Command: /data/pg-molgen/software/bagel4/tools/glimmer3.02/bin/glimmer3 -C 51.5 -o 12 -g 120 -t 12 -r -l /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/NZ_FUXK010000061.2259.AOI_01.fna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/GLIMMER.icm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/NZ_FUXK010000061.2259.AOI_01 Sequence file = /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/NZ_FUXK010000061.2259.AOI_01.fna Number of sequences = 1 ICM model file = /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotellaveae_others.result/GLIMMER.icm Excluded regions file = none List of orfs file = none Input is NOT separate orfs Independent (non-coding) scores are NOT used Circular genome = false Truncated orfs = false Minimum gene length = 120 bp Maximum overlap bases = 12 Threshold score = 12 Use first start codon = false Start codons = atg,gtg,ttg Start probs = 0.600,0.300,0.100 Stop codons = taa,tag,tga GC percentage = 51.5% >NZ_FUXK010000061.2259.AOI_01 Sequence length = 20102 ----- Start ----- --- Length ---- ----------- Scores ------------ ID Frame of Orf of Gene Stop of Orf of Gene Raw InFrm F1 F2 F3 R1 R2 R3 +2 248 251 406 156 153 -3.92 0 99 0 - 0 - - -1 585 570 202 381 366 2.74 0 99 - - 0 - - 0001 +1 19 64 606 585 540 9.95 99 99 - - - - - -2 748 583 452 294 129 -12.96 0 99 - - 0 0 - +3 561 597 752 189 153 -6.97 0 - - 0 - 99 - 0002 +1 649 700 834 183 132 -8.47 99 99 - - - - - 0003 -2 1186 1171 1037 147 132 -9.74 87 - - 12 - 87 - +3 1041 1371 1547 504 174 -4.05 0 - - 0 - - 99 +3 1587 1599 1814 225 213 -6.74 0 - - 0 - 0 99 -2 1924 1762 1592 330 168 -11.56 0 - - 0 - 0 99 +2 1874 1883 2008 132 123 -14.84 0 - 0 0 0 - 99 -1 2025 1983 1759 264 222 -8.95 0 - - - 0 - 99 -2 2122 2080 1958 162 120 -7.62 0 - - 0 - 0 99 +3 1815 2196 2318 501 120 -4.02 0 - - 0 0 - 99 -1 2340 2250 2110 228 138 -14.39 0 - - 0 0 - 99 +1 2290 2290 2421 129 129 -1.07 0 0 - - - - 99 0004 -3 2615 2603 1110 1503 1491 14.11 99 - - - - - 99 0005 +1 2422 2515 2640 216 123 0.97 98 98 - 0 1 - - +3 2451 2499 2687 234 186 -7.04 2 - - 2 97 - - -1 2694 2544 2416 276 126 -10.07 0 - - - 0 0 99 0006 -2 2830 2782 2600 228 180 -9.16 99 - - - - 99 - +3 2766 2913 3092 324 177 -11.21 0 - 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99 - - - - 0012 -1 6768 6681 6550 216 129 -16.43 99 - - - 99 - - 0013 +1 6640 6676 6801 159 123 0.08 98 98 - - - - 1 0014 -3 6947 6752 6588 357 162 -5.76 99 - - - 0 - 99 -2 7027 6988 6854 171 132 -2.88 0 - - 99 0 0 - -1 7041 6906 6769 270 135 -12.36 0 - - 99 0 - 0 -3 7085 7070 6948 135 120 -7.55 0 - - 99 - - 0 0015 +3 6702 6708 7124 420 414 6.80 99 - - 99 - - - 0016 -3 7427 7214 7086 339 126 0.85 99 - - - - - 99 +3 7176 7323 7463 285 138 -11.51 0 0 - 0 99 0 - +3 7704 7776 7916 210 138 -14.26 0 0 - 0 99 0 - -2 7957 7900 7727 228 171 -14.14 0 0 - 0 99 0 - +2 7850 7853 7984 132 129 0.36 0 0 0 - 99 - 0 -3 8060 7961 7809 249 150 -5.37 0 0 - - 99 0 0 -3 8249 8204 8061 186 141 -6.37 0 0 - - 99 0 0 -2 8278 8245 8027 249 216 -18.40 0 0 - - 99 0 - +2 8090 8147 8335 243 186 1.83 0 0 0 - 99 - - 0017 +1 7111 7117 8472 1359 1353 -3.55 0 0 - - 99 - - +2 8408 8414 8536 126 120 -5.25 0 - 0 - 99 0 - -3 8747 8657 8445 300 210 -8.87 0 - - - 99 - 0 +1 8473 8596 8751 276 153 -5.50 0 0 0 - 99 - 0 +2 8600 8660 8857 255 195 3.61 0 - 0 - 99 0 - +3 8733 8742 8873 138 129 -10.63 0 - - 0 99 0 - -2 9028 8773 8633 393 138 -11.98 0 - 0 - 99 0 - 0018 -1 9108 9042 7291 1815 1749 12.51 99 - - - 99 - - 0019 +3 8958 8988 9137 177 147 0.06 69 - 30 69 - - 0 0020 -3 9152 9125 8838 312 285 -5.10 99 - - - - - 99 -2 9220 9160 9029 189 129 -3.71 6 - 93 - - 6 - 0021 +2 8879 9050 9262 381 210 0.99 99 - 99 - - - - +3 9285 9309 9515 228 204 -13.14 0 0 - 0 99 - 0 -2 9598 9583 9434 162 147 -17.23 0 0 - - 99 0 0 -3 9641 9404 9273 366 129 -16.60 0 0 - - 99 - 0 -2 9970 9901 9755 213 144 -8.51 0 0 - - 99 0 - +2 9767 9833 10018 249 183 1.87 0 0 0 - 99 - - -3 10037 10031 9882 153 147 -10.16 0 0 - - 99 - 0 +3 9951 9963 10175 222 210 -14.96 0 0 - 0 99 - - 0022 +1 9082 9112 10239 1155 1125 -5.84 0 0 - - 99 0 - -2 10267 10225 9971 294 252 -14.81 0 0 - - 99 0 - -3 10346 10277 10146 198 129 -11.59 0 - - - 99 - 0 +1 10339 10441 10593 252 150 -1.00 0 0 0 - 99 - - +2 10385 10385 10690 303 303 3.22 0 - 0 - 99 - - +1 10705 10741 10929 222 186 -10.77 0 0 - 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- - - 99 0032 -3 18803 18719 15492 3309 3225 12.13 99 - - - - - 99 -1 18810 18711 18556 252 153 -5.55 0 0 - - 0 - 99 +2 19067 19067 19216 147 147 -4.39 0 0 0 - - 99 0 -1 19422 19422 19279 141 141 -11.01 0 - 0 - 0 99 - +3 19398 19407 19625 225 216 -2.07 0 0 0 0 - 99 0 -3 19631 19544 19353 276 189 -10.13 0 0 0 - - 99 0 +1 19357 19369 19665 306 294 -10.76 0 0 0 - - 99 - -1 19677 19635 19489 186 144 -6.59 0 0 0 - 0 99 0 +2 19217 19298 19717 498 417 0.14 0 - 0 - - 99 - 0033 -2 19864 19771 18848 1014 921 13.38 99 - - - - 99 - +3 19653 19662 19868 213 204 -2.65 0 - - 0 - 99 - 0034 -1 20100 20097 19813 285 282 8.46 99 - - - 99 - -