/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495691.0.fna -queryname NZ_GL3495691.0
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495691.0.fna -queryname NZ_GL3495691.0
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495691.0.fna -queryname NZ_GL3495691.0
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495691.0.AOI.fna -queryname NZ_GL3495691.0
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495691.0.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495691.0.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -queryname NZ_GL3495691.0
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -table NZ_GL3495691.0.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495781.9.fna -queryname NZ_GL3495781.9
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495781.9.fna -queryname NZ_GL3495781.9
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495781.9.fna -queryname NZ_GL3495781.9
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495771.10.fna -queryname NZ_GL3495771.10
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495771.10.fna -queryname NZ_GL3495771.10
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495771.10.fna -queryname NZ_GL3495771.10
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495841.11.fna -queryname NZ_GL3495841.11
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495841.11.fna -queryname NZ_GL3495841.11
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495841.11.fna -queryname NZ_GL3495841.11
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495871.12.fna -queryname NZ_GL3495871.12
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495871.12.fna -queryname NZ_GL3495871.12
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495871.12.fna -queryname NZ_GL3495871.12
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495821.13.fna -queryname NZ_GL3495821.13
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495821.13.fna -queryname NZ_GL3495821.13
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495821.13.fna -queryname NZ_GL3495821.13
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495831.14.fna -queryname NZ_GL3495831.14
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495831.14.fna -queryname NZ_GL3495831.14
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495831.14.fna -queryname NZ_GL3495831.14
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495801.15.fna -queryname NZ_GL3495801.15
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495801.15.fna -queryname NZ_GL3495801.15
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495801.15.fna -queryname NZ_GL3495801.15
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495641.16.fna -queryname NZ_GL3495641.16
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495641.16.fna -queryname NZ_GL3495641.16
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495641.16.fna -queryname NZ_GL3495641.16
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495731.17.fna -queryname NZ_GL3495731.17
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495731.17.fna -queryname NZ_GL3495731.17
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495731.17.fna -queryname NZ_GL3495731.17
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495791.18.fna -queryname NZ_GL3495791.18
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495791.18.fna -queryname NZ_GL3495791.18
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495791.18.fna -queryname NZ_GL3495791.18
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495721.1.fna -queryname NZ_GL3495721.1
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495721.1.fna -queryname NZ_GL3495721.1
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495721.1.fna -queryname NZ_GL3495721.1
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495721.1.AOI.fna -queryname NZ_GL3495721.1
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495721.1.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495721.1.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -queryname NZ_GL3495721.1
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -table NZ_GL3495721.1.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495811.19.fna -queryname NZ_GL3495811.19
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495811.19.fna -queryname NZ_GL3495811.19
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495811.19.fna -queryname NZ_GL3495811.19
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495861.20.fna -queryname NZ_GL3495861.20
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495861.20.fna -queryname NZ_GL3495861.20
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495861.20.fna -queryname NZ_GL3495861.20
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495651.21.fna -queryname NZ_GL3495651.21
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495651.21.fna -queryname NZ_GL3495651.21
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495651.21.fna -queryname NZ_GL3495651.21
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495751.22.fna -queryname NZ_GL3495751.22
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495751.22.fna -queryname NZ_GL3495751.22
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495751.22.fna -queryname NZ_GL3495751.22
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495661.23.fna -queryname NZ_GL3495661.23
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495661.23.fna -queryname NZ_GL3495661.23
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495661.23.fna -queryname NZ_GL3495661.23
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038921.24.fna -queryname NZ_GG7038921.24
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038921.24.fna -queryname NZ_GG7038921.24
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038921.24.fna -queryname NZ_GG7038921.24
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038901.25.fna -queryname NZ_GG7038901.25
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038901.25.fna -queryname NZ_GG7038901.25
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038901.25.fna -queryname NZ_GG7038901.25
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038891.26.fna -queryname NZ_GG7038891.26
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038891.26.fna -queryname NZ_GG7038891.26
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038891.26.fna -queryname NZ_GG7038891.26
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038881.27.fna -queryname NZ_GG7038881.27
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038881.27.fna -queryname NZ_GG7038881.27
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038881.27.fna -queryname NZ_GG7038881.27
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038831.28.fna -queryname NZ_GG7038831.28
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038831.28.fna -queryname NZ_GG7038831.28
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038831.28.fna -queryname NZ_GG7038831.28
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495741.2.fna -queryname NZ_GL3495741.2
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495741.2.fna -queryname NZ_GL3495741.2
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495741.2.fna -queryname NZ_GL3495741.2
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038911.29.fna -queryname NZ_GG7038911.29
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038911.29.fna -queryname NZ_GG7038911.29
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038911.29.fna -queryname NZ_GG7038911.29
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038851.30.fna -queryname NZ_GG7038851.30
