 99 - - - - 0 -3 1058 1007 861 195 144 -5.21 0 71 - - 27 - 0 0001 +1 1 868 1128 1125 258 -0.51 99 99 - - 0 - - +3 1194 1200 1325 129 123 -4.04 0 - 99 0 0 - - 0002 -1 1329 963 724 603 237 -1.04 99 0 - - 99 - - -1 1602 1518 1330 270 186 -8.67 0 - 99 - 0 - - -1 1845 1788 1603 240 183 -4.39 4 - 95 - 4 - - -1 2037 1986 1846 189 138 -12.82 0 - 99 - 0 - - 0003 -2 2353 2338 2204 147 132 -3.76 91 - 8 - - 91 - 0004 -1 2535 2532 2383 150 147 -3.76 15 - 84 - 15 - - 0005 +2 1049 2360 2665 1614 303 -1.43 99 - 99 - - - - 0006 +3 2649 2709 3089 438 378 1.95 99 - - 99 - 0 - -2 3121 2950 2690 429 258 -4.99 0 - - 99 - 0 - 0007 +3 3276 3318 3440 162 120 1.08 54 - - 54 - 45 - 0008 -2 3478 3421 3290 186 129 -0.44 59 - - 40 - 59 - -1 3573 3573 3442 129 129 -7.93 0 0 - 0 0 - 99 +1 3370 3394 3582 210 186 -9.55 0 0 - - - - 99 +3 3441 3459 3617 174 156 -2.53 1 - - 1 - - 98 0009 -3 3785 3560 3345 438 213 -1.53 99 - - - - - 99 0010 +2 3530 3602 3799 267 195 -4.93 99 - 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