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/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000031.128.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000171.14.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000171.14.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000171.14.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000171.14.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000171.14.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000171.14.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000011.151.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000011.151.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000011.151.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000011.151.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000011.151.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRBD010000011.151.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000051.160.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000051.160.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000051.160.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000051.160.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000051.160.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000051.160.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FRCJ010000011.167.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
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/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000331.17.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000331.17.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000331.17.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000331.17.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000331.17.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000331.17.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
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/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000331.17.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000331.17.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
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/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000301.24.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000021.47.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000011.48.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000011.48.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000011.48.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000011.48.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000011.48.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000011.48.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000211.4.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000211.4.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000211.4.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000211.4.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000211.4.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_JHXD010000211.4.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000071.52.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000071.52.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000071.52.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000071.52.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000071.52.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNRF010000071.52.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000051.65.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000051.65.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000051.65.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000051.65.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000051.65.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000051.65.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNUV010000011.66.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000021.68.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000031.71.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000031.71.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000031.71.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000031.71.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000031.71.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000031.71.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000081.76.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000081.76.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000081.76.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000081.76.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000081.76.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FNXC010000081.76.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FOLF010000011.80.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FOLF010000011.80.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FOLF010000011.80.PF14028.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF14028.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FOLF010000011.80.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt
/data/pg-molgen/software/bagel4/tools/hmmsearch/binaries/hmmsearch --noali --cpu 8 --domtblout /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FOLF010000011.80.PF02624.domtblout --domT 25 /data/pg-molgen/software/bagel4_2022/db_hmm/PF02624.hmm /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/NZ_FOLF010000011.80.tmp_proteins.fna >>/data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_ruminicola.result/logfile.txt