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038851.30.fna -queryname NZ_GG7038851.30
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038851.30.fna -queryname NZ_GG7038851.30
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038871.31.fna -queryname NZ_GG7038871.31
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038871.31.fna -queryname NZ_GG7038871.31
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038871.31.fna -queryname NZ_GG7038871.31
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038861.32.fna -queryname NZ_GG7038861.32
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038861.32.fna -queryname NZ_GG7038861.32
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038861.32.fna -queryname NZ_GG7038861.32
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038861.32.AOI.fna -queryname NZ_GG7038861.32
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038861.32.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038861.32.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -queryname NZ_GG7038861.32
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -table NZ_GG7038861.32.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038841.33.fna -queryname NZ_GG7038841.33
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038841.33.fna -queryname NZ_GG7038841.33
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038841.33.fna -queryname NZ_GG7038841.33
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038941.34.fna -queryname NZ_GG7038941.34
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038941.34.fna -queryname NZ_GG7038941.34
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038941.34.fna -queryname NZ_GG7038941.34
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038931.35.fna -queryname NZ_GG7038931.35
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038931.35.fna -queryname NZ_GG7038931.35
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GG7038931.35.fna -queryname NZ_GG7038931.35
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985951.36.fna -queryname NZ_KB8985951.36
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985951.36.fna -queryname NZ_KB8985951.36
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985951.36.fna -queryname NZ_KB8985951.36
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986041.37.fna -queryname NZ_KB8986041.37
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986041.37.fna -queryname NZ_KB8986041.37
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986041.37.fna -queryname NZ_KB8986041.37
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986021.38.fna -queryname NZ_KB8986021.38
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986021.38.fna -queryname NZ_KB8986021.38
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986021.38.fna -queryname NZ_KB8986021.38
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495761.3.fna -queryname NZ_GL3495761.3
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495761.3.fna -queryname NZ_GL3495761.3
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495761.3.fna -queryname NZ_GL3495761.3
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985901.39.fna -queryname NZ_KB8985901.39
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985901.39.fna -queryname NZ_KB8985901.39
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985901.39.fna -queryname NZ_KB8985901.39
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985811.40.fna -queryname NZ_KB8985811.40
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985811.40.fna -queryname NZ_KB8985811.40
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985811.40.fna -queryname NZ_KB8985811.40
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985861.41.fna -queryname NZ_KB8985861.41
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985861.41.fna -queryname NZ_KB8985861.41
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985861.41.fna -queryname NZ_KB8985861.41
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986001.42.fna -queryname NZ_KB8986001.42
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986001.42.fna -queryname NZ_KB8986001.42
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986001.42.fna -queryname NZ_KB8986001.42
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985791.43.fna -queryname NZ_KB8985791.43
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985791.43.fna -queryname NZ_KB8985791.43
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985791.43.fna -queryname NZ_KB8985791.43
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986031.44.fna -queryname NZ_KB8986031.44
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986031.44.fna -queryname NZ_KB8986031.44
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986031.44.fna -queryname NZ_KB8986031.44
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985841.45.fna -queryname NZ_KB8985841.45
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985841.45.fna -queryname NZ_KB8985841.45
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985841.45.fna -queryname NZ_KB8985841.45
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985821.46.fna -queryname NZ_KB8985821.46
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985821.46.fna -queryname NZ_KB8985821.46
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985821.46.fna -queryname NZ_KB8985821.46
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985801.47.fna -queryname NZ_KB8985801.47
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985801.47.fna -queryname NZ_KB8985801.47
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985801.47.fna -queryname NZ_KB8985801.47
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985971.48.fna -queryname NZ_KB8985971.48
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985971.48.fna -queryname NZ_KB8985971.48
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985971.48.fna -queryname NZ_KB8985971.48
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495671.4.fna -queryname NZ_GL3495671.4
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495671.4.fna -queryname NZ_GL3495671.4
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495671.4.fna -queryname NZ_GL3495671.4
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985851.49.fna -queryname NZ_KB8985851.49
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985851.49.fna -queryname NZ_KB8985851.49
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985851.49.fna -queryname NZ_KB8985851.49
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985881.50.fna -queryname NZ_KB8985881.50
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985881.50.fna -queryname NZ_KB8985881.50
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985881.50.fna -queryname NZ_KB8985881.50
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986051.51.fna -queryname NZ_KB8986051.51
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986051.51.fna -queryname NZ_KB8986051.51
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986051.51.fna -queryname NZ_KB8986051.51
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986011.52.fna -queryname NZ_KB8986011.52
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986011.52.fna -queryname NZ_KB8986011.52
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986011.52.fna -queryname NZ_KB8986011.52
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985921.53.fna -queryname NZ_KB8985921.53
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985921.53.fna -queryname NZ_KB8985921.53
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985921.53.fna -queryname NZ_KB8985921.53
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985781.54.fna -queryname NZ_KB8985781.54
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985781.54.fna -queryname NZ_KB8985781.54
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985781.54.fna -queryname NZ_KB8985781.54
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985941.55.fna -queryname NZ_KB8985941.55
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985941.55.fna -queryname NZ_KB8985941.55
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985941.55.fna -queryname NZ_KB8985941.55
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986081.56.fna -queryname NZ_KB8986081.56
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986081.56.fna -queryname NZ_KB8986081.56
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986081.56.fna -queryname NZ_KB8986081.56
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985771.57.fna -queryname NZ_KB8985771.57
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985771.57.fna -queryname NZ_KB8985771.57
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985771.57.fna -queryname NZ_KB8985771.57
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985831.58.fna -queryname NZ_KB8985831.58
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985831.58.fna -queryname NZ_KB8985831.58
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985831.58.fna -queryname NZ_KB8985831.58
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495701.5.fna -queryname NZ_GL3495701.5
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495701.5.fna -queryname NZ_GL3495701.5
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495701.5.fna -queryname NZ_GL3495701.5
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985871.59.fna -queryname NZ_KB8985871.59
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985871.59.fna -queryname NZ_KB8985871.59
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985871.59.fna -queryname NZ_KB8985871.59
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985871.59.AOI.fna -queryname NZ_KB8985871.59
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985871.59.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985871.59.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -queryname NZ_KB8985871.59
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -table NZ_KB8985871.59.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986061.60.fna -queryname NZ_KB8986061.60
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986061.60.fna -queryname NZ_KB8986061.60
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986061.60.fna -queryname NZ_KB8986061.60
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985991.61.fna -queryname NZ_KB8985991.61
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985991.61.fna -queryname NZ_KB8985991.61
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985991.61.fna -queryname NZ_KB8985991.61
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985911.62.fna -queryname NZ_KB8985911.62
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985911.62.fna -queryname NZ_KB8985911.62
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985911.62.fna -queryname NZ_KB8985911.62
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985891.63.fna -queryname NZ_KB8985891.63
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985891.63.fna -queryname NZ_KB8985891.63
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985891.63.fna -queryname NZ_KB8985891.63
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985891.63.AOI.fna -queryname NZ_KB8985891.63
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985891.63.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985891.63.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -queryname NZ_KB8985891.63
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -table NZ_KB8985891.63.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985931.64.fna -queryname NZ_KB8985931.64
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985931.64.fna -queryname NZ_KB8985931.64
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985931.64.fna -queryname NZ_KB8985931.64
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986071.65.fna -queryname NZ_KB8986071.65
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986071.65.fna -queryname NZ_KB8986071.65
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8986071.65.fna -queryname NZ_KB8986071.65
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985981.66.fna -queryname NZ_KB8985981.66
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985981.66.fna -queryname NZ_KB8985981.66
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985981.66.fna -queryname NZ_KB8985981.66
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985961.67.fna -queryname NZ_KB8985961.67
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985961.67.fna -queryname NZ_KB8985961.67
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_KB8985961.67.fna -queryname NZ_KB8985961.67
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_LR1343841.68.fna -queryname NZ_LR1343841.68
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_LR1343841.68.fna -queryname NZ_LR1343841.68
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_LR1343841.68.fna -queryname NZ_LR1343841.68
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_annotation.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -model false -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_LR1343841.68.AOI.fna -queryname NZ_LR1343841.68
/data/pg-molgen/software/bagel4_2022/bagel4_promoterprediction.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_LR1343841.68.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_transterm.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_LR1343841.68.AOI.fna
/data/pg-molgen/software/bagel4_2022/bagel4_promoter_term_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -queryname NZ_LR1343841.68
/data/pg-molgen/software/bagel4_2022/bagel4_GeneTable_2_json.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -table NZ_LR1343841.68.GeneTables
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495681.6.fna -queryname NZ_GL3495681.6
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495681.6.fna -queryname NZ_GL3495681.6
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495681.6.fna -queryname NZ_GL3495681.6
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495851.7.fna -queryname NZ_GL3495851.7
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495851.7.fna -queryname NZ_GL3495851.7
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495851.7.fna -queryname NZ_GL3495851.7
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_hmm_rules.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495711.8.fna -queryname NZ_GL3495711.8
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_identification_blast_bacteriocins.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -translate true -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495711.8.fna -queryname NZ_GL3495711.8
/data/pg-molgen/software/bagel4_2022/bagel4_AOI_merge.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result -dna /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result/NZ_GL3495711.8.fna -queryname NZ_GL3495711.8
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result
/data/pg-molgen/software/bagel4_2022/bagel4_clean_tmpfiles.pl -s /data/pg-molgen/USERS/Vicky/Results_BAGEL4_Peregrine/Results_Prevotellaceae/Prevotella_oris.result